Definition | Polaromonas sp. JS666 chromosome, complete genome. |
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Accession | NC_007948 |
Length | 5,200,264 |
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The map label for this gene is 91788877
Identifier: 91788877
GI number: 91788877
Start: 3179557
End: 3179880
Strand: Reverse
Name: 91788877
Synonym: Bpro_3017
Alternate gene names: NA
Gene position: 3179880-3179557 (Counterclockwise)
Preceding gene: 91788878
Following gene: 91788874
Centisome position: 61.15
GC content: 68.21
Gene sequence:
>324_bases GTGCGGTTTTCTGCCCACACGGGTCGCATGCTGTTGGGTTGGCTGCTGTTGCTGGGCCCGCTCGGCGCGGCCTGCCACGC CCAGGAGGACGGCAAGCGGCTCTTCATCAGCGGCGCCACGCCGTCCTGCACGTTGTGCCACACGCTCAAGGACGCGGGCG CCGAGGGAACCGTCGGGCCGTCGCTGGACGAACTCAGGCCGGATGCCCAGCGCGTGGTCAAGGCGCTGAAGAACGGCATC GGCCAGATGCCGGCCTTCCGCACGCTTTCCGAAGAGCAGATCCAGGCGATCGCGCGCTACGTCGAGCAGGTTGCGGGCAA ATAG
Upstream 100 bases:
>100_bases TGAAGTTCAACTGGCAGGCTGAGTCCACGCCGGAAAACGCGGGCGGCTACCTCAACAGCGGTTGGCGCGTCCATGCGTTG CCGGTCACGGTGACCTGAAG
Downstream 100 bases:
>100_bases CCAGGTGTCATCCCGCCCGACACCCCGATCTCTGCGCCATTGACATAGCCGGCCTCGTCACTCGCCAGAAAAGCGTAGAT ATGGGCGATTTCCTGGGCTG
Product: sulfite dehydrogenase (cytochrome) subunit SorB
Products: NA
Alternate protein names: Cytochrome C Protein; Class I Cytochrome C; Cytochrome C Family
Number of amino acids: Translated: 107; Mature: 107
Protein sequence:
>107_residues MRFSAHTGRMLLGWLLLLGPLGAACHAQEDGKRLFISGATPSCTLCHTLKDAGAEGTVGPSLDELRPDAQRVVKALKNGI GQMPAFRTLSEEQIQAIARYVEQVAGK
Sequences:
>Translated_107_residues MRFSAHTGRMLLGWLLLLGPLGAACHAQEDGKRLFISGATPSCTLCHTLKDAGAEGTVGPSLDELRPDAQRVVKALKNGI GQMPAFRTLSEEQIQAIARYVEQVAGK >Mature_107_residues MRFSAHTGRMLLGWLLLLGPLGAACHAQEDGKRLFISGATPSCTLCHTLKDAGAEGTVGPSLDELRPDAQRVVKALKNGI GQMPAFRTLSEEQIQAIARYVEQVAGK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11444; Mature: 11444
Theoretical pI: Translated: 8.52; Mature: 8.52
Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS51007 CYTC
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRFSAHTGRMLLGWLLLLGPLGAACHAQEDGKRLFISGATPSCTLCHTLKDAGAEGTVGP CCCCCCCHHHHHHHHHHHHCCCCHHCCCCCCCEEEEECCCCCHHHHHHHHHCCCCCCCCC SLDELRPDAQRVVKALKNGIGQMPAFRTLSEEQIQAIARYVEQVAGK CHHHCCCCHHHHHHHHHHHHCCCCHHHHCCHHHHHHHHHHHHHHHCC >Mature Secondary Structure MRFSAHTGRMLLGWLLLLGPLGAACHAQEDGKRLFISGATPSCTLCHTLKDAGAEGTVGP CCCCCCCHHHHHHHHHHHHCCCCHHCCCCCCCEEEEECCCCCHHHHHHHHHCCCCCCCCC SLDELRPDAQRVVKALKNGIGQMPAFRTLSEEQIQAIARYVEQVAGK CHHHCCCCHHHHHHHHHHHHCCCCHHHHCCHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA