Definition | Polaromonas sp. JS666 chromosome, complete genome. |
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Accession | NC_007948 |
Length | 5,200,264 |
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The map label for this gene is 91788878
Identifier: 91788878
GI number: 91788878
Start: 3179883
End: 3181100
Strand: Reverse
Name: 91788878
Synonym: Bpro_3018
Alternate gene names: NA
Gene position: 3181100-3179883 (Counterclockwise)
Preceding gene: 91788880
Following gene: 91788877
Centisome position: 61.17
GC content: 69.62
Gene sequence:
>1218_bases ATGACTTCATCCTACGATCCCGGCCGCCGCAGCCTGCTGGCCGCCGGCGCAAGCGCCCTGGCGGCAGCCGGCCTGGGCGG CATGACCGATGCGAAGGCGCAGGCCGCCCCGGCGGCAACCCAGGCCCGTCCGTTGCCGCCTTATGTGAGCTGGAAAAACC CGAACAACCTGATCGTGCACACAGCCACCACCATCGAGACCAAGCGCAGCGCCTTTGGCACCAGTGTGATCACGCCGGCC GACCGCCTGTACATCCGCAACAACCTGCCGGCGCCGGACGTGTCCATCGTCGCCGACCGCGACGCCTGGACCTTGGCTGT GGAGGGCGTACGTGGGCCCCGCACGCTAAGCGTGGCCGAGCTGAAGTCGCTGGGCCTGGAGACGCTGGCCACGGTGCTGC AATGCTCGGGCAACGGCCGCGGGTACTTTGCCGACAAACCCAGCGGCACCAAGTGGCAGGTCGGTGCTGCTGGCTGCGTG ATCTGGAGCGGTGTGGCTGTGCGCACGGTGGTGGCGGCCTTGGGCGGCCTGGCCAGCGGCGGGCGGTTCATGACCGGCAC TGGCGGCGAGAGACTGCCGGACGGCCTGGACCCCAAGAGCGTGATGGTCGAGCGCTCGGTGCCGCTCTCAGCGATGGAGG ACGCGCTGCTGGCCTGGGAAATGAACGGCGAGCCGCTGCCGCACGCGCACGGCGGGCCGCTGCGCCTGGTGGTGCCCGGC TACAGCGGCGTGAACAACATCAAGTACATCAAGCAACTGGCCTTCACCGCAGCCGAGACCGACGCAGCCATCCAGAAGAC CGGCTACCGCATATCGCCGCCGGGGCAGAAGGGCGACCCCAGCCACCCGGCCGTGTGGGAGATGGACGTCAAGTCCTGGA TCAACGCGCCCGCGCCCGAGGCCGGGTCGCCCGTGCGCGCAGGCTGGGTGCAGATTCACGGCGTCGCCATGGGCGGCACG CAGGCGGTGCGGCGTGTGGACGTCTCCGTCGACGGCGGGCAGACCTGGCAGCAAGCGCGGCTGGTTGGGCCTGACCTGGG CCGCTTTGCCTGGCGCCAGTTCGTGCTGCCTGTGAAGCTGGCGCCGGGTAACTACCTGCTGGCCTCGCGCGCCCAGGACG TGAAGTTCAACTGGCAGGCTGAGTCCACGCCGGAAAACGCGGGCGGCTACCTCAACAGCGGTTGGCGCGTCCATGCGTTG CCGGTCACGGTGACCTGA
Upstream 100 bases:
>100_bases TATTTGCCAAAGTCAAGTAACTCGGTTTTCTCGCCTGCTGGGTATATGCTGGGGATGGAACAGCCGGACGGAATCGACAT CCCACAACAAGGAGACAATC
Downstream 100 bases:
>100_bases AGGTGCGGTTTTCTGCCCACACGGGTCGCATGCTGTTGGGTTGGCTGCTGTTGCTGGGCCCGCTCGGCGCGGCCTGCCAC GCCCAGGAGGACGGCAAGCG
Product: sulfite dehydrogenase (cytochrome) subunit SorA apoprotein
Products: sulfate; H2O2
Alternate protein names: Twin-Arginine Translocation Pathway Signal; SulfiteCytochrome C Oxidoreductase Subunit A; Oxidoreductase; Nitrate Reductase; Sulfite Dehydrogenase Subunit SorA Apoprotein; Membrane-Bound Oxidoreductase; Sulfite Dehydrogenase; Sulfite-Dehydrogenase; Sulfite Oxidase And ; Molybdopterin Oxidoreductase; Sulfite Dehydrogenase SoxC Protein; Sulfite Oxidase SoxC; Molybdopterin Oxidoreductase Family Protein; Sulfur Oxidation Molybdopterin C Protein; Mo-Co Oxidoreductase Dimerisation Subunit; Sulfite Dehydrogenase Subunit Sora Apoprotein; Sulfite Oxidase Molybdopterin Subunit; SulfiteCytochrome C Oxidoreductase Oxidoreductase Protein; Sulfite Oxidase-Like Oxidoreductase; Sulfite Dehydrogenase SoxC; Sulfite Oxidase-Like Protein; Sulfite Oxidase And Related S; Sulfite Dehydrogenase SoxC/D Homolog; Mo-Co Oxidoreductase Dimerisation Domain; Sulfur Oxidation Protein SoxC; Cytochrome C Dehydrogenase-Like Protein; LigA Protein; Sulfite Reductase; Molybdopterin Oxidoreductase Domain-Containing Protein; Sulfite Oxidase Or ; Oxidase; Sulfur Dehydrogenase Subunit SoxC; Cytrochrome C Oxidoreductase Subunit A; Molybdenum Containing Oxidoreductase; Putaitve Sulfite Oxidase
Number of amino acids: Translated: 405; Mature: 404
Protein sequence:
>405_residues MTSSYDPGRRSLLAAGASALAAAGLGGMTDAKAQAAPAATQARPLPPYVSWKNPNNLIVHTATTIETKRSAFGTSVITPA DRLYIRNNLPAPDVSIVADRDAWTLAVEGVRGPRTLSVAELKSLGLETLATVLQCSGNGRGYFADKPSGTKWQVGAAGCV IWSGVAVRTVVAALGGLASGGRFMTGTGGERLPDGLDPKSVMVERSVPLSAMEDALLAWEMNGEPLPHAHGGPLRLVVPG YSGVNNIKYIKQLAFTAAETDAAIQKTGYRISPPGQKGDPSHPAVWEMDVKSWINAPAPEAGSPVRAGWVQIHGVAMGGT QAVRRVDVSVDGGQTWQQARLVGPDLGRFAWRQFVLPVKLAPGNYLLASRAQDVKFNWQAESTPENAGGYLNSGWRVHAL PVTVT
Sequences:
>Translated_405_residues MTSSYDPGRRSLLAAGASALAAAGLGGMTDAKAQAAPAATQARPLPPYVSWKNPNNLIVHTATTIETKRSAFGTSVITPA DRLYIRNNLPAPDVSIVADRDAWTLAVEGVRGPRTLSVAELKSLGLETLATVLQCSGNGRGYFADKPSGTKWQVGAAGCV IWSGVAVRTVVAALGGLASGGRFMTGTGGERLPDGLDPKSVMVERSVPLSAMEDALLAWEMNGEPLPHAHGGPLRLVVPG YSGVNNIKYIKQLAFTAAETDAAIQKTGYRISPPGQKGDPSHPAVWEMDVKSWINAPAPEAGSPVRAGWVQIHGVAMGGT QAVRRVDVSVDGGQTWQQARLVGPDLGRFAWRQFVLPVKLAPGNYLLASRAQDVKFNWQAESTPENAGGYLNSGWRVHAL PVTVT >Mature_404_residues TSSYDPGRRSLLAAGASALAAAGLGGMTDAKAQAAPAATQARPLPPYVSWKNPNNLIVHTATTIETKRSAFGTSVITPAD RLYIRNNLPAPDVSIVADRDAWTLAVEGVRGPRTLSVAELKSLGLETLATVLQCSGNGRGYFADKPSGTKWQVGAAGCVI WSGVAVRTVVAALGGLASGGRFMTGTGGERLPDGLDPKSVMVERSVPLSAMEDALLAWEMNGEPLPHAHGGPLRLVVPGY SGVNNIKYIKQLAFTAAETDAAIQKTGYRISPPGQKGDPSHPAVWEMDVKSWINAPAPEAGSPVRAGWVQIHGVAMGGTQ AVRRVDVSVDGGQTWQQARLVGPDLGRFAWRQFVLPVKLAPGNYLLASRAQDVKFNWQAESTPENAGGYLNSGWRVHALP VTVT
Specific function: Unknown
COG id: COG2041
COG function: function code R; Sulfite oxidase and related enzymes
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI74099704, Length=385, Percent_Identity=31.6883116883117, Blast_Score=121, Evalue=1e-27, Organism=Homo sapiens, GI74099702, Length=385, Percent_Identity=31.6883116883117, Blast_Score=121, Evalue=1e-27, Organism=Homo sapiens, GI74099694, Length=385, Percent_Identity=31.6883116883117, Blast_Score=121, Evalue=1e-27, Organism=Caenorhabditis elegans, GI71992535, Length=361, Percent_Identity=29.9168975069252, Blast_Score=140, Evalue=1e-33, Organism=Drosophila melanogaster, GI18859905, Length=332, Percent_Identity=29.5180722891566, Blast_Score=119, Evalue=3e-27,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 1.8.3.1
Molecular weight: Translated: 42641; Mature: 42510
Theoretical pI: Translated: 9.78; Mature: 9.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSSYDPGRRSLLAAGASALAAAGLGGMTDAKAQAAPAATQARPLPPYVSWKNPNNLIVH CCCCCCCCHHHHHHHCHHHHHHHCCCCCCCCHHHCCCCCCCCCCCCCEEECCCCCCEEEE TATTIETKRSAFGTSVITPADRLYIRNNLPAPDVSIVADRDAWTLAVEGVRGPRTLSVAE EEEEEHHHHHHCCCEEECCCCEEEEECCCCCCCEEEEECCCEEEEEEECCCCCCEEEHHH LKSLGLETLATVLQCSGNGRGYFADKPSGTKWQVGAAGCVIWSGVAVRTVVAALGGLASG HHHCCHHHHHHHHHCCCCCCEEECCCCCCCEEEECCCCEEEECCHHHHHHHHHHCCCCCC GRFMTGTGGERLPDGLDPKSVMVERSVPLSAMEDALLAWEMNGEPLPHAHGGPLRLVVPG CEEEECCCCCCCCCCCCCHHEEEECCCCHHHHCCEEEEEECCCCCCCCCCCCCEEEEECC YSGVNNIKYIKQLAFTAAETDAAIQKTGYRISPPGQKGDPSHPAVWEMDVKSWINAPAPE CCCCCHHHHHHHHHHHHHHCCHHHHHCCCEECCCCCCCCCCCCEEEEEEHHHHCCCCCCC AGSPVRAGWVQIHGVAMGGTQAVRRVDVSVDGGQTWQQARLVGPDLGRFAWRQFVLPVKL CCCCCEECEEEEEEEEECCHHEEEEEEEEECCCCCHHHHEECCCCHHHHHHHHEEEEEEE APGNYLLASRAQDVKFNWQAESTPENAGGYLNSGWRVHALPVTVT CCCCEEEECCCCCEEEEEECCCCCCCCCCCCCCCCEEEEEEEEEC >Mature Secondary Structure TSSYDPGRRSLLAAGASALAAAGLGGMTDAKAQAAPAATQARPLPPYVSWKNPNNLIVH CCCCCCCHHHHHHHCHHHHHHHCCCCCCCCHHHCCCCCCCCCCCCCEEECCCCCCEEEE TATTIETKRSAFGTSVITPADRLYIRNNLPAPDVSIVADRDAWTLAVEGVRGPRTLSVAE EEEEEHHHHHHCCCEEECCCCEEEEECCCCCCCEEEEECCCEEEEEEECCCCCCEEEHHH LKSLGLETLATVLQCSGNGRGYFADKPSGTKWQVGAAGCVIWSGVAVRTVVAALGGLASG HHHCCHHHHHHHHHCCCCCCEEECCCCCCCEEEECCCCEEEECCHHHHHHHHHHCCCCCC GRFMTGTGGERLPDGLDPKSVMVERSVPLSAMEDALLAWEMNGEPLPHAHGGPLRLVVPG CEEEECCCCCCCCCCCCCHHEEEECCCCHHHHCCEEEEEECCCCCCCCCCCCCEEEEECC YSGVNNIKYIKQLAFTAAETDAAIQKTGYRISPPGQKGDPSHPAVWEMDVKSWINAPAPE CCCCCHHHHHHHHHHHHHHCCHHHHHCCCEECCCCCCCCCCCCEEEEEEHHHHCCCCCCC AGSPVRAGWVQIHGVAMGGTQAVRRVDVSVDGGQTWQQARLVGPDLGRFAWRQFVLPVKL CCCCCEECEEEEEEEEECCHHEEEEEEEEECCCCCHHHHEECCCCHHHHHHHHEEEEEEE APGNYLLASRAQDVKFNWQAESTPENAGGYLNSGWRVHALPVTVT CCCCEEEECCCCCEEEEEECCCCCCCCCCCCCCCCEEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: sulfite; O2; H2O
Specific reaction: sulfite + O2 + H2O = sulfate + H2O2
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA