Definition | Polaromonas sp. JS666 chromosome, complete genome. |
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Accession | NC_007948 |
Length | 5,200,264 |
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The map label for this gene is 91788856
Identifier: 91788856
GI number: 91788856
Start: 3155989
End: 3157266
Strand: Reverse
Name: 91788856
Synonym: Bpro_2996
Alternate gene names: NA
Gene position: 3157266-3155989 (Counterclockwise)
Preceding gene: 91788857
Following gene: 91788855
Centisome position: 60.71
GC content: 64.71
Gene sequence:
>1278_bases ATGAATGATTCGCTCAATGCCACCCACGACCCGGCGCTTCGCAGCTGGGTGACTTCCGCCAACGCGGCGGACACCGACTT TCCGATCCAGAATCTGCCCTTCGGCCGTTTTCGGCGCGTCGGCAGCGCTGAAGCCTTTCGCATCGGTGTTGCCATTGGCG ACCAGGCGCTTGATTTGAAAGCGGCCGGTCTCATCGCCACGGATGACATGAATGTGCTGATGGCCATGGGCGCTGCAGAG CGCCAGGCCCTGCGCGCAGCGATCTCTGAAGGCCTGCGCGAAGGCAGCCCAAGCCAGTCCGCATGGCTCAGCGCGCTGTT GCCGCAGGCGGGGCTTGAAATGACCTTGCCTTGCCGTATCGGCGACTACACCGACTTCTACACCGGCATTCATCACGCCA CCACCGTCGGCAAGCTGTTTCGCCCCGATGCGCCACTGTTGCCCAACTACAAGTGGGTACCGATTGGCTACCACGGCCGT GCATCGTCCATCGGGGTCAGCGGCCAGTCGTTTCCCCGACCGCTGGGCCAGACCAAAGGCCCCAACGAAGAAGTACCGGT TTTGCGGCCCAGTCACCGGATGGACTACGAGCTGGAGCTGGGCGTTTTCATGGGGCAGGGCAATGCGCCGGGCGACCGGC TCACGATGGACCAGGCGGAGGCCCACGCCTTTGGCATGGTGCTGCTCAATGACTGGTCGGCGCGCGATGTGCAGGCCTGG GAATACCAGCCGCTGGGGCCCTTCCTGGCCAAAAACTTTGCCAGCACCATCTCGCCCTGGATCGTGACGATGGAGGCCCT GGCGCCTTTTCGTGCGCCCTTCGTGCGGCCCGAGGGTGACCCGCAACCTTTGCCGTACCTCGACTCAGCAGGCAACCGGC AGCAAGGCGGTATCGACGTGGAACTCGAGGTCTGGCTGCAGACCCTGGCCATGCGCGATGCCGGCCAGGGTCCGGTGCGC CTGTCGCAGTCGAGCTTTCGCGATGCCTACTGGACAGTGGCGCAAATGATCACGCACCACACCGTGAACGGCTGCAACCT GCAGCCGGGCGACCTGTTAGGCTCCGGCACGCTGTCGGGCGCCAGGCCCGAGCAGGCTGGCTCGCTGCTGGAACTGAGTT CGGGCGGAAAGAACCCGCTGACGCTGGCCAATGGGGAAACGCGCACCTTCCTCGAAGACGGTGACTCCATCATCCTGCGC GGTTACTGCGCGCGCGCCGGTTTCCGTCGTATCGGCTTTGGCGATTGCCAGGGCCGGCTGTTGCCCGCGCGCAGCTAA
Upstream 100 bases:
>100_bases ACCTCAGCTGCTGGGCGGGCCTCAAGGATCAATTCAAGCCCTGAGTTTTCGCACGGCTCATCACCCCTTTCACGGCGCCC TGGCGTCAAGGATTTGCACC
Downstream 100 bases:
>100_bases CTGCCCGCTGATCCTGGCCCGGCGAATGCTATCGAGTTGATAGCGTATGAATCCCGTATCCATTGGGATGAAGGTTTATT CAATGGACGAGTCTGGCCCT
Product: fumarylacetoacetate hydrolase
Products: acetoacetate; fumarate
Alternate protein names: Fumarylacetoacetate Hydrolase; Hydroxylase; Fumarylacetoacetate Hydrolase Family Protein; Fumarylacetoacetase Hydrolase; LOW QUALITY PROTEIN Fumarylacetoacetase
Number of amino acids: Translated: 425; Mature: 425
Protein sequence:
>425_residues MNDSLNATHDPALRSWVTSANAADTDFPIQNLPFGRFRRVGSAEAFRIGVAIGDQALDLKAAGLIATDDMNVLMAMGAAE RQALRAAISEGLREGSPSQSAWLSALLPQAGLEMTLPCRIGDYTDFYTGIHHATTVGKLFRPDAPLLPNYKWVPIGYHGR ASSIGVSGQSFPRPLGQTKGPNEEVPVLRPSHRMDYELELGVFMGQGNAPGDRLTMDQAEAHAFGMVLLNDWSARDVQAW EYQPLGPFLAKNFASTISPWIVTMEALAPFRAPFVRPEGDPQPLPYLDSAGNRQQGGIDVELEVWLQTLAMRDAGQGPVR LSQSSFRDAYWTVAQMITHHTVNGCNLQPGDLLGSGTLSGARPEQAGSLLELSSGGKNPLTLANGETRTFLEDGDSIILR GYCARAGFRRIGFGDCQGRLLPARS
Sequences:
>Translated_425_residues MNDSLNATHDPALRSWVTSANAADTDFPIQNLPFGRFRRVGSAEAFRIGVAIGDQALDLKAAGLIATDDMNVLMAMGAAE RQALRAAISEGLREGSPSQSAWLSALLPQAGLEMTLPCRIGDYTDFYTGIHHATTVGKLFRPDAPLLPNYKWVPIGYHGR ASSIGVSGQSFPRPLGQTKGPNEEVPVLRPSHRMDYELELGVFMGQGNAPGDRLTMDQAEAHAFGMVLLNDWSARDVQAW EYQPLGPFLAKNFASTISPWIVTMEALAPFRAPFVRPEGDPQPLPYLDSAGNRQQGGIDVELEVWLQTLAMRDAGQGPVR LSQSSFRDAYWTVAQMITHHTVNGCNLQPGDLLGSGTLSGARPEQAGSLLELSSGGKNPLTLANGETRTFLEDGDSIILR GYCARAGFRRIGFGDCQGRLLPARS >Mature_425_residues MNDSLNATHDPALRSWVTSANAADTDFPIQNLPFGRFRRVGSAEAFRIGVAIGDQALDLKAAGLIATDDMNVLMAMGAAE RQALRAAISEGLREGSPSQSAWLSALLPQAGLEMTLPCRIGDYTDFYTGIHHATTVGKLFRPDAPLLPNYKWVPIGYHGR ASSIGVSGQSFPRPLGQTKGPNEEVPVLRPSHRMDYELELGVFMGQGNAPGDRLTMDQAEAHAFGMVLLNDWSARDVQAW EYQPLGPFLAKNFASTISPWIVTMEALAPFRAPFVRPEGDPQPLPYLDSAGNRQQGGIDVELEVWLQTLAMRDAGQGPVR LSQSSFRDAYWTVAQMITHHTVNGCNLQPGDLLGSGTLSGARPEQAGSLLELSSGGKNPLTLANGETRTFLEDGDSIILR GYCARAGFRRIGFGDCQGRLLPARS
Specific function: Unknown
COG id: COG0179
COG function: function code Q; 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI4557587, Length=423, Percent_Identity=46.3356973995272, Blast_Score=358, Evalue=7e-99, Organism=Caenorhabditis elegans, GI17568863, Length=421, Percent_Identity=46.3182897862233, Blast_Score=341, Evalue=5e-94, Organism=Drosophila melanogaster, GI24657182, Length=417, Percent_Identity=45.083932853717, Blast_Score=342, Evalue=2e-94,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 3.7.1.2
Molecular weight: Translated: 45961; Mature: 45961
Theoretical pI: Translated: 5.64; Mature: 5.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNDSLNATHDPALRSWVTSANAADTDFPIQNLPFGRFRRVGSAEAFRIGVAIGDQALDLK CCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCHHHHHCCCCCCEEEEEEEECCCCCCEE AAGLIATDDMNVLMAMGAAERQALRAAISEGLREGSPSQSAWLSALLPQAGLEMTLPCRI ECCEEEECCCHHHHHCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCEEECEEC GDYTDFYTGIHHATTVGKLFRPDAPLLPNYKWVPIGYHGRASSIGVSGQSFPRPLGQTKG CCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCC PNEEVPVLRPSHRMDYELELGVFMGQGNAPGDRLTMDQAEAHAFGMVLLNDWSARDVQAW CCCCCCEECCCCCCCEEEEEEEEEECCCCCCCCEEHHHHHHHEEEEEEEECCCCCCCCCC EYQPLGPFLAKNFASTISPWIVTMEALAPFRAPFVRPEGDPQPLPYLDSAGNRQQGGIDV CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEE ELEVWLQTLAMRDAGQGPVRLSQSSFRDAYWTVAQMITHHTVNGCNLQPGDLLGSGTLSG EHHHHHHHHHHHCCCCCCEEECHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC ARPEQAGSLLELSSGGKNPLTLANGETRTFLEDGDSIILRGYCARAGFRRIGFGDCQGRL CCHHHCCCEEEECCCCCCCEEECCCCCEEEECCCCEEEEEEHHHHCCCCCCCCCCCCCCE LPARS ECCCC >Mature Secondary Structure MNDSLNATHDPALRSWVTSANAADTDFPIQNLPFGRFRRVGSAEAFRIGVAIGDQALDLK CCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCHHHHHCCCCCCEEEEEEEECCCCCCEE AAGLIATDDMNVLMAMGAAERQALRAAISEGLREGSPSQSAWLSALLPQAGLEMTLPCRI ECCEEEECCCHHHHHCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCEEECEEC GDYTDFYTGIHHATTVGKLFRPDAPLLPNYKWVPIGYHGRASSIGVSGQSFPRPLGQTKG CCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCC PNEEVPVLRPSHRMDYELELGVFMGQGNAPGDRLTMDQAEAHAFGMVLLNDWSARDVQAW CCCCCCEECCCCCCCEEEEEEEEEECCCCCCCCEEHHHHHHHEEEEEEEECCCCCCCCCC EYQPLGPFLAKNFASTISPWIVTMEALAPFRAPFVRPEGDPQPLPYLDSAGNRQQGGIDV CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEE ELEVWLQTLAMRDAGQGPVRLSQSSFRDAYWTVAQMITHHTVNGCNLQPGDLLGSGTLSG EHHHHHHHHHHHCCCCCCEEECHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC ARPEQAGSLLELSSGGKNPLTLANGETRTFLEDGDSIILRGYCARAGFRRIGFGDCQGRL CCHHHCCCEEEECCCCCCCEEECCCCCEEEECCCCEEEEEEHHHHCCCCCCCCCCCCCCE LPARS ECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: 4-fumarylacetoacetate; H2O
Specific reaction: 4-fumarylacetoacetate + H2O = acetoacetate + fumarate
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA