Definition | Polaromonas sp. JS666 chromosome, complete genome. |
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Accession | NC_007948 |
Length | 5,200,264 |
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The map label for this gene is 91788737
Identifier: 91788737
GI number: 91788737
Start: 3036764
End: 3037366
Strand: Reverse
Name: 91788737
Synonym: Bpro_2876
Alternate gene names: NA
Gene position: 3037366-3036764 (Counterclockwise)
Preceding gene: 91788738
Following gene: 91788733
Centisome position: 58.41
GC content: 62.69
Gene sequence:
>603_bases ATGCCGAAACAGTCAAACCTCCCTGCCGCGCCGGAATCGAGCCCGCAATCCCTTTTGCGCAAGCGCTCGATGCGCGGGTT CACGTTGGTCGAGTTGGTGGCCGTGATCGCCATCCTGGGCATCTTGCTGGGCGTGGCTGTGCCATGGGTTGGGACCTTCG CCGACTCGATGCGGCTGACCTCACAAGCCAATGCCTATCTCTCGGCGCTGCACCTGACGCGCAGCGAGGCGATCAAACGC AACAGCAGAATGACCGTATGCAAGTCCGCTGACGGGTTGAGCTGCACGGAAGGCGGCGGCTGGCAGCAGGGCTGGATCGT CTTTCACGACCCCAACCACAATGCCGCGAAGGACGACACGGAGGTGATGGTGCATCAGTCGCCGGCCCTGCCGGCGAGCT TTCAACTGGTCGGCAATTCGAATGTTGCCACGTACGTGTCATTCGACGCCACGGGCGGCACCAGGCTTGTTTCAGGGGCT TTCCAGGCGGGCACGTTGACGTTGTGCCGGCAATCGGCGTTGAATGGCGAGGCCAGGCAGATCGTCATCAACAGCGCGGG TCGGCCCCGGGTGCAGAAAGTCGTAGTCGCCACCTGCGTTTAG
Upstream 100 bases:
>100_bases TAAATAAATAATTCTTCAGTGGTTCTATCACATTAATTAAATCTTTTTTTCATTACTTTGGAGGATGTGGGTTTAGCACA TTCTGGCTATCTTTCGGTAT
Downstream 100 bases:
>100_bases ATCGGGCAGCCCAGATCAGCGCCGGACCTCGTCCACCAGTGTCTTGAATTCGTCGATGTCTTCAAAAGACCGATAGACGC TGGCAAAGCGCACGTAGGCG
Product: methylation
Products: NA
Alternate protein names: Fimbrial Pilin Related Signal Peptide Protein; Methylation; Pilus Assembly Protein; Pre-Pilin Like Leader Sequence; Pilus Assambly Protein; Protein Involved In Methylation; Type IV Pilus Biogenesis Protein FimT; FimT Type IV Pilus Assembly Protein; Type IV Fimbrial Fimt-Related Pilin; Tfp Pilus Assembly Protein FimT
Number of amino acids: Translated: 200; Mature: 199
Protein sequence:
>200_residues MPKQSNLPAAPESSPQSLLRKRSMRGFTLVELVAVIAILGILLGVAVPWVGTFADSMRLTSQANAYLSALHLTRSEAIKR NSRMTVCKSADGLSCTEGGGWQQGWIVFHDPNHNAAKDDTEVMVHQSPALPASFQLVGNSNVATYVSFDATGGTRLVSGA FQAGTLTLCRQSALNGEARQIVINSAGRPRVQKVVVATCV
Sequences:
>Translated_200_residues MPKQSNLPAAPESSPQSLLRKRSMRGFTLVELVAVIAILGILLGVAVPWVGTFADSMRLTSQANAYLSALHLTRSEAIKR NSRMTVCKSADGLSCTEGGGWQQGWIVFHDPNHNAAKDDTEVMVHQSPALPASFQLVGNSNVATYVSFDATGGTRLVSGA FQAGTLTLCRQSALNGEARQIVINSAGRPRVQKVVVATCV >Mature_199_residues PKQSNLPAAPESSPQSLLRKRSMRGFTLVELVAVIAILGILLGVAVPWVGTFADSMRLTSQANAYLSALHLTRSEAIKRN SRMTVCKSADGLSCTEGGGWQQGWIVFHDPNHNAAKDDTEVMVHQSPALPASFQLVGNSNVATYVSFDATGGTRLVSGAF QAGTLTLCRQSALNGEARQIVINSAGRPRVQKVVVATCV
Specific function: Unknown
COG id: COG4970
COG function: function code NU; Tfp pilus assembly protein FimT
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21264; Mature: 21132
Theoretical pI: Translated: 9.80; Mature: 9.80
Prosite motif: PS00409 PROKAR_NTER_METHYL
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPKQSNLPAAPESSPQSLLRKRSMRGFTLVELVAVIAILGILLGVAVPWVGTFADSMRLT CCCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SQANAYLSALHLTRSEAIKRNSRMTVCKSADGLSCTEGGGWQQGWIVFHDPNHNAAKDDT HHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCEEEEECCCCCCCCCCC EVMVHQSPALPASFQLVGNSNVATYVSFDATGGTRLVSGAFQAGTLTLCRQSALNGEARQ EEEEECCCCCCCEEEEEECCCEEEEEEEECCCCCHHHHCCCCCCHHHHHHHHHCCCCEEE IVINSAGRPRVQKVVVATCV EEEECCCCCHHHHEEEEECC >Mature Secondary Structure PKQSNLPAAPESSPQSLLRKRSMRGFTLVELVAVIAILGILLGVAVPWVGTFADSMRLT CCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SQANAYLSALHLTRSEAIKRNSRMTVCKSADGLSCTEGGGWQQGWIVFHDPNHNAAKDDT HHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCEEEEECCCCCCCCCCC EVMVHQSPALPASFQLVGNSNVATYVSFDATGGTRLVSGAFQAGTLTLCRQSALNGEARQ EEEEECCCCCCCEEEEEECCCEEEEEEEECCCCCHHHHCCCCCCHHHHHHHHHCCCCEEE IVINSAGRPRVQKVVVATCV EEEECCCCCHHHHEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA