The gene/protein map for NC_007948 is currently unavailable.
Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

Click here to switch to the map view.

The map label for this gene is 91788737

Identifier: 91788737

GI number: 91788737

Start: 3036764

End: 3037366

Strand: Reverse

Name: 91788737

Synonym: Bpro_2876

Alternate gene names: NA

Gene position: 3037366-3036764 (Counterclockwise)

Preceding gene: 91788738

Following gene: 91788733

Centisome position: 58.41

GC content: 62.69

Gene sequence:

>603_bases
ATGCCGAAACAGTCAAACCTCCCTGCCGCGCCGGAATCGAGCCCGCAATCCCTTTTGCGCAAGCGCTCGATGCGCGGGTT
CACGTTGGTCGAGTTGGTGGCCGTGATCGCCATCCTGGGCATCTTGCTGGGCGTGGCTGTGCCATGGGTTGGGACCTTCG
CCGACTCGATGCGGCTGACCTCACAAGCCAATGCCTATCTCTCGGCGCTGCACCTGACGCGCAGCGAGGCGATCAAACGC
AACAGCAGAATGACCGTATGCAAGTCCGCTGACGGGTTGAGCTGCACGGAAGGCGGCGGCTGGCAGCAGGGCTGGATCGT
CTTTCACGACCCCAACCACAATGCCGCGAAGGACGACACGGAGGTGATGGTGCATCAGTCGCCGGCCCTGCCGGCGAGCT
TTCAACTGGTCGGCAATTCGAATGTTGCCACGTACGTGTCATTCGACGCCACGGGCGGCACCAGGCTTGTTTCAGGGGCT
TTCCAGGCGGGCACGTTGACGTTGTGCCGGCAATCGGCGTTGAATGGCGAGGCCAGGCAGATCGTCATCAACAGCGCGGG
TCGGCCCCGGGTGCAGAAAGTCGTAGTCGCCACCTGCGTTTAG

Upstream 100 bases:

>100_bases
TAAATAAATAATTCTTCAGTGGTTCTATCACATTAATTAAATCTTTTTTTCATTACTTTGGAGGATGTGGGTTTAGCACA
TTCTGGCTATCTTTCGGTAT

Downstream 100 bases:

>100_bases
ATCGGGCAGCCCAGATCAGCGCCGGACCTCGTCCACCAGTGTCTTGAATTCGTCGATGTCTTCAAAAGACCGATAGACGC
TGGCAAAGCGCACGTAGGCG

Product: methylation

Products: NA

Alternate protein names: Fimbrial Pilin Related Signal Peptide Protein; Methylation; Pilus Assembly Protein; Pre-Pilin Like Leader Sequence; Pilus Assambly Protein; Protein Involved In Methylation; Type IV Pilus Biogenesis Protein FimT; FimT Type IV Pilus Assembly Protein; Type IV Fimbrial Fimt-Related Pilin; Tfp Pilus Assembly Protein FimT

Number of amino acids: Translated: 200; Mature: 199

Protein sequence:

>200_residues
MPKQSNLPAAPESSPQSLLRKRSMRGFTLVELVAVIAILGILLGVAVPWVGTFADSMRLTSQANAYLSALHLTRSEAIKR
NSRMTVCKSADGLSCTEGGGWQQGWIVFHDPNHNAAKDDTEVMVHQSPALPASFQLVGNSNVATYVSFDATGGTRLVSGA
FQAGTLTLCRQSALNGEARQIVINSAGRPRVQKVVVATCV

Sequences:

>Translated_200_residues
MPKQSNLPAAPESSPQSLLRKRSMRGFTLVELVAVIAILGILLGVAVPWVGTFADSMRLTSQANAYLSALHLTRSEAIKR
NSRMTVCKSADGLSCTEGGGWQQGWIVFHDPNHNAAKDDTEVMVHQSPALPASFQLVGNSNVATYVSFDATGGTRLVSGA
FQAGTLTLCRQSALNGEARQIVINSAGRPRVQKVVVATCV
>Mature_199_residues
PKQSNLPAAPESSPQSLLRKRSMRGFTLVELVAVIAILGILLGVAVPWVGTFADSMRLTSQANAYLSALHLTRSEAIKRN
SRMTVCKSADGLSCTEGGGWQQGWIVFHDPNHNAAKDDTEVMVHQSPALPASFQLVGNSNVATYVSFDATGGTRLVSGAF
QAGTLTLCRQSALNGEARQIVINSAGRPRVQKVVVATCV

Specific function: Unknown

COG id: COG4970

COG function: function code NU; Tfp pilus assembly protein FimT

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21264; Mature: 21132

Theoretical pI: Translated: 9.80; Mature: 9.80

Prosite motif: PS00409 PROKAR_NTER_METHYL

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPKQSNLPAAPESSPQSLLRKRSMRGFTLVELVAVIAILGILLGVAVPWVGTFADSMRLT
CCCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SQANAYLSALHLTRSEAIKRNSRMTVCKSADGLSCTEGGGWQQGWIVFHDPNHNAAKDDT
HHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCEEEEECCCCCCCCCCC
EVMVHQSPALPASFQLVGNSNVATYVSFDATGGTRLVSGAFQAGTLTLCRQSALNGEARQ
EEEEECCCCCCCEEEEEECCCEEEEEEEECCCCCHHHHCCCCCCHHHHHHHHHCCCCEEE
IVINSAGRPRVQKVVVATCV
EEEECCCCCHHHHEEEEECC
>Mature Secondary Structure 
PKQSNLPAAPESSPQSLLRKRSMRGFTLVELVAVIAILGILLGVAVPWVGTFADSMRLT
CCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SQANAYLSALHLTRSEAIKRNSRMTVCKSADGLSCTEGGGWQQGWIVFHDPNHNAAKDDT
HHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCEEEEECCCCCCCCCCC
EVMVHQSPALPASFQLVGNSNVATYVSFDATGGTRLVSGAFQAGTLTLCRQSALNGEARQ
EEEEECCCCCCCEEEEEECCCEEEEEEEECCCCCHHHHCCCCCCHHHHHHHHHCCCCEEE
IVINSAGRPRVQKVVVATCV
EEEECCCCCHHHHEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA