Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

Click here to switch to the map view.

The map label for this gene is 91788738

Identifier: 91788738

GI number: 91788738

Start: 3037464

End: 3038042

Strand: Reverse

Name: 91788738

Synonym: Bpro_2877

Alternate gene names: NA

Gene position: 3038042-3037464 (Counterclockwise)

Preceding gene: 91788739

Following gene: 91788737

Centisome position: 58.42

GC content: 60.62

Gene sequence:

>579_bases
ATGACAAGCAAGATGGCTTTACGGCTTCAGCGATCCGCATCCGGAACGAGGGCGTCTCGCGGCTTTACCCTGATCGAGTT
GCTGGTCAGCATGACCGTGCTCGGCATTCTGGCCGCCATCGCGGTGCCGTCATTCAACGAGGCTTTCCTGAGTAACCGGC
TGGCGTCGTTCAGCAACTCCTTTATCGCGAGCGCCCAGCTCGCGCGCAGCGAGGCAATAAAGCGCAATGCCGTGGTCAAG
ATGTGCCGATCGTCCAACGGCACAAGTTGCGCGACCGCGGGCGGTTGGCAGCAGGGTTGGATCATTTTCAGCGACAACGG
CGCGGGTGGTAACGCCGACAACGGCACTGTGGACAGCGACGAGACTCGCATCTCCTATCAGCAAGCCCTTTCCACCGAGT
ATTCCTTCACGGGCAACAATTATTCGATCGCTTTCCAACCGTCGGGCCTGGTCGCTTCGACTGTCAGCCTGAACTTGTGC
CGCTTGGCGCCCTCTGCGGGATCGCAGGAGCGGACCATCGGCGTCGGCACGACGGGTCGTGTCTCGGTGAGCACGACCAG
AACCGGCATTTGCTCGTAA

Upstream 100 bases:

>100_bases
TTGGCTGTACCGGAGACTCGCCTCTCGAATCGAAGCAACCGACGACCTCGTCTTCAAGCACCATGCCCAAGGGGCGCCTC
TACTGGTACCTTGAAAAGAA

Downstream 100 bases:

>100_bases
ATAAATAATTCTTCAGTGGTTCTATCACATTAATTAAATCTTTTTTTCATTACTTTGGAGGATGTGGGTTTAGCACATTC
TGGCTATCTTTCGGTATATG

Product: methylation

Products: NA

Alternate protein names: Fimbrial Pilin Related Signal Peptide Protein; Methylation; Pre-Pilin Like Leader Sequence; Pilus Assembly Protein; Type IV Pilus Assembly Protein FimT; Tfp Pilus Assembly Protein FimT-Like Protein; Tfp Pilus Assembly Protein FimT; TypeIV Fimbrial FimT-Related Pilin; Pilus Assambly Protein; Type IV Fimbrial Biogenesis Protein; Protein Involved In Methylation; Fimbrial Biogenesis Protein; Prokaryotic N-Terminal Methylation Motif Domain Protein; Type 4 Fimbrial Biogenesis Protein FimU; Type IV Pre-Pilin; Type IV Fimbrial Fimt-Related Pilin; Type-4 Fimbrial Pilin Related Protein

Number of amino acids: Translated: 192; Mature: 191

Protein sequence:

>192_residues
MTSKMALRLQRSASGTRASRGFTLIELLVSMTVLGILAAIAVPSFNEAFLSNRLASFSNSFIASAQLARSEAIKRNAVVK
MCRSSNGTSCATAGGWQQGWIIFSDNGAGGNADNGTVDSDETRISYQQALSTEYSFTGNNYSIAFQPSGLVASTVSLNLC
RLAPSAGSQERTIGVGTTGRVSVSTTRTGICS

Sequences:

>Translated_192_residues
MTSKMALRLQRSASGTRASRGFTLIELLVSMTVLGILAAIAVPSFNEAFLSNRLASFSNSFIASAQLARSEAIKRNAVVK
MCRSSNGTSCATAGGWQQGWIIFSDNGAGGNADNGTVDSDETRISYQQALSTEYSFTGNNYSIAFQPSGLVASTVSLNLC
RLAPSAGSQERTIGVGTTGRVSVSTTRTGICS
>Mature_191_residues
TSKMALRLQRSASGTRASRGFTLIELLVSMTVLGILAAIAVPSFNEAFLSNRLASFSNSFIASAQLARSEAIKRNAVVKM
CRSSNGTSCATAGGWQQGWIIFSDNGAGGNADNGTVDSDETRISYQQALSTEYSFTGNNYSIAFQPSGLVASTVSLNLCR
LAPSAGSQERTIGVGTTGRVSVSTTRTGICS

Specific function: Unknown

COG id: COG4970

COG function: function code NU; Tfp pilus assembly protein FimT

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20084; Mature: 19953

Theoretical pI: Translated: 9.78; Mature: 9.78

Prosite motif: PS00409 PROKAR_NTER_METHYL

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSKMALRLQRSASGTRASRGFTLIELLVSMTVLGILAAIAVPSFNEAFLSNRLASFSNS
CCCHHHEEEHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
FIASAQLARSEAIKRNAVVKMCRSSNGTSCATAGGWQQGWIIFSDNGAGGNADNGTVDSD
HHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCEEEEECCCCCCCCCCCCCCCC
ETRISYQQALSTEYSFTGNNYSIAFQPSGLVASTVSLNLCRLAPSAGSQERTIGVGTTGR
HHHHHHHHHHCCCEEECCCCEEEEECCCCCEEHHHEEEEEEECCCCCCCCCEEECCCCCE
VSVSTTRTGICS
EEEECCCCCCCC
>Mature Secondary Structure 
TSKMALRLQRSASGTRASRGFTLIELLVSMTVLGILAAIAVPSFNEAFLSNRLASFSNS
CCHHHEEEHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
FIASAQLARSEAIKRNAVVKMCRSSNGTSCATAGGWQQGWIIFSDNGAGGNADNGTVDSD
HHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCEEEEECCCCCCCCCCCCCCCC
ETRISYQQALSTEYSFTGNNYSIAFQPSGLVASTVSLNLCRLAPSAGSQERTIGVGTTGR
HHHHHHHHHHCCCEEECCCCEEEEECCCCCEEHHHEEEEEEECCCCCCCCCEEECCCCCE
VSVSTTRTGICS
EEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA