Definition | Polaromonas sp. JS666 chromosome, complete genome. |
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Accession | NC_007948 |
Length | 5,200,264 |
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The map label for this gene is tilS [H]
Identifier: 91788722
GI number: 91788722
Start: 3016674
End: 3017654
Strand: Reverse
Name: tilS [H]
Synonym: Bpro_2861
Alternate gene names: 91788722
Gene position: 3017654-3016674 (Counterclockwise)
Preceding gene: 91788723
Following gene: 91788721
Centisome position: 58.03
GC content: 68.2
Gene sequence:
>981_bases GTGGCTCGTAGCGCGACGGCGCAAGGCTTACCCGAAGCGCTGGCTTCTTTCTCTCCGGGCCTGCCTTTCGCTGTAGCGCT CAGCGGCGGCGCCGATTCAACCGCCTTGCTGGTGGGCTGCGCCGAGAAATGGCCTGGTCAGGTCCGGGCCGTTCATATCC ATCACGGCCTGCAGGCTGCAGCCGACGACTTTGAACGGCACTGCCAGGCCCTGTGCGCGCAGTTGAACGTGCCGCTTGCC GTGAAACGCGTGCAGGCCCGCCATGCACCCGGGGAAAGTCCCGAGGACGCGGCCCGCAAGGCCCGTTATGCGGCTTTTGG GGCTGTTGCTCGTGAAGAATGGGCGCAGCATGCCATCAAAGACATAGCAATAGCCCAGCATGCCGATGACCAGGTTGAAA CCATGCTGCTGGCGCTGTCGCGCGGGGCAGGGCTGCCGGGGCTGGCCGCCATGCCGGCGCGGTGGGAGCGGGACGGCATC GTCTACCACCGCCCGCTGCTGGCGGTGCCCGGGGCGCTGGTGCGAGCCTGGCTGGTCGAACGGGGCTTGCCCTGGGTGGA AGATCCGACCAATACCGATGAGCGGTTCACGCGTAACCGCATTCGGGCCCGGCTGTTGCCCGCGCTGGCGGACGCCTTTC CGCAGTTCCGCGAGACCTTTGCGCGCAGTGCCCGACACGCGGCCCAGGCCCAGGCGCTGCTGGTGGAGGTGGCGCAGCAG GATCTGGCCACGGTCGGCCTGCCGCCTGCCATCACGGCCCTGCAGGGTTTGTCGCAGCCACGCCAGGCCAATGTGCTGCG CCATTGGCTGCAGCTGCAACAGGCCACACCCAGCGCGGCGCAACTCGATCAACTGCTGACGCAAGTGGCCGCCTGCACCA CCCGCGGGCACCAGATCCACCTTAAGGTGGCGACAGGCCACGTGACGCGCGTCGGCACGGTGCTGCACTACACCGCCGGG GCGGGTCAGACGGACGATTAG
Upstream 100 bases:
>100_bases GACGGCGAGACCGGCGTCCCGGTCAGCTTTGCTACGCGGCCTTTGTGGCTGCTCCGGGGCGAGGACCGGACAGGGCGCAA TGATTTCTCGGTGGGCCACC
Downstream 100 bases:
>100_bases GTAATAGCCCTAGGTATAATTAAAGGCTTTGCTGGCAGCCAAAGCCTTCCCTGCAGAATGCAGAAAGGGCATGAGAGGCC TGCAAAAAGCAGCACGCAAT
Product: tRNA(Ile)-lysidine synthetase-like protein
Products: NA
Alternate protein names: tRNA(Ile)-2-lysyl-cytidine synthase; tRNA(Ile)-lysidine synthetase [H]
Number of amino acids: Translated: 326; Mature: 325
Protein sequence:
>326_residues MARSATAQGLPEALASFSPGLPFAVALSGGADSTALLVGCAEKWPGQVRAVHIHHGLQAAADDFERHCQALCAQLNVPLA VKRVQARHAPGESPEDAARKARYAAFGAVAREEWAQHAIKDIAIAQHADDQVETMLLALSRGAGLPGLAAMPARWERDGI VYHRPLLAVPGALVRAWLVERGLPWVEDPTNTDERFTRNRIRARLLPALADAFPQFRETFARSARHAAQAQALLVEVAQQ DLATVGLPPAITALQGLSQPRQANVLRHWLQLQQATPSAAQLDQLLTQVAACTTRGHQIHLKVATGHVTRVGTVLHYTAG AGQTDD
Sequences:
>Translated_326_residues MARSATAQGLPEALASFSPGLPFAVALSGGADSTALLVGCAEKWPGQVRAVHIHHGLQAAADDFERHCQALCAQLNVPLA VKRVQARHAPGESPEDAARKARYAAFGAVAREEWAQHAIKDIAIAQHADDQVETMLLALSRGAGLPGLAAMPARWERDGI VYHRPLLAVPGALVRAWLVERGLPWVEDPTNTDERFTRNRIRARLLPALADAFPQFRETFARSARHAAQAQALLVEVAQQ DLATVGLPPAITALQGLSQPRQANVLRHWLQLQQATPSAAQLDQLLTQVAACTTRGHQIHLKVATGHVTRVGTVLHYTAG AGQTDD >Mature_325_residues ARSATAQGLPEALASFSPGLPFAVALSGGADSTALLVGCAEKWPGQVRAVHIHHGLQAAADDFERHCQALCAQLNVPLAV KRVQARHAPGESPEDAARKARYAAFGAVAREEWAQHAIKDIAIAQHADDQVETMLLALSRGAGLPGLAAMPARWERDGIV YHRPLLAVPGALVRAWLVERGLPWVEDPTNTDERFTRNRIRARLLPALADAFPQFRETFARSARHAAQAQALLVEVAQQD LATVGLPPAITALQGLSQPRQANVLRHWLQLQQATPSAAQLDQLLTQVAACTTRGHQIHLKVATGHVTRVGTVLHYTAGA GQTDD
Specific function: Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionin
COG id: COG0037
COG function: function code D; Predicted ATPase of the PP-loop superfamily implicated in cell cycle control
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the tRNA(Ile)-lysidine synthase family [H]
Homologues:
Organism=Escherichia coli, GI1786386, Length=274, Percent_Identity=40.5109489051095, Blast_Score=144, Evalue=7e-36,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012094 - InterPro: IPR012795 - InterPro: IPR015262 - InterPro: IPR014729 - InterPro: IPR011063 [H]
Pfam domain/function: PF01171 ATP_bind_3; PF09179 DUF1946 [H]
EC number: NA
Molecular weight: Translated: 34994; Mature: 34863
Theoretical pI: Translated: 8.38; Mature: 8.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARSATAQGLPEALASFSPGLPFAVALSGGADSTALLVGCAEKWPGQVRAVHIHHGLQAA CCCCCCCCCHHHHHHHCCCCCCEEEEECCCCCCCEEEEECHHHCCCCEEEEEEHHCHHHH ADDFERHCQALCAQLNVPLAVKRVQARHAPGESPEDAARKARYAAFGAVAREEWAQHAIK HHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH DIAIAQHADDQVETMLLALSRGAGLPGLAAMPARWERDGIVYHRPLLAVPGALVRAWLVE HHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEECHHHHCCHHHHHHHHHH RGLPWVEDPTNTDERFTRNRIRARLLPALADAFPQFRETFARSARHAAQAQALLVEVAQQ CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DLATVGLPPAITALQGLSQPRQANVLRHWLQLQQATPSAAQLDQLLTQVAACTTRGHQIH HHHHCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCEEE LKVATGHVTRVGTVLHYTAGAGQTDD EEEECCCHHHHHHHHEEECCCCCCCC >Mature Secondary Structure ARSATAQGLPEALASFSPGLPFAVALSGGADSTALLVGCAEKWPGQVRAVHIHHGLQAA CCCCCCCCHHHHHHHCCCCCCEEEEECCCCCCCEEEEECHHHCCCCEEEEEEHHCHHHH ADDFERHCQALCAQLNVPLAVKRVQARHAPGESPEDAARKARYAAFGAVAREEWAQHAIK HHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH DIAIAQHADDQVETMLLALSRGAGLPGLAAMPARWERDGIVYHRPLLAVPGALVRAWLVE HHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEECHHHHCCHHHHHHHHHH RGLPWVEDPTNTDERFTRNRIRARLLPALADAFPQFRETFARSARHAAQAQALLVEVAQQ CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DLATVGLPPAITALQGLSQPRQANVLRHWLQLQQATPSAAQLDQLLTQVAACTTRGHQIH HHHHCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCEEE LKVATGHVTRVGTVLHYTAGAGQTDD EEEECCCHHHHHHHHEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA