Definition | Polaromonas sp. JS666 chromosome, complete genome. |
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Accession | NC_007948 |
Length | 5,200,264 |
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The map label for this gene is crp [C]
Identifier: 91788661
GI number: 91788661
Start: 2940117
End: 2940725
Strand: Reverse
Name: crp [C]
Synonym: Bpro_2799
Alternate gene names: 91788661
Gene position: 2940725-2940117 (Counterclockwise)
Preceding gene: 91788668
Following gene: 91788656
Centisome position: 56.55
GC content: 57.96
Gene sequence:
>609_bases ATGTCATCCATACAAAACCATCCTGAGAGAAACGTCATTCGCGTCCAGCTGGCGCAGAACATCGTTCTGAAGGGAATGAC CGCAGAGCAAAGCGCTGAACTTGAGTCACACCTGGTCATTGTTGACTGCCAGAAGGGGGAGACGCTCCTGCATCAGGGGG CGCACGAGATGGAGCAGTATTTCATCCTGGAGGGCATCCTGAAGCGGGTTGTGACCAATCAGGAGGCCAAGGAGATGATT CTTCGTTTCGCCGATGAGCGTGACATGGAAACCAGCTACGCAGCCTGGCGGCTGGGTACGCCCACGCCTTACAGCACCGT TTGCGTGACCAAGGTGCGGGTGGCCAAGCTGCCGCTGCCAGAGTGGGTGGTGTTTCTGGAGCGCCACCACGAGATCAAGA AATCCTTCGAGTATTACGTCATGCAGCTGATGAGCGAGATCATGGCCCACACCATCACGCTGCACCTGCTTGACGCACCG GGTCGGGTACAGCGCTTCCTGCGCAAGCATCCCGAGCTGTTTGACCGCATTCCCAAGAAGGAGCTGGCGTCCTACCTGAA CCTGTCGGCGGAAACCCTGAGCCGGCTCAAGCAGCGCGGCAAGATCTGA
Upstream 100 bases:
>100_bases AGGAATTGATCCGGTTCTCACCATTGACCACGGTCAATTTTCGCTGTATTCGAATTACGCGAAAGGATGAAGACTGCATT TCTCCTACCCTAACGTATTC
Downstream 100 bases:
>100_bases GCCGGAACTCGTCATTGCGGGCTTGACATGGCTTGACCTGCATCCATGCTCCCCGGCTGTCATGCCGGACTCGATCCGGC ATCCATGAATTCAGGGGGTC
Product: cyclic nucleotide-binding domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 202; Mature: 201
Protein sequence:
>202_residues MSSIQNHPERNVIRVQLAQNIVLKGMTAEQSAELESHLVIVDCQKGETLLHQGAHEMEQYFILEGILKRVVTNQEAKEMI LRFADERDMETSYAAWRLGTPTPYSTVCVTKVRVAKLPLPEWVVFLERHHEIKKSFEYYVMQLMSEIMAHTITLHLLDAP GRVQRFLRKHPELFDRIPKKELASYLNLSAETLSRLKQRGKI
Sequences:
>Translated_202_residues MSSIQNHPERNVIRVQLAQNIVLKGMTAEQSAELESHLVIVDCQKGETLLHQGAHEMEQYFILEGILKRVVTNQEAKEMI LRFADERDMETSYAAWRLGTPTPYSTVCVTKVRVAKLPLPEWVVFLERHHEIKKSFEYYVMQLMSEIMAHTITLHLLDAP GRVQRFLRKHPELFDRIPKKELASYLNLSAETLSRLKQRGKI >Mature_201_residues SSIQNHPERNVIRVQLAQNIVLKGMTAEQSAELESHLVIVDCQKGETLLHQGAHEMEQYFILEGILKRVVTNQEAKEMIL RFADERDMETSYAAWRLGTPTPYSTVCVTKVRVAKLPLPEWVVFLERHHEIKKSFEYYVMQLMSEIMAHTITLHLLDAPG RVQRFLRKHPELFDRIPKKELASYLNLSAETLSRLKQRGKI
Specific function: This Protein Complexes With Cyclic AMP And Binds To Specific DNA Sites Near The Promoter To Regulate The Transcription Of Several Catabolite-Sensitive Operons. The Protein Induces A Severe Bend In The DNA. Acts As A Negative Regulator Of Its Own Synthesi
COG id: COG0664
COG function: function code T; cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23465; Mature: 23333
Theoretical pI: Translated: 8.68; Mature: 8.68
Prosite motif: PS50042 CNMP_BINDING_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSIQNHPERNVIRVQLAQNIVLKGMTAEQSAELESHLVIVDCQKGETLLHQGAHEMEQY CCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHCEEEEECCCCHHHHHCCHHHHHHH FILEGILKRVVTNQEAKEMILRFADERDMETSYAAWRLGTPTPYSTVCVTKVRVAKLPLP HHHHHHHHHHHCCHHHHHHHHHHHCCCCCCHHHHHEECCCCCCCHHHHHHHHHHHHCCCH EWVVFLERHHEIKKSFEYYVMQLMSEIMAHTITLHLLDAPGRVQRFLRKHPELFDRIPKK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCHHHHHHHHHCHHHHHHCCHH ELASYLNLSAETLSRLKQRGKI HHHHHHCCCHHHHHHHHHCCCC >Mature Secondary Structure SSIQNHPERNVIRVQLAQNIVLKGMTAEQSAELESHLVIVDCQKGETLLHQGAHEMEQY CCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHCEEEEECCCCHHHHHCCHHHHHHH FILEGILKRVVTNQEAKEMILRFADERDMETSYAAWRLGTPTPYSTVCVTKVRVAKLPLP HHHHHHHHHHHCCHHHHHHHHHHHCCCCCCHHHHHEECCCCCCCHHHHHHHHHHHHCCCH EWVVFLERHHEIKKSFEYYVMQLMSEIMAHTITLHLLDAPGRVQRFLRKHPELFDRIPKK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCHHHHHHHHHCHHHHHHCCHH ELASYLNLSAETLSRLKQRGKI HHHHHHCCCHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: DNA [C]
Specific reaction: Protein + DNA = Protein-DNA [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA