Definition | Polaromonas sp. JS666 chromosome, complete genome. |
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Accession | NC_007948 |
Length | 5,200,264 |
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The map label for this gene is 91788656
Identifier: 91788656
GI number: 91788656
Start: 2934664
End: 2935560
Strand: Reverse
Name: 91788656
Synonym: Bpro_2794
Alternate gene names: NA
Gene position: 2935560-2934664 (Counterclockwise)
Preceding gene: 91788661
Following gene: 91788652
Centisome position: 56.45
GC content: 60.2
Gene sequence:
>897_bases ATGAAAAAGCTGTTGCTGCTGGCTGGCACGTTGCTCTGTGGGGTGCAGGTTCATGCGCAGTCCTGTGAAGGCGGCCTGTA CCTCAATCCGCAGGTCATTCGCGGTGAGGGATCGTCTCAAACTGAAAGTGCGCTCAAGGAACTGATCGAGTTTGTCCGGC CTGCCGGGCTATCGGTCTCGCCGGTTCTCAACATCAGGGAAACCCAGGACGTCCTTACGGCCGTCAAGCGGCCAGCGCCT CCGTGCTGGGTCTACGGCAACCCGGTCGTGGGCCTGGCCTCGGGTTATCGCCCCGTGGCGATCAACATGGAACCGATCCA GTCGGCAGTGCTTATTCTTGCGGACATCGGTTCGGTGAAGGATGGCAAGCCGGTCGAATTGAAGAACTTGCCCATTGACG AGCAGGCGAAGATACTCGCCAGGCTCAAGGCCACCAGCTGCTTTGGCATGAAAAGCGGCGTCACCACCACGCTGGTGAAG GCTGAAAATCTTTGCGGCACGGTGGTCGAAGTGATGCCCCAGCAAGGTTTGGGGCAGAGCTATCTGCCCACCAAGGCAGC CTTTCACTGGCAGGCGGACCGGTGGGTGGGCCTGATCACCCGGCTTCAGACCGCCCAGGCTTCCACCATGAAGAACCACT ACGGCACCGACGAGCGGATTCATCTGGCGCGGCTGGTGGTCGTGCCTGCAGCCAATCCCAGCTGGGGTTACGGCATCTAT GTCCATCCCGACGTTCCGGGTGACGCGTTGAAAAAGGTCGCCAACCAGTTCACGTCCCTCAAGACAAGCAATCCCTCGCT GCTGCGGGCATTGGACCTGGGCAGCAAATACGAGTTCGCCACGCCCTCCGAAAAATCCGTCCAGGCAATGAAGCTGTCGC TGGGTACAGCGCCCTGA
Upstream 100 bases:
>100_bases TTAGTCGCACCCGCATTACCATGAGCACGAACACGAGCAGAGGGCTGGCACCCTTGCCGTGAGGTGGGGATGAAACGCGT TTTGACAAGGGTGAAAAACG
Downstream 100 bases:
>100_bases ACAAGATTTTCCTGTGATGTTTGCCGGGCTGGTGGATTAGCCATCCAGGCCTGCGGGCGCAGGACCGAATGGCGGGGATG TTGCCGCCTGGCGCAGCCTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 298; Mature: 298
Protein sequence:
>298_residues MKKLLLLAGTLLCGVQVHAQSCEGGLYLNPQVIRGEGSSQTESALKELIEFVRPAGLSVSPVLNIRETQDVLTAVKRPAP PCWVYGNPVVGLASGYRPVAINMEPIQSAVLILADIGSVKDGKPVELKNLPIDEQAKILARLKATSCFGMKSGVTTTLVK AENLCGTVVEVMPQQGLGQSYLPTKAAFHWQADRWVGLITRLQTAQASTMKNHYGTDERIHLARLVVVPAANPSWGYGIY VHPDVPGDALKKVANQFTSLKTSNPSLLRALDLGSKYEFATPSEKSVQAMKLSLGTAP
Sequences:
>Translated_298_residues MKKLLLLAGTLLCGVQVHAQSCEGGLYLNPQVIRGEGSSQTESALKELIEFVRPAGLSVSPVLNIRETQDVLTAVKRPAP PCWVYGNPVVGLASGYRPVAINMEPIQSAVLILADIGSVKDGKPVELKNLPIDEQAKILARLKATSCFGMKSGVTTTLVK AENLCGTVVEVMPQQGLGQSYLPTKAAFHWQADRWVGLITRLQTAQASTMKNHYGTDERIHLARLVVVPAANPSWGYGIY VHPDVPGDALKKVANQFTSLKTSNPSLLRALDLGSKYEFATPSEKSVQAMKLSLGTAP >Mature_298_residues MKKLLLLAGTLLCGVQVHAQSCEGGLYLNPQVIRGEGSSQTESALKELIEFVRPAGLSVSPVLNIRETQDVLTAVKRPAP PCWVYGNPVVGLASGYRPVAINMEPIQSAVLILADIGSVKDGKPVELKNLPIDEQAKILARLKATSCFGMKSGVTTTLVK AENLCGTVVEVMPQQGLGQSYLPTKAAFHWQADRWVGLITRLQTAQASTMKNHYGTDERIHLARLVVVPAANPSWGYGIY VHPDVPGDALKKVANQFTSLKTSNPSLLRALDLGSKYEFATPSEKSVQAMKLSLGTAP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32011; Mature: 32011
Theoretical pI: Translated: 9.33; Mature: 9.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKLLLLAGTLLCGVQVHAQSCEGGLYLNPQVIRGEGSSQTESALKELIEFVRPAGLSVS CCHHHHHHHHHHHHHEEEEECCCCCEEECCEEEECCCCCHHHHHHHHHHHHHCCCCCCCC PVLNIRETQDVLTAVKRPAPPCWVYGNPVVGLASGYRPVAINMEPIQSAVLILADIGSVK CEECCHHHHHHHHHHHCCCCCEEEECCCEEECCCCCEEEEEEHHHHHHHHHHEECCCCCC DGKPVELKNLPIDEQAKILARLKATSCFGMKSGVTTTLVKAENLCGTVVEVMPQQGLGQS CCCCEEEECCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEEHHHHHHHHHHHHCCCCCCCC YLPTKAAFHWQADRWVGLITRLQTAQASTMKNHYGTDERIHLARLVVVPAANPSWGYGIY CCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEECCCCCCCEEEE VHPDVPGDALKKVANQFTSLKTSNPSLLRALDLGSKYEFATPSEKSVQAMKLSLGTAP ECCCCCHHHHHHHHHHHHHCCCCCCHHHHEECCCCCCCCCCCCHHHHHHHHEECCCCC >Mature Secondary Structure MKKLLLLAGTLLCGVQVHAQSCEGGLYLNPQVIRGEGSSQTESALKELIEFVRPAGLSVS CCHHHHHHHHHHHHHEEEEECCCCCEEECCEEEECCCCCHHHHHHHHHHHHHCCCCCCCC PVLNIRETQDVLTAVKRPAPPCWVYGNPVVGLASGYRPVAINMEPIQSAVLILADIGSVK CEECCHHHHHHHHHHHCCCCCEEEECCCEEECCCCCEEEEEEHHHHHHHHHHEECCCCCC DGKPVELKNLPIDEQAKILARLKATSCFGMKSGVTTTLVKAENLCGTVVEVMPQQGLGQS CCCCEEEECCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEEHHHHHHHHHHHHCCCCCCCC YLPTKAAFHWQADRWVGLITRLQTAQASTMKNHYGTDERIHLARLVVVPAANPSWGYGIY CCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEECCCCCCCEEEE VHPDVPGDALKKVANQFTSLKTSNPSLLRALDLGSKYEFATPSEKSVQAMKLSLGTAP ECCCCCHHHHHHHHHHHHHCCCCCCHHHHEECCCCCCCCCCCCHHHHHHHHEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA