Definition | Polaromonas sp. JS666 chromosome, complete genome. |
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Accession | NC_007948 |
Length | 5,200,264 |
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The map label for this gene is 91788591
Identifier: 91788591
GI number: 91788591
Start: 2874944
End: 2875543
Strand: Direct
Name: 91788591
Synonym: Bpro_2729
Alternate gene names: NA
Gene position: 2874944-2875543 (Clockwise)
Preceding gene: 91788590
Following gene: 91788592
Centisome position: 55.28
GC content: 64.67
Gene sequence:
>600_bases ATGATGGATACCGGCAAGCAGGTGATTCACCCCGGGTGGCTGCGGGCCATGCACTGGCTCAATGCCCTTGCGGTCGTGGT CCTGATGATGAGCGGCTGGAGAATCTACAACGCCACTGCCTTCCTGGGCTTCACGATTCCGAAAGACATCACGCTGGGCG GCTGGCTGGGCGGTGCCCTCCAGTGGCACTTTGCCGCCATGTGGGTGCTGGGCATCAACGGCCTGCTGTACCTGGTCCTC AACCTTGCCACCGGCCGCCTGCTGCGCAAGTTCTTTCCGCTCTCTCCCCGGGCCCTGCTGGCCGATCTGCAGGCCGCGCT CAAGGGCCGGCTCGCCCATGCCGACCCGCGGCATTACAACATGGTGCAGCGCCTGGCCTACCTGTTTGTGATGGTCGACA GCGTCCTGCTGGTGATCTCTGGCCTGGTGCTCTGGAAGTCGGTGCAATTCCCCCTGCTGCGCGAGCTGATGGGTGGCTAC GAAGGCGCCCGGCTGGTGCACTTTTTCGCCATGGCCGCACTGGCCGCGTTTGTGGCGGTTCACCTGGTGATGGTGGCGCT GGTGCCGCGCACGCTGCTGTACATGGTTCGCGGCCGCTAA
Upstream 100 bases:
>100_bases TGTAAGAAACCGGCGTTCCCCTCGACCAACCGTCAACACGCAGCAAACCTGCCGTGGAGACCCTGGGAGTCCCAGGCTTT GTTGGCGAATGAGGAGCACC
Downstream 100 bases:
>100_bases GGAGCCTGACGTGATGATCAAAACCCCTCCCCGCCTGGCCATTGACGGCGACGCCGTGCTCAAGGAAGCCGTGAGCCGAA TCAGCCACGCCAGTCGCATC
Product: hypothetical protein
Products: NA
Alternate protein names: Cytochrome B; Transmembrane Hydrogenase Cytochrome B-Type Subunit; HupC/HyaC/HydC Family Protein; Thiosulfate Reductase Cytochrome Subunit B; Thiosulfate Reductase Cytochrome B Subunit-Like Protein; Transmembrane Hydrogenase Cytochrome B- Type Subunit; Cytochrome; Conserved Protein; B-Type Cytochomre; Transmembrane Hydrogenase Cytochrome
Number of amino acids: Translated: 199; Mature: 199
Protein sequence:
>199_residues MMDTGKQVIHPGWLRAMHWLNALAVVVLMMSGWRIYNATAFLGFTIPKDITLGGWLGGALQWHFAAMWVLGINGLLYLVL NLATGRLLRKFFPLSPRALLADLQAALKGRLAHADPRHYNMVQRLAYLFVMVDSVLLVISGLVLWKSVQFPLLRELMGGY EGARLVHFFAMAALAAFVAVHLVMVALVPRTLLYMVRGR
Sequences:
>Translated_199_residues MMDTGKQVIHPGWLRAMHWLNALAVVVLMMSGWRIYNATAFLGFTIPKDITLGGWLGGALQWHFAAMWVLGINGLLYLVL NLATGRLLRKFFPLSPRALLADLQAALKGRLAHADPRHYNMVQRLAYLFVMVDSVLLVISGLVLWKSVQFPLLRELMGGY EGARLVHFFAMAALAAFVAVHLVMVALVPRTLLYMVRGR >Mature_199_residues MMDTGKQVIHPGWLRAMHWLNALAVVVLMMSGWRIYNATAFLGFTIPKDITLGGWLGGALQWHFAAMWVLGINGLLYLVL NLATGRLLRKFFPLSPRALLADLQAALKGRLAHADPRHYNMVQRLAYLFVMVDSVLLVISGLVLWKSVQFPLLRELMGGY EGARLVHFFAMAALAAFVAVHLVMVALVPRTLLYMVRGR
Specific function: Unknown
COG id: COG4117
COG function: function code C; Thiosulfate reductase cytochrome B subunit (membrane anchoring protein)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22269; Mature: 22269
Theoretical pI: Translated: 11.25; Mature: 11.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 6.0 %Met (Translated Protein) 6.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 6.0 %Met (Mature Protein) 6.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMDTGKQVIHPGWLRAMHWLNALAVVVLMMSGWRIYNATAFLGFTIPKDITLGGWLGGAL CCCCCCHHHCHHHHHHHHHHHHHHHHHHHHHCCHHEEHHHHEEEECCCCCEECHHHHHHH QWHFAAMWVLGINGLLYLVLNLATGRLLRKFFPLSPRALLADLQAALKGRLAHADPRHYN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCHHHH MVQRLAYLFVMVDSVLLVISGLVLWKSVQFPLLRELMGGYEGARLVHFFAMAALAAFVAV HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH HLVMVALVPRTLLYMVRGR HHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MMDTGKQVIHPGWLRAMHWLNALAVVVLMMSGWRIYNATAFLGFTIPKDITLGGWLGGAL CCCCCCHHHCHHHHHHHHHHHHHHHHHHHHHCCHHEEHHHHEEEECCCCCEECHHHHHHH QWHFAAMWVLGINGLLYLVLNLATGRLLRKFFPLSPRALLADLQAALKGRLAHADPRHYN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCHHHH MVQRLAYLFVMVDSVLLVISGLVLWKSVQFPLLRELMGGYEGARLVHFFAMAALAAFVAV HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH HLVMVALVPRTLLYMVRGR HHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA