Definition | Polaromonas sp. JS666 chromosome, complete genome. |
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Accession | NC_007948 |
Length | 5,200,264 |
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The map label for this gene is 91788173
Identifier: 91788173
GI number: 91788173
Start: 2399653
End: 2400198
Strand: Direct
Name: 91788173
Synonym: Bpro_2304
Alternate gene names: NA
Gene position: 2399653-2400198 (Clockwise)
Preceding gene: 91788169
Following gene: 91788175
Centisome position: 46.14
GC content: 58.42
Gene sequence:
>546_bases ATGACCTATACCGCTGAGCAACTCATCGCGACCACCCAGTCCAACGTCGACGCCCTGGAAGGTCTGGCGACCCAGGCTTT TGCCGGATTCGAAAAACTGGTTGAATTGAATCTGTCCGCCTCCAAGGCGGCCTTGGCTGAGTCTTTCAGCAATGCACGTG CTTTGGCCGGCGCCAAGGATCCCCAGCAGCTGCTGGCCCTGCAAGCTGGCCTGTTCCAGCCCCTGGCTGAGAAGTCTGTG TCCTATGGCAATCAGGTGTACAGCGTTGCCGCTGAAACCGGAGCCGTCTTTACCAAGACTTTTGAAGCCAAAGTGGACGA GGCCAAAAAAGCCTTTGCCGTCGCGGTGGACAACATGACCAAGAACGCTCCGGCCGGAACCGAAGCTGCCGTGGCCGCTT TCAAAAGCGCTGTCAGCGCCAGCCAAAACGCCATCGAGACAGCCCAAGGCACGGCCAAGAAGGCCGTCGAATTGGCTGAG TCAAACTTCACCGCTGTGACCAAGCAGGCGGTCAGTGCGGCTACCACCAGCTCCAAAAAGCGCTAA
Upstream 100 bases:
>100_bases TTCTCCATAATAGAGTCTATGCTGCACTGCAACATAAATAACCCAAACCGGGTTCAGGCAGAGCAGGCATCCCGAATTTC CATTAACCCAGGAGCTATCA
Downstream 100 bases:
>100_bases GTTTGAGTTGGGCGTTGATCGCTTCGCGGCAGGGGCGTTGCCCTGTCCAGGCCGTGGGTGTGTGAGCCTCGAAACATCAT CAAAAACCCCGCAATCGCGG
Product: phasin
Products: NA
Alternate protein names: Phasin; Granule-Associated Protein; Phasin Family Protein Protein; Phasin Family Domain-Containing Protein; Phasin-Like Protein
Number of amino acids: Translated: 181; Mature: 180
Protein sequence:
>181_residues MTYTAEQLIATTQSNVDALEGLATQAFAGFEKLVELNLSASKAALAESFSNARALAGAKDPQQLLALQAGLFQPLAEKSV SYGNQVYSVAAETGAVFTKTFEAKVDEAKKAFAVAVDNMTKNAPAGTEAAVAAFKSAVSASQNAIETAQGTAKKAVELAE SNFTAVTKQAVSAATTSSKKR
Sequences:
>Translated_181_residues MTYTAEQLIATTQSNVDALEGLATQAFAGFEKLVELNLSASKAALAESFSNARALAGAKDPQQLLALQAGLFQPLAEKSV SYGNQVYSVAAETGAVFTKTFEAKVDEAKKAFAVAVDNMTKNAPAGTEAAVAAFKSAVSASQNAIETAQGTAKKAVELAE SNFTAVTKQAVSAATTSSKKR >Mature_180_residues TYTAEQLIATTQSNVDALEGLATQAFAGFEKLVELNLSASKAALAESFSNARALAGAKDPQQLLALQAGLFQPLAEKSVS YGNQVYSVAAETGAVFTKTFEAKVDEAKKAFAVAVDNMTKNAPAGTEAAVAAFKSAVSASQNAIETAQGTAKKAVELAES NFTAVTKQAVSAATTSSKKR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18646; Mature: 18515
Theoretical pI: Translated: 6.95; Mature: 6.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 0.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTYTAEQLIATTQSNVDALEGLATQAFAGFEKLVELNLSASKAALAESFSNARALAGAKD CCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCC PQQLLALQAGLFQPLAEKSVSYGNQVYSVAAETGAVFTKTFEAKVDEAKKAFAVAVDNMT HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCC KNAPAGTEAAVAAFKSAVSASQNAIETAQGTAKKAVELAESNFTAVTKQAVSAATTSSKK CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCC R C >Mature Secondary Structure TYTAEQLIATTQSNVDALEGLATQAFAGFEKLVELNLSASKAALAESFSNARALAGAKD CCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCC PQQLLALQAGLFQPLAEKSVSYGNQVYSVAAETGAVFTKTFEAKVDEAKKAFAVAVDNMT HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCC KNAPAGTEAAVAAFKSAVSASQNAIETAQGTAKKAVELAESNFTAVTKQAVSAATTSSKK CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCC R C
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA