Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

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The map label for this gene is 91788175

Identifier: 91788175

GI number: 91788175

Start: 2401443

End: 2401853

Strand: Direct

Name: 91788175

Synonym: Bpro_2306

Alternate gene names: NA

Gene position: 2401443-2401853 (Clockwise)

Preceding gene: 91788173

Following gene: 91788178

Centisome position: 46.18

GC content: 56.93

Gene sequence:

>411_bases
ATGCATAACCACGCCTGGTACTCCCGGTTTGCGAAGGCTGCGGCGCATTTCTGTGGCCGGCCCAGAGTGTTTGTCCTTGC
CGTGGCCATCATCGCCGTCTGGGTAGTGACCGGGCCCCTGTTCGGCTTCAGTGACACCTGGCAATTGGTCATCAACACCG
GCACCACGATCATCACCTTCCTGATGGTCTTCCTGATTCAGAACACCCAAAACCGGGATACGGAGGCCATCCAGGTGAAA
CTCGATGAACTCATTCGTGCAACCCAGGGGGCGCATAACGCTCTTCTCGATCTGGAAGAACTGGAAGAGGAGGATCTCGA
CGCATTCAGAACCCGGTATGAAGCACTTGCAACGGCAGCGAGGGTGGAGTTAAAGCGTGGATTACAGGACACCGGAACGC
CAGAGCCCTGA

Upstream 100 bases:

>100_bases
CACGCGGATATCAGGTATACCTCAACCAATCCTGTTGGCTTGGTGGCCCCTGGGCTGCAAGCCCTGCCGGATTCGTCGGA
CGCCAAAAGAGAGGTTCGGT

Downstream 100 bases:

>100_bases
AGCGTCGCGGGTGAAGCATTCTGGAGCGCTCGGAGCGGACAGGCGCTGGGCAACCACAGATTGGCGTGGGCCACTCTGCA
GCCAGGTGGTGTGGTTTCAG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 136; Mature: 136

Protein sequence:

>136_residues
MHNHAWYSRFAKAAAHFCGRPRVFVLAVAIIAVWVVTGPLFGFSDTWQLVINTGTTIITFLMVFLIQNTQNRDTEAIQVK
LDELIRATQGAHNALLDLEELEEEDLDAFRTRYEALATAARVELKRGLQDTGTPEP

Sequences:

>Translated_136_residues
MHNHAWYSRFAKAAAHFCGRPRVFVLAVAIIAVWVVTGPLFGFSDTWQLVINTGTTIITFLMVFLIQNTQNRDTEAIQVK
LDELIRATQGAHNALLDLEELEEEDLDAFRTRYEALATAARVELKRGLQDTGTPEP
>Mature_136_residues
MHNHAWYSRFAKAAAHFCGRPRVFVLAVAIIAVWVVTGPLFGFSDTWQLVINTGTTIITFLMVFLIQNTQNRDTEAIQVK
LDELIRATQGAHNALLDLEELEEEDLDAFRTRYEALATAARVELKRGLQDTGTPEP

Specific function: Unknown

COG id: COG5478

COG function: function code S; Predicted small integral membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15300; Mature: 15300

Theoretical pI: Translated: 5.17; Mature: 5.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHNHAWYSRFAKAAAHFCGRPRVFVLAVAIIAVWVVTGPLFGFSDTWQLVINTGTTIITF
CCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHEEECCHHHHHH
LMVFLIQNTQNRDTEAIQVKLDELIRATQGAHNALLDLEELEEEDLDAFRTRYEALATAA
HHHHHHHCCCCCCHHHHHHHHHHHHHHHCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHH
RVELKRGLQDTGTPEP
HHHHHHCCCCCCCCCC
>Mature Secondary Structure
MHNHAWYSRFAKAAAHFCGRPRVFVLAVAIIAVWVVTGPLFGFSDTWQLVINTGTTIITF
CCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHEEECCHHHHHH
LMVFLIQNTQNRDTEAIQVKLDELIRATQGAHNALLDLEELEEEDLDAFRTRYEALATAA
HHHHHHHCCCCCCHHHHHHHHHHHHHHHCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHH
RVELKRGLQDTGTPEP
HHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA