Definition | Polaromonas sp. JS666 chromosome, complete genome. |
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Accession | NC_007948 |
Length | 5,200,264 |
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The map label for this gene is 91787744
Identifier: 91787744
GI number: 91787744
Start: 1924985
End: 1925740
Strand: Reverse
Name: 91787744
Synonym: Bpro_1865
Alternate gene names: NA
Gene position: 1925740-1924985 (Counterclockwise)
Preceding gene: 91787745
Following gene: 91787743
Centisome position: 37.03
GC content: 64.15
Gene sequence:
>756_bases ATGGATTCGCAGACACTCCTGGTCGTGATGGGTGCCGCACTTGCCGGCTTTGTGCAGGGCCTTTCAGGCTTTGGCTTCGG CCTCGTCGCCATGTCTGTCTGGGCCTGGACGATTGATCCGCGGCTTGCCGCCGCCATGGCGGTTTTTGGTGCCCTGACCG GGCAGCTGGTGGCTGCCGCTACGGTGCGCCGCGGTTTTGATCTGCGGCGGCTGGCCCCTTTTGTGGCCGGTGGCCTGCTC GGCATTCCCGCCGGACTGCTGATGCTGCCCTTGATGGACGTGCAGATGTTCAAGGCCTTTCTGGGCATGCTGCTTATGCT CTGGTGCCCCGCCATGCTGATGGCAGGCCAATTACCCCGCATCACCGCGGGCGGTCGTCTCGGCGACGGGCTGGCGGGCG GCGTAGGCGGCATGATGAGTGCGATGGGTGGTTTTTCGGGTGTCATTCCCACGCTCTGGTGCACGCTGCGCGGCTATGAC AAGCACGCCCAGCGCGCCATCATTCAGAACTTCAATCTGGCCATGCTGATGGTCACCATGGCCACTTACATCGCCACCGG CATCGTGACCCGCGAAACCGTACCCATGCTGGCCATCGTGGCGCCGGCGATGCTGCTGCCTTCACTCATCGGCGCGCGGG TCTACATTGGCATCAGCGAAGTAATGTTCCGCAAGATCATCTTGAGCCTGCTGACCGCCTCGGGTGCAGCCCTGCTGGGC TCCTCGCTGCCACAGCTGCTGGGCCGGGCGAGCTGA
Upstream 100 bases:
>100_bases TTTTGCAGTTGCGTGCCCGTGAGCGACTACGCCTGAAACAAACCAGGGGTTTTTCAAGGTTTACTGCCGTTCACTGCCAT TCACTGCCTCTTCGCCCTGC
Downstream 100 bases:
>100_bases TGCGGTGCCTGTAACTTCACCGTTACAGGGCATTGCGCCGACCCGGAGATAATGCGGCGGACTGTTTCCCGCGCGTTTTC CGTTTTGCCTGCTTCCGTCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 251; Mature: 251
Protein sequence:
>251_residues MDSQTLLVVMGAALAGFVQGLSGFGFGLVAMSVWAWTIDPRLAAAMAVFGALTGQLVAAATVRRGFDLRRLAPFVAGGLL GIPAGLLMLPLMDVQMFKAFLGMLLMLWCPAMLMAGQLPRITAGGRLGDGLAGGVGGMMSAMGGFSGVIPTLWCTLRGYD KHAQRAIIQNFNLAMLMVTMATYIATGIVTRETVPMLAIVAPAMLLPSLIGARVYIGISEVMFRKIILSLLTASGAALLG SSLPQLLGRAS
Sequences:
>Translated_251_residues MDSQTLLVVMGAALAGFVQGLSGFGFGLVAMSVWAWTIDPRLAAAMAVFGALTGQLVAAATVRRGFDLRRLAPFVAGGLL GIPAGLLMLPLMDVQMFKAFLGMLLMLWCPAMLMAGQLPRITAGGRLGDGLAGGVGGMMSAMGGFSGVIPTLWCTLRGYD KHAQRAIIQNFNLAMLMVTMATYIATGIVTRETVPMLAIVAPAMLLPSLIGARVYIGISEVMFRKIILSLLTASGAALLG SSLPQLLGRAS >Mature_251_residues MDSQTLLVVMGAALAGFVQGLSGFGFGLVAMSVWAWTIDPRLAAAMAVFGALTGQLVAAATVRRGFDLRRLAPFVAGGLL GIPAGLLMLPLMDVQMFKAFLGMLLMLWCPAMLMAGQLPRITAGGRLGDGLAGGVGGMMSAMGGFSGVIPTLWCTLRGYD KHAQRAIIQNFNLAMLMVTMATYIATGIVTRETVPMLAIVAPAMLLPSLIGARVYIGISEVMFRKIILSLLTASGAALLG SSLPQLLGRAS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26149; Mature: 26149
Theoretical pI: Translated: 11.03; Mature: 11.03
Prosite motif: PS00962 RIBOSOMAL_S2_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 8.0 %Met (Translated Protein) 8.8 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 8.0 %Met (Mature Protein) 8.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDSQTLLVVMGAALAGFVQGLSGFGFGLVAMSVWAWTIDPRLAAAMAVFGALTGQLVAAA CCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH TVRRGFDLRRLAPFVAGGLLGIPAGLLMLPLMDVQMFKAFLGMLLMLWCPAMLMAGQLPR HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC ITAGGRLGDGLAGGVGGMMSAMGGFSGVIPTLWCTLRGYDKHAQRAIIQNFNLAMLMVTM CCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHH ATYIATGIVTRETVPMLAIVAPAMLLPSLIGARVYIGISEVMFRKIILSLLTASGAALLG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH SSLPQLLGRAS HHHHHHHCCCC >Mature Secondary Structure MDSQTLLVVMGAALAGFVQGLSGFGFGLVAMSVWAWTIDPRLAAAMAVFGALTGQLVAAA CCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH TVRRGFDLRRLAPFVAGGLLGIPAGLLMLPLMDVQMFKAFLGMLLMLWCPAMLMAGQLPR HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC ITAGGRLGDGLAGGVGGMMSAMGGFSGVIPTLWCTLRGYDKHAQRAIIQNFNLAMLMVTM CCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHH ATYIATGIVTRETVPMLAIVAPAMLLPSLIGARVYIGISEVMFRKIILSLLTASGAALLG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH SSLPQLLGRAS HHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA