Definition | Polaromonas sp. JS666 chromosome, complete genome. |
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Accession | NC_007948 |
Length | 5,200,264 |
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The map label for this gene is yedA [C]
Identifier: 91787722
GI number: 91787722
Start: 1904806
End: 1905690
Strand: Reverse
Name: yedA [C]
Synonym: Bpro_1843
Alternate gene names: 91787722
Gene position: 1905690-1904806 (Counterclockwise)
Preceding gene: 91787723
Following gene: 91787720
Centisome position: 36.65
GC content: 68.25
Gene sequence:
>885_bases ATGCAGACCCGACATTTCATCCAGCTCATCGCCCTGTCCGCCTTCTGGGGCGCATCATTTCCCCTGTTGCGCATTGCCAG TCCGGCGCTCGGTCCCTGGGTGGTCGCCAGCCTGCGTTGCACCCTGGCCGCCATGGTGCTGGCCGTGCTCATGCACACAC TGCGTGACCGCTGGCCTCCCCGCGCCGCCTGGCCGCGCCTGGCGCTGCTGAGCCTGCTCACCGTGGTCATTCCCTTCGTG CTGTTCAACTGGGCCGCCCTGGTCATTCCCGCAGGCTATTCGGCAGTGCTTAATGCCACGGCCCCGCTGTTCGGCGTGCT GGGCGCCGCCGCTGCCAGCGAGGAAAGGCTCACCTCACGGCGCCTGCTGGGTTGTGCCGTGGGCTTTGCCGGCGTGGCGC TGCTGGTCCAGTTGGGACCGGTGGCCGTCACACCGCAAGTCGTGCTGGCCGCGCTGGCGTGCACAGCGGCCGCAGCCAGC TACGGCGTGGGCACCGTCCTGATGAAACGCGCCACCATGGCCTACGCACCGTTGCCGGCGTCCGCCGCCGTGTTTGTCGC GGCCACGCTGATTTTGCTGCTCCCGGCAGGCATGGCCGCGCCTTCAGCGCACCCTACCCCCGGCGCGCTGCTGGCGGTGG CCATGCTGGGCATCGTCACCTCGGGCTTCTTGTATTGGATCAGCATGCGGCTGATGCGCGAAATTTCGGCCAGCGCGGCC ACGTCAGCCGCTTTCATGATTCCGCTGTTCGGGGTCACCTGGGGCGCGCTTTTCCTGGGGGAGGCGGTCACGGCCAGCAT GCTGCCCGGCTGTGTGCTGGTGCTGGCCGCCACGGCGCTGATCACCGGCTTCAACCCCTTTCGAAGCTCCTCGTCCGAAC CCTGA
Upstream 100 bases:
>100_bases CACTCGGGCCCGCGACAGCTCTGCCGGCCAAAGGCCCTGACCCGCTCCAAGGGTGAGTCAGCAGCATTCAGCCGAATCAC GCACAATCTCGGCACCCGAC
Downstream 100 bases:
>100_bases GCCAGAAGGCAACCGCGTTGAGCGGGGACTCAGCCGCGTGCGCGCATGATGTCCGGCGTGCTGACCGTCACATCGGCATT TTGCGCACGCTGGCGCAGCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 294; Mature: 294
Protein sequence:
>294_residues MQTRHFIQLIALSAFWGASFPLLRIASPALGPWVVASLRCTLAAMVLAVLMHTLRDRWPPRAAWPRLALLSLLTVVIPFV LFNWAALVIPAGYSAVLNATAPLFGVLGAAAASEERLTSRRLLGCAVGFAGVALLVQLGPVAVTPQVVLAALACTAAAAS YGVGTVLMKRATMAYAPLPASAAVFVAATLILLLPAGMAAPSAHPTPGALLAVAMLGIVTSGFLYWISMRLMREISASAA TSAAFMIPLFGVTWGALFLGEAVTASMLPGCVLVLAATALITGFNPFRSSSSEP
Sequences:
>Translated_294_residues MQTRHFIQLIALSAFWGASFPLLRIASPALGPWVVASLRCTLAAMVLAVLMHTLRDRWPPRAAWPRLALLSLLTVVIPFV LFNWAALVIPAGYSAVLNATAPLFGVLGAAAASEERLTSRRLLGCAVGFAGVALLVQLGPVAVTPQVVLAALACTAAAAS YGVGTVLMKRATMAYAPLPASAAVFVAATLILLLPAGMAAPSAHPTPGALLAVAMLGIVTSGFLYWISMRLMREISASAA TSAAFMIPLFGVTWGALFLGEAVTASMLPGCVLVLAATALITGFNPFRSSSSEP >Mature_294_residues MQTRHFIQLIALSAFWGASFPLLRIASPALGPWVVASLRCTLAAMVLAVLMHTLRDRWPPRAAWPRLALLSLLTVVIPFV LFNWAALVIPAGYSAVLNATAPLFGVLGAAAASEERLTSRRLLGCAVGFAGVALLVQLGPVAVTPQVVLAALACTAAAAS YGVGTVLMKRATMAYAPLPASAAVFVAATLILLLPAGMAAPSAHPTPGALLAVAMLGIVTSGFLYWISMRLMREISASAA TSAAFMIPLFGVTWGALFLGEAVTASMLPGCVLVLAATALITGFNPFRSSSSEP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Integral Membrane Protein [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30382; Mature: 30382
Theoretical pI: Translated: 10.77; Mature: 10.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQTRHFIQLIALSAFWGASFPLLRIASPALGPWVVASLRCTLAAMVLAVLMHTLRDRWPP CCHHHHHHHHHHHHHHCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC RAAWPRLALLSLLTVVIPFVLFNWAALVIPAGYSAVLNATAPLFGVLGAAAASEERLTSR CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH RLLGCAVGFAGVALLVQLGPVAVTPQVVLAALACTAAAASYGVGTVLMKRATMAYAPLPA HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC SAAVFVAATLILLLPAGMAAPSAHPTPGALLAVAMLGIVTSGFLYWISMRLMREISASAA HHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TSAAFMIPLFGVTWGALFLGEAVTASMLPGCVLVLAATALITGFNPFRSSSSEP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCC >Mature Secondary Structure MQTRHFIQLIALSAFWGASFPLLRIASPALGPWVVASLRCTLAAMVLAVLMHTLRDRWPP CCHHHHHHHHHHHHHHCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC RAAWPRLALLSLLTVVIPFVLFNWAALVIPAGYSAVLNATAPLFGVLGAAAASEERLTSR CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH RLLGCAVGFAGVALLVQLGPVAVTPQVVLAALACTAAAASYGVGTVLMKRATMAYAPLPA HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC SAAVFVAATLILLLPAGMAAPSAHPTPGALLAVAMLGIVTSGFLYWISMRLMREISASAA HHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TSAAFMIPLFGVTWGALFLGEAVTASMLPGCVLVLAATALITGFNPFRSSSSEP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA