Definition | Polaromonas sp. JS666 chromosome, complete genome. |
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Accession | NC_007948 |
Length | 5,200,264 |
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The map label for this gene is 91787723
Identifier: 91787723
GI number: 91787723
Start: 1905989
End: 1906771
Strand: Reverse
Name: 91787723
Synonym: Bpro_1844
Alternate gene names: NA
Gene position: 1906771-1905989 (Counterclockwise)
Preceding gene: 91787724
Following gene: 91787722
Centisome position: 36.67
GC content: 62.2
Gene sequence:
>783_bases ATGGGCATGGCCAGTGCGAGCGTTGAAAAGGCATTGAAGCACGACCGGCTGCTGGTTATTTCCGGTTTGTTGCTGGTGGT GGCCTTGGCTTGGGCCTACCTGCTGACGGGCGCCGGGACCCTGCAGGAAATGGGTGGCATGCTGATGCCGATGAGTTCAG GCCCGTGGACGCCAACGCACGCAATGATCATGCTGGCGATGTGGGTCGTGATGATGGCCGCGATGATGCTGCCGAGCGCC ACGCCCATGATCCTGCTTTACACCACCATCGCCCACGGCCGCCGCGCAAAAGGCGAACAGGCATCGGGATCCATCCTTTT TGTGGGCGGATACGTCACCATCTGGACGGCGTTCAGCCTGGTGGCGGTGGCGCTTCAGTTCGGGCTGGACAAGGCCGCGC TGCTCTCACCCATGATGGAAACGACCAGCATCGGTCTGGCCGGCACGGTCCTGATTGCGGCCGGCATCTATCAGTGGACG CCGCTCAAGCAAGCCTGCCTTCGGCGCTGCCGCTCTCCCCTGGACTTCGTATTGATGCACTGGCGCAATGGACCAACGGG CGCGTTTTTGATGGGCCTGCACCATGGCATGTTCTGCGTTGGCTGCTGCTGGATGCTGATGCTCCTGCTCTTTGTCGGCG GCGTGATGAATCTGGTCTGGATCGCGGGAATTGCCCTCTTTGTGCTGGTGGAAAAACTCGTACCCGCCGGCCACTGGATA GGCCGGGGCGCGGGCCTTCTATTGATCGGATGGGGCGTCGCCACCCTGCTGACGGCCTCCTGA
Upstream 100 bases:
>100_bases CACCACAGGGTCGCACAGTACGCTTGCCCATGTTGTCCAGACTCCGCAGGGCGTTGTCGCCTGACCGGGCGGCGGCCTTC CCGGCGCGTAGCCACGACAA
Downstream 100 bases:
>100_bases ACAGACGGTGGCGACGTTTGATAGAACAGGGTGGCATTGCATCGATCGACCGCTATTACTTTTATAGCAATCTAGCCAGA ATTTACCAGGCTGCAGCCTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 260; Mature: 259
Protein sequence:
>260_residues MGMASASVEKALKHDRLLVISGLLLVVALAWAYLLTGAGTLQEMGGMLMPMSSGPWTPTHAMIMLAMWVVMMAAMMLPSA TPMILLYTTIAHGRRAKGEQASGSILFVGGYVTIWTAFSLVAVALQFGLDKAALLSPMMETTSIGLAGTVLIAAGIYQWT PLKQACLRRCRSPLDFVLMHWRNGPTGAFLMGLHHGMFCVGCCWMLMLLLFVGGVMNLVWIAGIALFVLVEKLVPAGHWI GRGAGLLLIGWGVATLLTAS
Sequences:
>Translated_260_residues MGMASASVEKALKHDRLLVISGLLLVVALAWAYLLTGAGTLQEMGGMLMPMSSGPWTPTHAMIMLAMWVVMMAAMMLPSA TPMILLYTTIAHGRRAKGEQASGSILFVGGYVTIWTAFSLVAVALQFGLDKAALLSPMMETTSIGLAGTVLIAAGIYQWT PLKQACLRRCRSPLDFVLMHWRNGPTGAFLMGLHHGMFCVGCCWMLMLLLFVGGVMNLVWIAGIALFVLVEKLVPAGHWI GRGAGLLLIGWGVATLLTAS >Mature_259_residues GMASASVEKALKHDRLLVISGLLLVVALAWAYLLTGAGTLQEMGGMLMPMSSGPWTPTHAMIMLAMWVVMMAAMMLPSAT PMILLYTTIAHGRRAKGEQASGSILFVGGYVTIWTAFSLVAVALQFGLDKAALLSPMMETTSIGLAGTVLIAAGIYQWTP LKQACLRRCRSPLDFVLMHWRNGPTGAFLMGLHHGMFCVGCCWMLMLLLFVGGVMNLVWIAGIALFVLVEKLVPAGHWIG RGAGLLLIGWGVATLLTAS
Specific function: Unknown
COG id: COG5486
COG function: function code S; Predicted metal-binding integral membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27793; Mature: 27662
Theoretical pI: Translated: 9.34; Mature: 9.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 8.5 %Met (Translated Protein) 10.4 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 8.1 %Met (Mature Protein) 10.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGMASASVEKALKHDRLLVISGLLLVVALAWAYLLTGAGTLQEMGGMLMPMSSGPWTPTH CCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCEEEECCCCCCCHHH AMIMLAMWVVMMAAMMLPSATPMILLYTTIAHGRRAKGEQASGSILFVGGYVTIWTAFSL HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCCCCEEEECHHHHHHHHHHH VAVALQFGLDKAALLSPMMETTSIGLAGTVLIAAGIYQWTPLKQACLRRCRSPLDFVLMH HHHHHHHCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHH WRNGPTGAFLMGLHHGMFCVGCCWMLMLLLFVGGVMNLVWIAGIALFVLVEKLVPAGHWI CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH GRGAGLLLIGWGVATLLTAS CCCCCEEEEHHHHHHHHCCC >Mature Secondary Structure GMASASVEKALKHDRLLVISGLLLVVALAWAYLLTGAGTLQEMGGMLMPMSSGPWTPTH CCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCEEEECCCCCCCHHH AMIMLAMWVVMMAAMMLPSATPMILLYTTIAHGRRAKGEQASGSILFVGGYVTIWTAFSL HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCCCCEEEECHHHHHHHHHHH VAVALQFGLDKAALLSPMMETTSIGLAGTVLIAAGIYQWTPLKQACLRRCRSPLDFVLMH HHHHHHHCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHH WRNGPTGAFLMGLHHGMFCVGCCWMLMLLLFVGGVMNLVWIAGIALFVLVEKLVPAGHWI CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH GRGAGLLLIGWGVATLLTAS CCCCCEEEEHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA