Definition | Polaromonas sp. JS666 chromosome, complete genome. |
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Accession | NC_007948 |
Length | 5,200,264 |
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The map label for this gene is 91787720
Identifier: 91787720
GI number: 91787720
Start: 1903139
End: 1903564
Strand: Reverse
Name: 91787720
Synonym: Bpro_1841
Alternate gene names: NA
Gene position: 1903564-1903139 (Counterclockwise)
Preceding gene: 91787722
Following gene: 91787718
Centisome position: 36.61
GC content: 57.51
Gene sequence:
>426_bases ATGCTTGAGCGAACCAACACCCTGTTCTCACATGTCAAACCCGGCGACACGCCATTCAAATCCGACGGATTGCGCGATTT CTTCCTCTACCGCGACCTGGGCATTGCCGAGGCGACCCACGGCAAGGTCATCGCGCACCTGGTGAAGGCCAATATGGCAC CAGAAAAAGGCACGGGCTGGCACCGGCATGAAGCGGACTTCCAGATCGTCATCATGCTCAAGGGCTGGGCCCGATTCATG TACGAAGACCGGGAAACACTGGTTTCCGCAGGCGATTGTGTGCACCAGCGCCCCGGCATACGACACTACCTGTTTGACTA TTCACCCGACATGGAATACCTGGAAATTGTCTCGCCGGCGGACTTCAAGAGCATTGATGTGGAGCCTGTGTGCGAGATTC CCGAGCCTACGCCCTGGGGGAGATAG
Upstream 100 bases:
>100_bases AACCGTCGGGCATCGCCGGGCCGTGACGGGGAAACTGCGACTGGAACGCTTCATGCATGAAGGCACGGGCGCAAATGGCT GCGCACTACCGGAGGGCACC
Downstream 100 bases:
>100_bases CCCCCACGGTCGCTCTACTAGCGTGTAGCTCCCTGCCCCCCCGAGGGGGCCGCTGCGCCTGCGGTCTGGCAAAGCCAGTC CCGCGGCCCCTGCTGGCTGG
Product: cupin 2 barrel-domain containing protein
Products: NA
Alternate protein names: Cupin 2 Conserved Barrel Domain Protein; Cupin 2 Barrel
Number of amino acids: Translated: 141; Mature: 141
Protein sequence:
>141_residues MLERTNTLFSHVKPGDTPFKSDGLRDFFLYRDLGIAEATHGKVIAHLVKANMAPEKGTGWHRHEADFQIVIMLKGWARFM YEDRETLVSAGDCVHQRPGIRHYLFDYSPDMEYLEIVSPADFKSIDVEPVCEIPEPTPWGR
Sequences:
>Translated_141_residues MLERTNTLFSHVKPGDTPFKSDGLRDFFLYRDLGIAEATHGKVIAHLVKANMAPEKGTGWHRHEADFQIVIMLKGWARFM YEDRETLVSAGDCVHQRPGIRHYLFDYSPDMEYLEIVSPADFKSIDVEPVCEIPEPTPWGR >Mature_141_residues MLERTNTLFSHVKPGDTPFKSDGLRDFFLYRDLGIAEATHGKVIAHLVKANMAPEKGTGWHRHEADFQIVIMLKGWARFM YEDRETLVSAGDCVHQRPGIRHYLFDYSPDMEYLEIVSPADFKSIDVEPVCEIPEPTPWGR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16207; Mature: 16207
Theoretical pI: Translated: 5.86; Mature: 5.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLERTNTLFSHVKPGDTPFKSDGLRDFFLYRDLGIAEATHGKVIAHLVKANMAPEKGTGW CCCCCCHHHHHCCCCCCCCCCCCCCEEHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCC HRHEADFQIVIMLKGWARFMYEDRETLVSAGDCVHQRPGIRHYLFDYSPDMEYLEIVSPA CCCCCCEEEEEEECHHHHHHHHHHHHHHHHCCHHHCCCCCEEEEECCCCCCCEEEECCCC DFKSIDVEPVCEIPEPTPWGR CCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MLERTNTLFSHVKPGDTPFKSDGLRDFFLYRDLGIAEATHGKVIAHLVKANMAPEKGTGW CCCCCCHHHHHCCCCCCCCCCCCCCEEHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCC HRHEADFQIVIMLKGWARFMYEDRETLVSAGDCVHQRPGIRHYLFDYSPDMEYLEIVSPA CCCCCCEEEEEEECHHHHHHHHHHHHHHHHCCHHHCCCCCEEEEECCCCCCCEEEECCCC DFKSIDVEPVCEIPEPTPWGR CCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA