Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

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The map label for this gene is yedA [C]

Identifier: 91787722

GI number: 91787722

Start: 1904806

End: 1905690

Strand: Reverse

Name: yedA [C]

Synonym: Bpro_1843

Alternate gene names: 91787722

Gene position: 1905690-1904806 (Counterclockwise)

Preceding gene: 91787723

Following gene: 91787720

Centisome position: 36.65

GC content: 68.25

Gene sequence:

>885_bases
ATGCAGACCCGACATTTCATCCAGCTCATCGCCCTGTCCGCCTTCTGGGGCGCATCATTTCCCCTGTTGCGCATTGCCAG
TCCGGCGCTCGGTCCCTGGGTGGTCGCCAGCCTGCGTTGCACCCTGGCCGCCATGGTGCTGGCCGTGCTCATGCACACAC
TGCGTGACCGCTGGCCTCCCCGCGCCGCCTGGCCGCGCCTGGCGCTGCTGAGCCTGCTCACCGTGGTCATTCCCTTCGTG
CTGTTCAACTGGGCCGCCCTGGTCATTCCCGCAGGCTATTCGGCAGTGCTTAATGCCACGGCCCCGCTGTTCGGCGTGCT
GGGCGCCGCCGCTGCCAGCGAGGAAAGGCTCACCTCACGGCGCCTGCTGGGTTGTGCCGTGGGCTTTGCCGGCGTGGCGC
TGCTGGTCCAGTTGGGACCGGTGGCCGTCACACCGCAAGTCGTGCTGGCCGCGCTGGCGTGCACAGCGGCCGCAGCCAGC
TACGGCGTGGGCACCGTCCTGATGAAACGCGCCACCATGGCCTACGCACCGTTGCCGGCGTCCGCCGCCGTGTTTGTCGC
GGCCACGCTGATTTTGCTGCTCCCGGCAGGCATGGCCGCGCCTTCAGCGCACCCTACCCCCGGCGCGCTGCTGGCGGTGG
CCATGCTGGGCATCGTCACCTCGGGCTTCTTGTATTGGATCAGCATGCGGCTGATGCGCGAAATTTCGGCCAGCGCGGCC
ACGTCAGCCGCTTTCATGATTCCGCTGTTCGGGGTCACCTGGGGCGCGCTTTTCCTGGGGGAGGCGGTCACGGCCAGCAT
GCTGCCCGGCTGTGTGCTGGTGCTGGCCGCCACGGCGCTGATCACCGGCTTCAACCCCTTTCGAAGCTCCTCGTCCGAAC
CCTGA

Upstream 100 bases:

>100_bases
CACTCGGGCCCGCGACAGCTCTGCCGGCCAAAGGCCCTGACCCGCTCCAAGGGTGAGTCAGCAGCATTCAGCCGAATCAC
GCACAATCTCGGCACCCGAC

Downstream 100 bases:

>100_bases
GCCAGAAGGCAACCGCGTTGAGCGGGGACTCAGCCGCGTGCGCGCATGATGTCCGGCGTGCTGACCGTCACATCGGCATT
TTGCGCACGCTGGCGCAGCG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 294; Mature: 294

Protein sequence:

>294_residues
MQTRHFIQLIALSAFWGASFPLLRIASPALGPWVVASLRCTLAAMVLAVLMHTLRDRWPPRAAWPRLALLSLLTVVIPFV
LFNWAALVIPAGYSAVLNATAPLFGVLGAAAASEERLTSRRLLGCAVGFAGVALLVQLGPVAVTPQVVLAALACTAAAAS
YGVGTVLMKRATMAYAPLPASAAVFVAATLILLLPAGMAAPSAHPTPGALLAVAMLGIVTSGFLYWISMRLMREISASAA
TSAAFMIPLFGVTWGALFLGEAVTASMLPGCVLVLAATALITGFNPFRSSSSEP

Sequences:

>Translated_294_residues
MQTRHFIQLIALSAFWGASFPLLRIASPALGPWVVASLRCTLAAMVLAVLMHTLRDRWPPRAAWPRLALLSLLTVVIPFV
LFNWAALVIPAGYSAVLNATAPLFGVLGAAAASEERLTSRRLLGCAVGFAGVALLVQLGPVAVTPQVVLAALACTAAAAS
YGVGTVLMKRATMAYAPLPASAAVFVAATLILLLPAGMAAPSAHPTPGALLAVAMLGIVTSGFLYWISMRLMREISASAA
TSAAFMIPLFGVTWGALFLGEAVTASMLPGCVLVLAATALITGFNPFRSSSSEP
>Mature_294_residues
MQTRHFIQLIALSAFWGASFPLLRIASPALGPWVVASLRCTLAAMVLAVLMHTLRDRWPPRAAWPRLALLSLLTVVIPFV
LFNWAALVIPAGYSAVLNATAPLFGVLGAAAASEERLTSRRLLGCAVGFAGVALLVQLGPVAVTPQVVLAALACTAAAAS
YGVGTVLMKRATMAYAPLPASAAVFVAATLILLLPAGMAAPSAHPTPGALLAVAMLGIVTSGFLYWISMRLMREISASAA
TSAAFMIPLFGVTWGALFLGEAVTASMLPGCVLVLAATALITGFNPFRSSSSEP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Integral Membrane Protein [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30382; Mature: 30382

Theoretical pI: Translated: 10.77; Mature: 10.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQTRHFIQLIALSAFWGASFPLLRIASPALGPWVVASLRCTLAAMVLAVLMHTLRDRWPP
CCHHHHHHHHHHHHHHCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
RAAWPRLALLSLLTVVIPFVLFNWAALVIPAGYSAVLNATAPLFGVLGAAAASEERLTSR
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RLLGCAVGFAGVALLVQLGPVAVTPQVVLAALACTAAAASYGVGTVLMKRATMAYAPLPA
HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
SAAVFVAATLILLLPAGMAAPSAHPTPGALLAVAMLGIVTSGFLYWISMRLMREISASAA
HHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TSAAFMIPLFGVTWGALFLGEAVTASMLPGCVLVLAATALITGFNPFRSSSSEP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCC
>Mature Secondary Structure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HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA