Definition | Polaromonas sp. JS666 chromosome, complete genome. |
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Accession | NC_007948 |
Length | 5,200,264 |
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The map label for this gene is mdeA [H]
Identifier: 91787715
GI number: 91787715
Start: 1896891
End: 1898192
Strand: Reverse
Name: mdeA [H]
Synonym: Bpro_1836
Alternate gene names: 91787715
Gene position: 1898192-1896891 (Counterclockwise)
Preceding gene: 91787717
Following gene: 91787714
Centisome position: 36.5
GC content: 64.82
Gene sequence:
>1302_bases ATGTCCGGCTACTCCGACCCCGGTTTCGACACCCTGGCGCTGCACGCAGGTGCCGCACCCGACCCCGCCACGGGCGCCCG CGCGGTGCCGATTTATCTCACCACCTCCTTTGTCTTTGAGTCGAGCGACCACGCCGCCAGCCTCTTTAACCTGGAGCGTG CGGGCCACGTGTACTCACGCATCAGCAACCCCACCAATGCGGTGCTGGAGCAGCGCGTAGCGGCGCTGGAAGGCGGTATT GGCGCCATTGCCACCGCCAGCGGACAGGCCGCCCTGCACCTGTCGATTGCCACGCTGATGGGCGCCGGCTCGCACATTGT TGCCAGCACCGCCCTCTATGGCGGCTCGCAAAACCTGCTGCACTACACGCTGCGCCGCTTCGGCATTGAAACCACCTTTG TGAAACCCGGCGACCTGGACGGCTGGCGCGCCGCCGTGCGCCCCAACACCAAGCTCCTGTTTGGTGAAACCGTGGGCAAT CCGGGGCTGGACGTGCTGGACATTTCCGCCGTGGCCGCCATTGCCCATGAAACCGGCGTGCCGCTGCTGGTCGATTCCAC CCTGACCTCGCCCTGGCTGATCAAGCCTTTCGACCACGGCGCCGACCTGGTGTACCACTCCGCGACCAAGTTTTTGAGCG GCCACGGCACGGTCATCGGCGGCGTCGTCGTCGACGGCGGCTCGTTTGACTGGGAAAAGTCGGGCAAGTTTGCCGAGTTG ACCCAAGCCTATGACGGCTTTCACAACATGGTGTTCAGCGAGGAAAGCACCGTGGGCGCCTTTTTGCTGCGCGCGCGCCG CGAAGGACTGCGCGACTTCGGCGCCTGCATGAGCCCGCACACCGCCTGGCTGATCCTGCAGGGCATTGAAACCCTGCCGC TGCGCATGGCGCGGCACATGAGCAACACTGAAAAAGTGGTGGACTTCCTGGCCAGCCACCCCTTTGTGGCACGCGTAGGC CACCCGATGCTGGAATCACACCCCAGCTACGCGCTGGCCAGGCAGTTGCTGCCGCGCGGGGCGGGTTCGGTGTTCAGCTT TGACCTGAAAGGCAGCCGCGAGCAGGGCGAAACCTTTGTTGAAACCCTCAAGGTCTTCAGCCACCTGGCCAATGTGGGCG ACTGCCGCAGCCTGGTGATTCACCCGGCCAGTACCACGCACTTCCGGATGACGGATGAAGCGCTGCTCGGCGCCGGCATC ACGCAGGGCACGATTCGCCTGTCGATCGGTCTGGAGGATCCGGACGATCTGGTGGACGACCTGAAGCGAGCCCTCAAGGC TGCCGAGAAAGCGGGTGCCTGA
Upstream 100 bases:
>100_bases TTAAATATAGCCCACAATCAAGCAGCGGGCTGTAACGATTTTCCGGCTTTCGCAGCCAGGTACCGCCCGCAGCCCACGCT TTTTCTACTGGAGACTTCCC
Downstream 100 bases:
>100_bases CATGGACATCACCGTCAACGGCCACAAAACCTATTGCTACACCGGTGGTAAAGCGTTTGATGCCGCCAGGCCCACCGTGG TGTTTGTCCACGGCGTGCTC
Product: O-acetylhomoserine aminocarboxypropyltransferase
Products: NA
Alternate protein names: L-methioninase [H]
Number of amino acids: Translated: 433; Mature: 432
Protein sequence:
>433_residues MSGYSDPGFDTLALHAGAAPDPATGARAVPIYLTTSFVFESSDHAASLFNLERAGHVYSRISNPTNAVLEQRVAALEGGI GAIATASGQAALHLSIATLMGAGSHIVASTALYGGSQNLLHYTLRRFGIETTFVKPGDLDGWRAAVRPNTKLLFGETVGN PGLDVLDISAVAAIAHETGVPLLVDSTLTSPWLIKPFDHGADLVYHSATKFLSGHGTVIGGVVVDGGSFDWEKSGKFAEL TQAYDGFHNMVFSEESTVGAFLLRARREGLRDFGACMSPHTAWLILQGIETLPLRMARHMSNTEKVVDFLASHPFVARVG HPMLESHPSYALARQLLPRGAGSVFSFDLKGSREQGETFVETLKVFSHLANVGDCRSLVIHPASTTHFRMTDEALLGAGI TQGTIRLSIGLEDPDDLVDDLKRALKAAEKAGA
Sequences:
>Translated_433_residues MSGYSDPGFDTLALHAGAAPDPATGARAVPIYLTTSFVFESSDHAASLFNLERAGHVYSRISNPTNAVLEQRVAALEGGI GAIATASGQAALHLSIATLMGAGSHIVASTALYGGSQNLLHYTLRRFGIETTFVKPGDLDGWRAAVRPNTKLLFGETVGN PGLDVLDISAVAAIAHETGVPLLVDSTLTSPWLIKPFDHGADLVYHSATKFLSGHGTVIGGVVVDGGSFDWEKSGKFAEL TQAYDGFHNMVFSEESTVGAFLLRARREGLRDFGACMSPHTAWLILQGIETLPLRMARHMSNTEKVVDFLASHPFVARVG HPMLESHPSYALARQLLPRGAGSVFSFDLKGSREQGETFVETLKVFSHLANVGDCRSLVIHPASTTHFRMTDEALLGAGI TQGTIRLSIGLEDPDDLVDDLKRALKAAEKAGA >Mature_432_residues SGYSDPGFDTLALHAGAAPDPATGARAVPIYLTTSFVFESSDHAASLFNLERAGHVYSRISNPTNAVLEQRVAALEGGIG AIATASGQAALHLSIATLMGAGSHIVASTALYGGSQNLLHYTLRRFGIETTFVKPGDLDGWRAAVRPNTKLLFGETVGNP GLDVLDISAVAAIAHETGVPLLVDSTLTSPWLIKPFDHGADLVYHSATKFLSGHGTVIGGVVVDGGSFDWEKSGKFAELT QAYDGFHNMVFSEESTVGAFLLRARREGLRDFGACMSPHTAWLILQGIETLPLRMARHMSNTEKVVDFLASHPFVARVGH PMLESHPSYALARQLLPRGAGSVFSFDLKGSREQGETFVETLKVFSHLANVGDCRSLVIHPASTTHFRMTDEALLGAGIT QGTIRLSIGLEDPDDLVDDLKRALKAAEKAGA
Specific function: Methionine biosynthesis; second step. [C]
COG id: COG2873
COG function: function code E; O-acetylhomoserine sulfhydrylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the trans-sulfuration enzymes family [H]
Homologues:
Organism=Homo sapiens, GI21361334, Length=423, Percent_Identity=35.4609929078014, Blast_Score=195, Evalue=7e-50, Organism=Homo sapiens, GI299473759, Length=423, Percent_Identity=32.6241134751773, Blast_Score=159, Evalue=4e-39, Organism=Homo sapiens, GI25453487, Length=422, Percent_Identity=31.2796208530806, Blast_Score=144, Evalue=1e-34, Organism=Escherichia coli, GI1790375, Length=421, Percent_Identity=33.729216152019, Blast_Score=212, Evalue=3e-56, Organism=Escherichia coli, GI1789383, Length=427, Percent_Identity=28.3372365339578, Blast_Score=142, Evalue=3e-35, Organism=Caenorhabditis elegans, GI71980708, Length=404, Percent_Identity=33.1683168316832, Blast_Score=222, Evalue=3e-58, Organism=Caenorhabditis elegans, GI17538055, Length=426, Percent_Identity=33.0985915492958, Blast_Score=189, Evalue=3e-48, Organism=Caenorhabditis elegans, GI17560056, Length=427, Percent_Identity=32.0843091334895, Blast_Score=184, Evalue=7e-47, Organism=Saccharomyces cerevisiae, GI6323333, Length=432, Percent_Identity=42.8240740740741, Blast_Score=314, Evalue=1e-86, Organism=Saccharomyces cerevisiae, GI6319307, Length=426, Percent_Identity=33.5680751173709, Blast_Score=187, Evalue=3e-48, Organism=Saccharomyces cerevisiae, GI6321254, Length=447, Percent_Identity=26.6219239373602, Blast_Score=116, Evalue=8e-27, Organism=Saccharomyces cerevisiae, GI6321170, Length=354, Percent_Identity=25.7062146892655, Blast_Score=111, Evalue=2e-25, Organism=Saccharomyces cerevisiae, GI6321904, Length=430, Percent_Identity=26.5116279069767, Blast_Score=107, Evalue=4e-24, Organism=Drosophila melanogaster, GI19922554, Length=428, Percent_Identity=34.8130841121495, Blast_Score=229, Evalue=4e-60,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000277 - InterPro: IPR006237 - InterPro: IPR015424 - InterPro: IPR015421 - InterPro: IPR015422 [H]
Pfam domain/function: PF01053 Cys_Met_Meta_PP [H]
EC number: =4.4.1.11 [H]
Molecular weight: Translated: 46085; Mature: 45953
Theoretical pI: Translated: 6.38; Mature: 6.38
Prosite motif: PS00868 CYS_MET_METAB_PP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGYSDPGFDTLALHAGAAPDPATGARAVPIYLTTSFVFESSDHAASLFNLERAGHVYSR CCCCCCCCCCEEEEECCCCCCCCCCCEEEEEEEEEEEEEECCCCHHHHHHHHHHHHHHHH ISNPTNAVLEQRVAALEGGIGAIATASGQAALHLSIATLMGAGSHIVASTALYGGSQNLL HCCHHHHHHHHHHHHHHCCCCEEEECCCCEEEEEEHHHHHCCCCHHHHHHHHCCCCCHHH HYTLRRFGIETTFVKPGDLDGWRAAVRPNTKLLFGETVGNPGLDVLDISAVAAIAHETGV HHHHHHHCCCEEEECCCCCCCCEEECCCCCEEEEEECCCCCCCCEEHHHHHHHHHHHCCC PLLVDSTLTSPWLIKPFDHGADLVYHSATKFLSGHGTVIGGVVVDGGSFDWEKSGKFAEL CEEEECCCCCCEEECCCCCCCCHHHHHHHHHHCCCCEEEEEEEEECCCCCCCCCCCHHHH TQAYDGFHNMVFSEESTVGAFLLRARREGLRDFGACMSPHTAWLILQGIETLPLRMARHM HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHC SNTEKVVDFLASHPFVARVGHPMLESHPSYALARQLLPRGAGSVFSFDLKGSREQGETFV CCHHHHHHHHHCCCHHHHCCCHHHHCCCCHHHHHHHHCCCCCCEEEEECCCCHHHHHHHH ETLKVFSHLANVGDCRSLVIHPASTTHFRMTDEALLGAGITQGTIRLSIGLEDPDDLVDD HHHHHHHHHHCCCCCCEEEEECCCCCEEEECHHHHHCCCCCCCEEEEEECCCCHHHHHHH LKRALKAAEKAGA HHHHHHHHHHCCC >Mature Secondary Structure SGYSDPGFDTLALHAGAAPDPATGARAVPIYLTTSFVFESSDHAASLFNLERAGHVYSR CCCCCCCCCEEEEECCCCCCCCCCCEEEEEEEEEEEEEECCCCHHHHHHHHHHHHHHHH ISNPTNAVLEQRVAALEGGIGAIATASGQAALHLSIATLMGAGSHIVASTALYGGSQNLL HCCHHHHHHHHHHHHHHCCCCEEEECCCCEEEEEEHHHHHCCCCHHHHHHHHCCCCCHHH HYTLRRFGIETTFVKPGDLDGWRAAVRPNTKLLFGETVGNPGLDVLDISAVAAIAHETGV HHHHHHHCCCEEEECCCCCCCCEEECCCCCEEEEEECCCCCCCCEEHHHHHHHHHHHCCC PLLVDSTLTSPWLIKPFDHGADLVYHSATKFLSGHGTVIGGVVVDGGSFDWEKSGKFAEL CEEEECCCCCCEEECCCCCCCCHHHHHHHHHHCCCCEEEEEEEEECCCCCCCCCCCHHHH TQAYDGFHNMVFSEESTVGAFLLRARREGLRDFGACMSPHTAWLILQGIETLPLRMARHM HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHC SNTEKVVDFLASHPFVARVGHPMLESHPSYALARQLLPRGAGSVFSFDLKGSREQGETFV CCHHHHHHHHHCCCHHHHCCCHHHHCCCCHHHHHHHHCCCCCCEEEEECCCCHHHHHHHH ETLKVFSHLANVGDCRSLVIHPASTTHFRMTDEALLGAGITQGTIRLSIGLEDPDDLVDD HHHHHHHHHHCCCCCCEEEEECCCCCEEEECHHHHHCCCCCCCEEEEEECCCCHHHHHHH LKRALKAAEKAGA HHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8586629; 9190812; 3365412 [H]