Definition | Polaromonas sp. JS666 chromosome, complete genome. |
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Accession | NC_007948 |
Length | 5,200,264 |
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The map label for this gene is 91787717
Identifier: 91787717
GI number: 91787717
Start: 1898878
End: 1900437
Strand: Reverse
Name: 91787717
Synonym: Bpro_1838
Alternate gene names: NA
Gene position: 1900437-1898878 (Counterclockwise)
Preceding gene: 91787718
Following gene: 91787715
Centisome position: 36.55
GC content: 62.56
Gene sequence:
>1560_bases ATGAAAAAAACCCTCCTCACTCGCCTCCTGGCGCTCAGCGTGTACGCAACAGCGCTCGCCATTGGCGCACCAGCGGCCCT CGCCCAGGCGGTCGATCCCCCGGCTACCCATCCCTACGCGCAGTCGCAGCCGATTCCCGGGCGTTACATCGTGGTGTTCA AGGACAGTGTGGCCAACCCGGCCGCGGAAGCCGCCAACCTGACACGCGGGCTGGGCGGGCAACTGCACCATACCTATACC AGCGCCCTCAAGGGCTTTGCCGCCAGCCTGCCGGACGCGGCGCTGCAGGGCATACGCAATAACCCGAACGTGGACTACAT CGAGCAGGACCAGACGGTTTCGCTCAATGAAGCCAAGTTATCGTCGACGCAAGTGCAGAGCACCGCAACTTGGGGGTTGG ATCGAATCGACCAGACCGATCGCCCCCTCGACACCTGGTACCACTACAACTACACCGGCGCGGGCGTGAATGCCTTCATC ATCGACACCGGCATTCTCGCGACGCACACCGACTTCCAAGGCCGTGTGCAATCCGGCTACACCGCAATTACCGATAACAA TAGCACCAACGACTGCAATGGTCACGGCACGCATGTCGCCGGCACTGTGGGTGGCTTAACCTGGGGCGTGGCCAAGGGGG TTGCACTGATTCCAGTGCGCGTACTCGATTGCAGTGGTTCCGGCACCTGGAGCGGCGTGATTGCCGGCATTAATTGGGTG ATCGGGCAAGCCACCAAGTCTCCAAATCCGCTGCTCCCCGCCGTGGCCAACATGTCGCTGGGTGGTGGCGCATCCCCAGC GGTGGACACCGCCGTGGCAAATGCCGTGAACAACGGCGTGACCATGGTGGTGGCGGCCGGCAACAGCAGCGCCGATGCCT GCAGATATTCTCCGGCCCGGGAACCAAGCGCCATCACGGTGGGCGCAACCACCAGCAGCGACAAGCGCGCCTTCTACTCG AACTATGGCAAGTGTCTGGACCTTTTCGCGCCAGGCAGCAGCATCACCTCGGCCTCGATTTCCAGCAACGATGCGTCGAC TATCAAAAGCGGCACTTCAATGGCATCGCCCCACGTAGCCGGGGTCGCCGCGCTGGCGCTGGCAGAAAAACCCGCGACAT TGCCTGCGGGCATTGCCTCCTTCCTGACCGACAATGCCACGCGCAACAAGCTCGGTTCGATCGGACGAGGCTCGCCCAAC CTGCTCGTTTATTCCCTGGGAACGACGTGGGCATCAACGTCCGTGGCGATCTCGTCCATAACCGATAGCACGCTCAGCGG TCGCAATGGCTGGAACGCCTCGGCCACGGTGACGGTTCGCAAGCGGAACAGCGACTGGAGTATCGGTGATCCCGCAGCCG GCGCCACCGTCACGGGCAGCTTCTCACCAGGCGGCTCGGTCAGTTGCGTGACGGACCCCAGCGGCAGTTGCACACTGACC AGTTCCATCATCCGGAGCACAGATTCGGCCAAGGTCACCGTGACCGGCATCTCCGGTCCGCTGATGACCTACGACGCGAG CCAGAACGCCGTCACTGAAATTGTCATCGCAAAACCCTGA
Upstream 100 bases:
>100_bases GGACGATGTGGGAGTCTGTAAAACGGCTTGACCCCCCAGCATGACAAGCACAGAATCGAGAGTGCTCTTTCATTGTCCCA GCATCCATGTCGGGGTCATC
Downstream 100 bases:
>100_bases CTCCGGTTGACGCCAAGGCGCGCCAAGCGGGTTGTGCCAAGCTCACGGCAGCTTGGACTCGCCCTCTTCTTCCTGCCCGG CCGGCCAGTCGCGGATGTAA
Product: peptidase S8/S53 subtilisin kexin sedolisin
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 519; Mature: 519
Protein sequence:
>519_residues MKKTLLTRLLALSVYATALAIGAPAALAQAVDPPATHPYAQSQPIPGRYIVVFKDSVANPAAEAANLTRGLGGQLHHTYT SALKGFAASLPDAALQGIRNNPNVDYIEQDQTVSLNEAKLSSTQVQSTATWGLDRIDQTDRPLDTWYHYNYTGAGVNAFI IDTGILATHTDFQGRVQSGYTAITDNNSTNDCNGHGTHVAGTVGGLTWGVAKGVALIPVRVLDCSGSGTWSGVIAGINWV IGQATKSPNPLLPAVANMSLGGGASPAVDTAVANAVNNGVTMVVAAGNSSADACRYSPAREPSAITVGATTSSDKRAFYS NYGKCLDLFAPGSSITSASISSNDASTIKSGTSMASPHVAGVAALALAEKPATLPAGIASFLTDNATRNKLGSIGRGSPN LLVYSLGTTWASTSVAISSITDSTLSGRNGWNASATVTVRKRNSDWSIGDPAAGATVTGSFSPGGSVSCVTDPSGSCTLT SSIIRSTDSAKVTVTGISGPLMTYDASQNAVTEIVIAKP
Sequences:
>Translated_519_residues MKKTLLTRLLALSVYATALAIGAPAALAQAVDPPATHPYAQSQPIPGRYIVVFKDSVANPAAEAANLTRGLGGQLHHTYT SALKGFAASLPDAALQGIRNNPNVDYIEQDQTVSLNEAKLSSTQVQSTATWGLDRIDQTDRPLDTWYHYNYTGAGVNAFI IDTGILATHTDFQGRVQSGYTAITDNNSTNDCNGHGTHVAGTVGGLTWGVAKGVALIPVRVLDCSGSGTWSGVIAGINWV IGQATKSPNPLLPAVANMSLGGGASPAVDTAVANAVNNGVTMVVAAGNSSADACRYSPAREPSAITVGATTSSDKRAFYS NYGKCLDLFAPGSSITSASISSNDASTIKSGTSMASPHVAGVAALALAEKPATLPAGIASFLTDNATRNKLGSIGRGSPN LLVYSLGTTWASTSVAISSITDSTLSGRNGWNASATVTVRKRNSDWSIGDPAAGATVTGSFSPGGSVSCVTDPSGSCTLT SSIIRSTDSAKVTVTGISGPLMTYDASQNAVTEIVIAKP >Mature_519_residues MKKTLLTRLLALSVYATALAIGAPAALAQAVDPPATHPYAQSQPIPGRYIVVFKDSVANPAAEAANLTRGLGGQLHHTYT SALKGFAASLPDAALQGIRNNPNVDYIEQDQTVSLNEAKLSSTQVQSTATWGLDRIDQTDRPLDTWYHYNYTGAGVNAFI IDTGILATHTDFQGRVQSGYTAITDNNSTNDCNGHGTHVAGTVGGLTWGVAKGVALIPVRVLDCSGSGTWSGVIAGINWV IGQATKSPNPLLPAVANMSLGGGASPAVDTAVANAVNNGVTMVVAAGNSSADACRYSPAREPSAITVGATTSSDKRAFYS NYGKCLDLFAPGSSITSASISSNDASTIKSGTSMASPHVAGVAALALAEKPATLPAGIASFLTDNATRNKLGSIGRGSPN LLVYSLGTTWASTSVAISSITDSTLSGRNGWNASATVTVRKRNSDWSIGDPAAGATVTGSFSPGGSVSCVTDPSGSCTLT SSIIRSTDSAKVTVTGISGPLMTYDASQNAVTEIVIAKP
Specific function: Serine proteinase with preferred activity for amino acids with aromatic side groups at the P1' side of the scissible bond [H]
COG id: COG1404
COG function: function code O; Subtilisin-like serine proteases
Gene ontology:
Cell location: Secreted [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase S8 family [H]
Homologues:
Organism=Homo sapiens, GI31317307, Length=363, Percent_Identity=33.0578512396694, Blast_Score=172, Evalue=6e-43, Organism=Saccharomyces cerevisiae, GI6320775, Length=448, Percent_Identity=37.2767857142857, Blast_Score=245, Evalue=1e-65, Organism=Saccharomyces cerevisiae, GI6324576, Length=342, Percent_Identity=40.0584795321637, Blast_Score=236, Evalue=6e-63, Organism=Saccharomyces cerevisiae, GI6319893, Length=267, Percent_Identity=40.0749063670412, Blast_Score=182, Evalue=9e-47,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000209 - InterPro: IPR022398 - InterPro: IPR015500 - InterPro: IPR009020 - InterPro: IPR010259 [H]
Pfam domain/function: PF05922 Inhibitor_I9; PF00082 Peptidase_S8 [H]
EC number: NA
Molecular weight: Translated: 52914; Mature: 52914
Theoretical pI: Translated: 7.53; Mature: 7.53
Prosite motif: PS00136 SUBTILASE_ASP ; PS00137 SUBTILASE_HIS ; PS00138 SUBTILASE_SER
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKTLLTRLLALSVYATALAIGAPAALAQAVDPPATHPYAQSQPIPGRYIVVFKDSVANP CCHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCCCC AAEAANLTRGLGGQLHHTYTSALKGFAASLPDAALQGIRNNPNVDYIEQDQTVSLNEAKL HHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCEEECCCEEECCHHHC SSTQVQSTATWGLDRIDQTDRPLDTWYHYNYTGAGVNAFIIDTGILATHTDFQGRVQSGY CHHHHHHHHHCCCHHCCCCCCCCHHEEEEEEECCCCEEEEEECCEEEECCCCCCHHCCCE TAITDNNSTNDCNGHGTHVAGTVGGLTWGVAKGVALIPVRVLDCSGSGTWSGVIAGINWV EEEECCCCCCCCCCCCCEEEECCCCHHHHHHCCEEEEEEEEEECCCCCCCHHHHCCCEEE IGQATKSPNPLLPAVANMSLGGGASPAVDTAVANAVNNGVTMVVAAGNSSADACRYSPAR EECCCCCCCCCCHHHHCCCCCCCCCCHHHHHHHHHHCCCEEEEEECCCCCCCHHCCCCCC EPSAITVGATTSSDKRAFYSNYGKCLDLFAPGSSITSASISSNDASTIKSGTSMASPHVA CCCEEEEECCCCCCCHHHHHCCCCEEEEECCCCCCCCCCCCCCCHHHHHCCCCCCCCHHH GVAALALAEKPATLPAGIASFLTDNATRNKLGSIGRGSPNLLVYSLGTTWASTSVAISSI HHHHHHHHCCCCCCHHHHHHHHHCCCHHHHHCCCCCCCCCEEEEECCCCCCCCEEEEECC TDSTLSGRNGWNASATVTVRKRNSDWSIGDPAAGATVTGSFSPGGSVSCVTDPSGSCTLT CCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCEEEECCCCCCCEEEEECCCCCEEEE SSIIRSTDSAKVTVTGISGPLMTYDASQNAVTEIVIAKP HHHHCCCCCCEEEEEECCCCEEEECCCCCCEEEEEEECC >Mature Secondary Structure MKKTLLTRLLALSVYATALAIGAPAALAQAVDPPATHPYAQSQPIPGRYIVVFKDSVANP CCHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCCCC AAEAANLTRGLGGQLHHTYTSALKGFAASLPDAALQGIRNNPNVDYIEQDQTVSLNEAKL HHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCEEECCCEEECCHHHC SSTQVQSTATWGLDRIDQTDRPLDTWYHYNYTGAGVNAFIIDTGILATHTDFQGRVQSGY CHHHHHHHHHCCCHHCCCCCCCCHHEEEEEEECCCCEEEEEECCEEEECCCCCCHHCCCE TAITDNNSTNDCNGHGTHVAGTVGGLTWGVAKGVALIPVRVLDCSGSGTWSGVIAGINWV EEEECCCCCCCCCCCCCEEEECCCCHHHHHHCCEEEEEEEEEECCCCCCCHHHHCCCEEE IGQATKSPNPLLPAVANMSLGGGASPAVDTAVANAVNNGVTMVVAAGNSSADACRYSPAR EECCCCCCCCCCHHHHCCCCCCCCCCHHHHHHHHHHCCCEEEEEECCCCCCCHHCCCCCC EPSAITVGATTSSDKRAFYSNYGKCLDLFAPGSSITSASISSNDASTIKSGTSMASPHVA CCCEEEEECCCCCCCHHHHHCCCCEEEEECCCCCCCCCCCCCCCHHHHHCCCCCCCCHHH GVAALALAEKPATLPAGIASFLTDNATRNKLGSIGRGSPNLLVYSLGTTWASTSVAISSI HHHHHHHHCCCCCCHHHHHHHHHCCCHHHHHCCCCCCCCCEEEEECCCCCCCCEEEEECC TDSTLSGRNGWNASATVTVRKRNSDWSIGDPAAGATVTGSFSPGGSVSCVTDPSGSCTLT CCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCEEEECCCCCCCEEEEECCCCCEEEE SSIIRSTDSAKVTVTGISGPLMTYDASQNAVTEIVIAKP HHHHCCCCCCEEEEEECCCCEEEECCCCCCEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7551039; 1499549 [H]