The gene/protein map for NC_007948 is currently unavailable.
Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

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The map label for this gene is olpB [H]

Identifier: 91787330

GI number: 91787330

Start: 1483805

End: 1485106

Strand: Direct

Name: olpB [H]

Synonym: Bpro_1435

Alternate gene names: 91787330

Gene position: 1483805-1485106 (Clockwise)

Preceding gene: 91787329

Following gene: 91787342

Centisome position: 28.53

GC content: 67.43

Gene sequence:

>1302_bases
ATGTCCAACGGTAAAAACACATCGCCACCGGCTGGCGCCCACGATAAGGCTTCGATCGCGAGCGCGATCGACAAGGTCAA
CCGGCAGGTCAAGGCGCTGCGGACTTTCGATGTCTCGGTCGCGAAGAATGGATGGGACTCGACCATGGATGCCTTGCAAA
AGAAAGTCAACGCCATCCTCGCCGACAGCCTCGGCATGGGCACGCCTGAGTACAGGCAATATGCCGTGGCGACGCAGGAC
TTCCTGCTGGATACGACTTTTGGTGACCGCTACACGGTCGACGAGCGCAAGCAAAGAGTCAAGCATGGGGTCGATCGGGC
CATCGCCAACCTGAATGCGACCAAGAAGCTGTTGACGGACCGCCTGGAGGGCCGCGCCGCTGCCGCGCCGAAGGCTGCCC
CGGCTGCTGAGGTGAAGCCGCCGCCAGCGCCGGCACCGGCAGCAGCGCCAGCACCAGCACCAGCACCAGCACCAGCACCA
GCACCAGCACCAGCACCAGCGCCAGCGCCAGCACCAGCGCCAGCACCAGCACCAGCACCAGCACCAGCACCAGCACCAGC
ACCAGCACCAGCACCAGCACCAGCACCAGCACCAGCACCGGCACCAGCACCGGCACCAGCACCAGCGCCAGCACCGGCAC
CGGCACCAGCGCCAGCACCGGCACCAGCACCAGCACCAGCGCCAGCGCCAGCACCAGCACCAGCACCAGCGCCAGCACCA
GCACCAGCACCAGCACCAGCGCCAGCACCGGCACCGGCACCGGCACCAGCGCCAGCACCAGCGCCAGCGCCGGCACCGGC
ACCGCCGCCGGCCCCGGCACCGACGCCGGCCCCGGCACCGACGCCTTCAGTTCCCCCTGTTACCATGATGCCCATGTCCA
AGGCCGATCCCTCATCCATCACAGCCCAGCAAGCCGTTCCCGGCACACGCGTGGCCGTCCTTGGCTGGGGCGGCGACGCT
GCGGGCCAGGCGTGCGAGTTCATGGAGCAGCTGGGGCTGGAGGCGGCGGTACTCGACACCGTCTCTGTCGATCAACTTGA
TGCTTTGCGCAATGTGGCGTTCCTGCTGCTCCTGCCGGGGGAAGAGCCCGAGGCACCGGCAGCCATGCTGGCCATCGGAT
TCATGCTTGCCGTACTCGGCCGCAGTCGCATCGTCTGCCTGCTGTCCGACCAGGAGGCATTGCCGGACGCCTTGAAGGGC
GCAACACGTATCACGGTCGATGAGGCGGGCTTGTGGCGGCTGCTGCTGGCGCGCGAGATGAAGCGGGCAGGCCTGGACGT
GGACCTGAACCGCGCCATCTAA

Upstream 100 bases:

>100_bases
CGCAGGCAGGCTTGGAGCCGCGGCACTCAGCCCCCTCGGGGGCCATAAAGTCTGCGTCATGGACGCGTTAAAGTTCAGGC
TGGTTGCATAAGGAGTCTGC

Downstream 100 bases:

>100_bases
GAAATAAGTTGCACATTTTGCTCGCCAGCTTCGGGCGCGCTGCGTTGTTGCGACTCGCTTGTGTGGCTTGGCCACACGGC
GCTCCCCGCGCCTGGCAGCG

Product: hypothetical protein

Products: NA

Alternate protein names: Outer layer protein B; S-layer protein 1 [H]

Number of amino acids: Translated: 433; Mature: 432

Protein sequence:

>433_residues
MSNGKNTSPPAGAHDKASIASAIDKVNRQVKALRTFDVSVAKNGWDSTMDALQKKVNAILADSLGMGTPEYRQYAVATQD
FLLDTTFGDRYTVDERKQRVKHGVDRAIANLNATKKLLTDRLEGRAAAAPKAAPAAEVKPPPAPAPAAAPAPAPAPAPAP
APAPAPAPAPAPAPAPAPAPAPAPAPAPAPAPAPAPAPAPAPAPAPAPAPAPAPAPAPAPAPAPAPAPAPAPAPAPAPAP
APAPAPAPAPAPAPAPAPAPAPAPAPAPPPAPAPTPAPAPTPSVPPVTMMPMSKADPSSITAQQAVPGTRVAVLGWGGDA
AGQACEFMEQLGLEAAVLDTVSVDQLDALRNVAFLLLLPGEEPEAPAAMLAIGFMLAVLGRSRIVCLLSDQEALPDALKG
ATRITVDEAGLWRLLLAREMKRAGLDVDLNRAI

Sequences:

>Translated_433_residues
MSNGKNTSPPAGAHDKASIASAIDKVNRQVKALRTFDVSVAKNGWDSTMDALQKKVNAILADSLGMGTPEYRQYAVATQD
FLLDTTFGDRYTVDERKQRVKHGVDRAIANLNATKKLLTDRLEGRAAAAPKAAPAAEVKPPPAPAPAAAPAPAPAPAPAP
APAPAPAPAPAPAPAPAPAPAPAPAPAPAPAPAPAPAPAPAPAPAPAPAPAPAPAPAPAPAPAPAPAPAPAPAPAPAPAP
APAPAPAPAPAPAPAPAPAPAPAPAPAPPPAPAPTPAPAPTPSVPPVTMMPMSKADPSSITAQQAVPGTRVAVLGWGGDA
AGQACEFMEQLGLEAAVLDTVSVDQLDALRNVAFLLLLPGEEPEAPAAMLAIGFMLAVLGRSRIVCLLSDQEALPDALKG
ATRITVDEAGLWRLLLAREMKRAGLDVDLNRAI
>Mature_432_residues
SNGKNTSPPAGAHDKASIASAIDKVNRQVKALRTFDVSVAKNGWDSTMDALQKKVNAILADSLGMGTPEYRQYAVATQDF
LLDTTFGDRYTVDERKQRVKHGVDRAIANLNATKKLLTDRLEGRAAAAPKAAPAAEVKPPPAPAPAAAPAPAPAPAPAPA
PAPAPAPAPAPAPAPAPAPAPAPAPAPAPAPAPAPAPAPAPAPAPAPAPAPAPAPAPAPAPAPAPAPAPAPAPAPAPAPA
PAPAPAPAPAPAPAPAPAPAPAPAPAPPPAPAPTPAPAPTPSVPPVTMMPMSKADPSSITAQQAVPGTRVAVLGWGGDAA
GQACEFMEQLGLEAAVLDTVSVDQLDALRNVAFLLLLPGEEPEAPAAMLAIGFMLAVLGRSRIVCLLSDQEALPDALKGA
TRITVDEAGLWRLLLAREMKRAGLDVDLNRAI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Secreted, cell wall, S-layer [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 3 SLH (S-layer homology) domains [H]

Homologues:

Organism=Homo sapiens, GI32483416, Length=150, Percent_Identity=34, Blast_Score=69, Evalue=1e-11,
Organism=Drosophila melanogaster, GI24654378, Length=181, Percent_Identity=51.3812154696133, Blast_Score=65, Evalue=7e-11,
Organism=Drosophila melanogaster, GI24639970, Length=101, Percent_Identity=46.5346534653465, Blast_Score=65, Evalue=9e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008965
- InterPro:   IPR002102
- InterPro:   IPR018452
- InterPro:   IPR001119 [H]

Pfam domain/function: PF00963 Cohesin; PF00395 SLH [H]

EC number: NA

Molecular weight: Translated: 43016; Mature: 42884

Theoretical pI: Translated: 6.55; Mature: 6.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNGKNTSPPAGAHDKASIASAIDKVNRQVKALRTFDVSVAKNGWDSTMDALQKKVNAIL
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
ADSLGMGTPEYRQYAVATQDFLLDTTFGDRYTVDERKQRVKHGVDRAIANLNATKKLLTD
HHHHCCCCHHHHHHHHHHHHHEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RLEGRAAAAPKAAPAAEVKPPPAPAPAAAPAPAPAPAPAPAPAPAPAPAPAPAPAPAPAP
HHCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
APAPAPAPAPAPAPAPAPAPAPAPAPAPAPAPAPAPAPAPAPAPAPAPAPAPAPAPAPAP
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
APAPAPAPAPAPAPAPAPAPAPAPAPAPPPAPAPTPAPAPTPSVPPVTMMPMSKADPSSI
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCHH
TAQQAVPGTRVAVLGWGGDAAGQACEFMEQLGLEAAVLDTVSVDQLDALRNVAFLLLLPG
HHHHCCCCCEEEEEECCCCHHHHHHHHHHHHCCCEEHHHHCCHHHHHHHHHCEEEEEECC
EEPEAPAAMLAIGFMLAVLGRSRIVCLLSDQEALPDALKGATRITVDEAGLWRLLLAREM
CCCCCHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHCCCEEEEECCCHHHHHHHHHHH
KRAGLDVDLNRAI
HHCCCCCCHHCCC
>Mature Secondary Structure 
SNGKNTSPPAGAHDKASIASAIDKVNRQVKALRTFDVSVAKNGWDSTMDALQKKVNAIL
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
ADSLGMGTPEYRQYAVATQDFLLDTTFGDRYTVDERKQRVKHGVDRAIANLNATKKLLTD
HHHHCCCCHHHHHHHHHHHHHEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RLEGRAAAAPKAAPAAEVKPPPAPAPAAAPAPAPAPAPAPAPAPAPAPAPAPAPAPAPAP
HHCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
APAPAPAPAPAPAPAPAPAPAPAPAPAPAPAPAPAPAPAPAPAPAPAPAPAPAPAPAPAP
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
APAPAPAPAPAPAPAPAPAPAPAPAPAPPPAPAPTPAPAPTPSVPPVTMMPMSKADPSSI
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCHH
TAQQAVPGTRVAVLGWGGDAAGQACEFMEQLGLEAAVLDTVSVDQLDALRNVAFLLLLPG
HHHHCCCCCEEEEEECCCCHHHHHHHHHHHHCCCEEHHHHCCHHHHHHHHHCEEEEEECC
EEPEAPAAMLAIGFMLAVLGRSRIVCLLSDQEALPDALKGATRITVDEAGLWRLLLAREM
CCCCCHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHCCCEEEEECCCHHHHHHHHHHH
KRAGLDVDLNRAI
HHCCCCCCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8458832 [H]