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The map label for this gene is czcR [H]

Identifier: 91787342

GI number: 91787342

Start: 1498582

End: 1499484

Strand: Direct

Name: czcR [H]

Synonym: Bpro_1448

Alternate gene names: 91787342

Gene position: 1498582-1499484 (Clockwise)

Preceding gene: 91787330

Following gene: 91787344

Centisome position: 28.82

GC content: 61.35

Gene sequence:

>903_bases
TTGAGCACCATTCGATTTCTCAGGACCTTTTTGGCTGTGGCACAAGAAGGCTCTTTCGCCGGGGCCTCCGAGCGGGTCGC
TTTGACGCAGGCTGCCGTCGGGCTGCAAATGCGGGCGCTGGAAGCCGAGCTGAAAACCGGGCTGTTTGAACGGTCGGGGC
GCGGCGTGCTGCTGACGGTGGCCGGGCGCGCCTTGATCGCCCATGCGGAAAAAATCATTGCCTGTTATGAGCAGATGCGC
GAAGGCCTGGAAGAAGAAAACGAGATCGCCGGCACGGTGACCGTGGGTTCGACGGTTTCGGCCATGGGCCTGCTGTCCAA
CACGGTGGTCGCCATGAAGCCGCGGTTTCCCCGCCTGAATGTGCGCCTGGTGGTGCAGGAGTCCAGCGGTCTGGCCCAGA
GTGTCATCAGTGGGGCGCTGGATGCCGCGGTCATGATCGAAGGCCCCCCGATGGAACGCCAGGGCTTGCTGTGGACGCCG
CTGTATGTGGAGCCCTTGACCCTGGTGGCCAGTTCGCTGGTAGCCGGGCCCGACAGCGACATCAAGAAGCTGCTGCGTGA
AAACCCGTTTTTGCGTTTTGATCGCCGCACCCCCAGCGGTATCCGTATCGAGCAGACCTTGCGCAAACTGGGCCTGATGC
CGCAGGACTTTCTGGAGCTGAGTTCGGTGTCCAGCATCATCGATCTGGTGCGCCAGAATGTCGGCGTCACCGTCGTGCCG
CATTGGAGAAATGCCGACTGGGTGAACGACCCCACATTGCGCGTCCTGTCGCTACCGGGCCGTCCGGCGACACGGCAGAT
CGGCATGCTTGAGCATGGGAAGCGTGAACACATTACGTCCGTGATCCGTCAACATCTGGTGAGTCTTCTTGCGAAGAAGG
CGCCTCCCCAGTTAAAAAATTGA

Upstream 100 bases:

>100_bases
CATCCAATCTAAAAAATATATCCATATTTTGTTTTGCAATGCTAAAGTTATCCTTTAGTATTTCTGGGTCCAATTTTGGC
CCAACAATGGGTTTTTTCCC

Downstream 100 bases:

>100_bases
GTTTCTAACCAGCGGGATGCTCCTGCGCCCCGAATGTGTGCCTGGAAGCGCTGGCCGGGCGCTGATCTGCTCCGCGGTCA
GCGCCGTGGACCTAAGTCCC

Product: LysR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 300; Mature: 299

Protein sequence:

>300_residues
MSTIRFLRTFLAVAQEGSFAGASERVALTQAAVGLQMRALEAELKTGLFERSGRGVLLTVAGRALIAHAEKIIACYEQMR
EGLEEENEIAGTVTVGSTVSAMGLLSNTVVAMKPRFPRLNVRLVVQESSGLAQSVISGALDAAVMIEGPPMERQGLLWTP
LYVEPLTLVASSLVAGPDSDIKKLLRENPFLRFDRRTPSGIRIEQTLRKLGLMPQDFLELSSVSSIIDLVRQNVGVTVVP
HWRNADWVNDPTLRVLSLPGRPATRQIGMLEHGKREHITSVIRQHLVSLLAKKAPPQLKN

Sequences:

>Translated_300_residues
MSTIRFLRTFLAVAQEGSFAGASERVALTQAAVGLQMRALEAELKTGLFERSGRGVLLTVAGRALIAHAEKIIACYEQMR
EGLEEENEIAGTVTVGSTVSAMGLLSNTVVAMKPRFPRLNVRLVVQESSGLAQSVISGALDAAVMIEGPPMERQGLLWTP
LYVEPLTLVASSLVAGPDSDIKKLLRENPFLRFDRRTPSGIRIEQTLRKLGLMPQDFLELSSVSSIIDLVRQNVGVTVVP
HWRNADWVNDPTLRVLSLPGRPATRQIGMLEHGKREHITSVIRQHLVSLLAKKAPPQLKN
>Mature_299_residues
STIRFLRTFLAVAQEGSFAGASERVALTQAAVGLQMRALEAELKTGLFERSGRGVLLTVAGRALIAHAEKIIACYEQMRE
GLEEENEIAGTVTVGSTVSAMGLLSNTVVAMKPRFPRLNVRLVVQESSGLAQSVISGALDAAVMIEGPPMERQGLLWTPL
YVEPLTLVASSLVAGPDSDIKKLLRENPFLRFDRRTPSGIRIEQTLRKLGLMPQDFLELSSVSSIIDLVRQNVGVTVVPH
WRNADWVNDPTLRVLSLPGRPATRQIGMLEHGKREHITSVIRQHLVSLLAKKAPPQLKN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH lysR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI87082132, Length=250, Percent_Identity=31.2, Blast_Score=75, Evalue=4e-15,
Organism=Escherichia coli, GI1787879, Length=245, Percent_Identity=26.530612244898, Blast_Score=75, Evalue=4e-15,
Organism=Escherichia coli, GI1788297, Length=243, Percent_Identity=27.5720164609054, Blast_Score=75, Evalue=8e-15,
Organism=Escherichia coli, GI157672245, Length=247, Percent_Identity=27.1255060728745, Blast_Score=71, Evalue=8e-14,
Organism=Escherichia coli, GI145693105, Length=243, Percent_Identity=24.6913580246914, Blast_Score=70, Evalue=2e-13,
Organism=Escherichia coli, GI1786713, Length=207, Percent_Identity=25.6038647342995, Blast_Score=66, Evalue=2e-12,
Organism=Escherichia coli, GI87082184, Length=307, Percent_Identity=23.1270358306189, Blast_Score=65, Evalue=6e-12,
Organism=Escherichia coli, GI1790399, Length=169, Percent_Identity=27.810650887574, Blast_Score=63, Evalue=3e-11,
Organism=Escherichia coli, GI1788626, Length=147, Percent_Identity=33.3333333333333, Blast_Score=62, Evalue=3e-11,
Organism=Escherichia coli, GI1788481, Length=292, Percent_Identity=25, Blast_Score=62, Evalue=6e-11,
Organism=Escherichia coli, GI1788748, Length=244, Percent_Identity=24.1803278688525, Blast_Score=62, Evalue=6e-11,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000847
- InterPro:   IPR005119
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00126 HTH_1; PF03466 LysR_substrate [H]

EC number: NA

Molecular weight: Translated: 32810; Mature: 32679

Theoretical pI: Translated: 10.34; Mature: 10.34

Prosite motif: PS50931 HTH_LYSR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTIRFLRTFLAVAQEGSFAGASERVALTQAAVGLQMRALEAELKTGLFERSGRGVLLTV
CCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEE
AGRALIAHAEKIIACYEQMREGLEEENEIAGTVTVGSTVSAMGLLSNTVVAMKPRFPRLN
CCHHHHHHHHHHHHHHHHHHHCCCHHHHCEEEEEECCHHHHHHHHHCCEEEECCCCCCCC
VRLVVQESSGLAQSVISGALDAAVMIEGPPMERQGLLWTPLYVEPLTLVASSLVAGPDSD
EEEEEECCCCHHHHHHHHHHCEEEEEECCCCCCCCCEECCHHHHHHHHHHHHHHCCCCHH
IKKLLRENPFLRFDRRTPSGIRIEQTLRKLGLMPQDFLELSSVSSIIDLVRQNVGVTVVP
HHHHHHCCCCEEEECCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCEEEEE
HWRNADWVNDPTLRVLSLPGRPATRQIGMLEHGKREHITSVIRQHLVSLLAKKAPPQLKN
CCCCCCCCCCCCEEEEECCCCCCHHHCCHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
STIRFLRTFLAVAQEGSFAGASERVALTQAAVGLQMRALEAELKTGLFERSGRGVLLTV
CHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEE
AGRALIAHAEKIIACYEQMREGLEEENEIAGTVTVGSTVSAMGLLSNTVVAMKPRFPRLN
CCHHHHHHHHHHHHHHHHHHHCCCHHHHCEEEEEECCHHHHHHHHHCCEEEECCCCCCCC
VRLVVQESSGLAQSVISGALDAAVMIEGPPMERQGLLWTPLYVEPLTLVASSLVAGPDSD
EEEEEECCCCHHHHHHHHHHCEEEEEECCCCCCCCCEECCHHHHHHHHHHHHHHCCCCHH
IKKLLRENPFLRFDRRTPSGIRIEQTLRKLGLMPQDFLELSSVSSIIDLVRQNVGVTVVP
HHHHHHCCCCEEEECCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCEEEEE
HWRNADWVNDPTLRVLSLPGRPATRQIGMLEHGKREHITSVIRQHLVSLLAKKAPPQLKN
CCCCCCCCCCCCEEEEECCCCCCHHHCCHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9099864; 9308178; 9384377 [H]