The gene/protein map for NC_007948 is currently unavailable.
Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

Click here to switch to the map view.

The map label for this gene is ttuD [H]

Identifier: 91787329

GI number: 91787329

Start: 1482281

End: 1483597

Strand: Direct

Name: ttuD [H]

Synonym: Bpro_1434

Alternate gene names: 91787329

Gene position: 1482281-1483597 (Clockwise)

Preceding gene: 91787328

Following gene: 91787330

Centisome position: 28.5

GC content: 67.05

Gene sequence:

>1317_bases
ATGACCGCACCCAACCCCGCCTCCCAGCCGCGCCAGTTTCTGGAGCATCTCTACCACGCGGCAGTGCAACGCGCGCTGCC
TTTGCACAACACGGCGGCGTATTTACCCAAACCACCCAAGGGCCGAACCATCGTCCTGGGTGCCGGCAAGGCCGGGGGTT
CCATGGTGCAGGCGGTCGAGGCCCTCTGGCCCGCTGACGCGCCGCTGGAGGGGCTGGTGGTCACGCGCTATCACCATATT
CCACCGCGGCCTGCGGGTTTGAAGCAACGCATAGAACTGGTCGAGGCGGCGCACCCGGTGCCGGATGCGGCGGGCCTGGC
GGCTGCGCAGCGCATCCTCGCCATGACGCAGGGCCTGACTGCCGACGACCTGGTGCTGTGCCTGATTTCCGGTGGCGGCT
CGTCTCTCCTGACATTGCCCGCCGAGGGCCTCACGCTGGAAGACAAGCAGCGCATCAACAAGGACCTGCTGAACAGCGGC
GCCAACATTGGCGAGATGAATTGCGTGCGCAAGCACCTGTCGCGCATCAAGGGCGGGCGGCTGGCCGCGGCCTGTGCGCC
GGCGCGCGTGATCACGCTCACCATCAGCGACGTGCCCGGCGATGACCCCTCCATCATTGCCAGCGGCCCGACCGTGCCCG
ATGCCAGCACCTGCGCCGAGGCTGTGGCCATCCTCGCGCGCTACGGCATCGCGATCCCGGGCGGGCTCATGAGCCTGCTG
GAGCAGGGCGCGCTCGAAACGCCCAAGCCCGGCGATGCGGCCTTCAACGGCCATGAGGTCCACATGATTGCCACACCGCA
GCAAAGCCTCGAAGCCGCCGCCGCCGTTGCCAGGGATGCGGGGCTGACGGCCTACATCCTCAGCGATGAGATGGAAGGCG
AGTCGCGCGAAGTCGGCAAGGTGCATGCGGCACTGGCCCGCGCGGTGGCGCTCAAGGGCCAGCCTTTCCAGAAACCTTGC
GTGATTCTGAGCGGTGGCGAAACCACGGTCACCATCAAAAAGCAGCCCGATGGCACCCCCAAAGGCAGGGGCGGGCGGGC
CGGCGAATTCTGCATGGGGCTGGCGCTGGGGCTGCAGGGGCAGGCGGGCGTCTACGCGCTGGCCGCAGACACCGATGGCA
TTGACGGTGTGGAAGACAACGCGGGCGCGTTCGTCGCCCCCGACACGCTGGAACGGGCGCTGGCCAAGGGCATGAAGCTG
AACCGCTACCTGGACCGCAACGATGCTTATGGCTACTTTGAGCCTCTGGGGGATCTGGTCATCACGGGGCCGACGAACAC
CAATGTCAATGATTTCCGGGCGATCCTGGTGCTGTAG

Upstream 100 bases:

>100_bases
GTTACGGCGGCACAATGACGGTCTGGGCGGGACAGCGGGCAGTGCCAGAAGCAGCGCTGTTCCATAAACTGCCTTCCAAT
AACCCGCAAGAGACATCCGA

Downstream 100 bases:

>100_bases
CCCCGTGCAGCGGGGCTTCCTGGCCGGTGCCGAGCCGCCTCAAAGCGGCGAGCCTTGCAGGCCGCGCTACTGCGAGACGC
AGTGGCTCTTCGTGCCGTCC

Product: hydroxypyruvate reductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 438; Mature: 437

Protein sequence:

>438_residues
MTAPNPASQPRQFLEHLYHAAVQRALPLHNTAAYLPKPPKGRTIVLGAGKAGGSMVQAVEALWPADAPLEGLVVTRYHHI
PPRPAGLKQRIELVEAAHPVPDAAGLAAAQRILAMTQGLTADDLVLCLISGGGSSLLTLPAEGLTLEDKQRINKDLLNSG
ANIGEMNCVRKHLSRIKGGRLAAACAPARVITLTISDVPGDDPSIIASGPTVPDASTCAEAVAILARYGIAIPGGLMSLL
EQGALETPKPGDAAFNGHEVHMIATPQQSLEAAAAVARDAGLTAYILSDEMEGESREVGKVHAALARAVALKGQPFQKPC
VILSGGETTVTIKKQPDGTPKGRGGRAGEFCMGLALGLQGQAGVYALAADTDGIDGVEDNAGAFVAPDTLERALAKGMKL
NRYLDRNDAYGYFEPLGDLVITGPTNTNVNDFRAILVL

Sequences:

>Translated_438_residues
MTAPNPASQPRQFLEHLYHAAVQRALPLHNTAAYLPKPPKGRTIVLGAGKAGGSMVQAVEALWPADAPLEGLVVTRYHHI
PPRPAGLKQRIELVEAAHPVPDAAGLAAAQRILAMTQGLTADDLVLCLISGGGSSLLTLPAEGLTLEDKQRINKDLLNSG
ANIGEMNCVRKHLSRIKGGRLAAACAPARVITLTISDVPGDDPSIIASGPTVPDASTCAEAVAILARYGIAIPGGLMSLL
EQGALETPKPGDAAFNGHEVHMIATPQQSLEAAAAVARDAGLTAYILSDEMEGESREVGKVHAALARAVALKGQPFQKPC
VILSGGETTVTIKKQPDGTPKGRGGRAGEFCMGLALGLQGQAGVYALAADTDGIDGVEDNAGAFVAPDTLERALAKGMKL
NRYLDRNDAYGYFEPLGDLVITGPTNTNVNDFRAILVL
>Mature_437_residues
TAPNPASQPRQFLEHLYHAAVQRALPLHNTAAYLPKPPKGRTIVLGAGKAGGSMVQAVEALWPADAPLEGLVVTRYHHIP
PRPAGLKQRIELVEAAHPVPDAAGLAAAQRILAMTQGLTADDLVLCLISGGGSSLLTLPAEGLTLEDKQRINKDLLNSGA
NIGEMNCVRKHLSRIKGGRLAAACAPARVITLTISDVPGDDPSIIASGPTVPDASTCAEAVAILARYGIAIPGGLMSLLE
QGALETPKPGDAAFNGHEVHMIATPQQSLEAAAAVARDAGLTAYILSDEMEGESREVGKVHAALARAVALKGQPFQKPCV
ILSGGETTVTIKKQPDGTPKGRGGRAGEFCMGLALGLQGQAGVYALAADTDGIDGVEDNAGAFVAPDTLERALAKGMKLN
RYLDRNDAYGYFEPLGDLVITGPTNTNVNDFRAILVL

Specific function: Degrades an unidentified toxic product from the first step of tartrate degradation [H]

COG id: COG2379

COG function: function code G; Putative glycerate kinase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI31543063, Length=395, Percent_Identity=33.1645569620253, Blast_Score=170, Evalue=2e-42,
Organism=Caenorhabditis elegans, GI193205461, Length=422, Percent_Identity=27.0142180094787, Blast_Score=139, Evalue=3e-33,
Organism=Drosophila melanogaster, GI19920578, Length=435, Percent_Identity=29.1954022988506, Blast_Score=128, Evalue=1e-29,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007835 [H]

Pfam domain/function: PF05161 MOFRL [H]

EC number: =1.1.1.81 [H]

Molecular weight: Translated: 45538; Mature: 45407

Theoretical pI: Translated: 6.35; Mature: 6.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTAPNPASQPRQFLEHLYHAAVQRALPLHNTAAYLPKPPKGRTIVLGAGKAGGSMVQAVE
CCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEECCCCCCHHHHHHH
ALWPADAPLEGLVVTRYHHIPPRPAGLKQRIELVEAAHPVPDAAGLAAAQRILAMTQGLT
HHCCCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCC
ADDLVLCLISGGGSSLLTLPAEGLTLEDKQRINKDLLNSGANIGEMNCVRKHLSRIKGGR
CCCEEEEEEECCCCEEEEECCCCCEEHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCC
LAAACAPARVITLTISDVPGDDPSIIASGPTVPDASTCAEAVAILARYGIAIPGGLMSLL
EEEECCCCEEEEEEEECCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHH
EQGALETPKPGDAAFNGHEVHMIATPQQSLEAAAAVARDAGLTAYILSDEMEGESREVGK
HHCCCCCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHH
VHAALARAVALKGQPFQKPCVILSGGETTVTIKKQPDGTPKGRGGRAGEFCMGLALGLQG
HHHHHHHHHHHCCCCCCCCEEEEECCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHCCCC
QAGVYALAADTDGIDGVEDNAGAFVAPDTLERALAKGMKLNRYLDRNDAYGYFEPLGDLV
CCCEEEEEECCCCCCCCCCCCCCEECHHHHHHHHHCCCHHHHHHCCCCCCCHHCCCCCEE
ITGPTNTNVNDFRAILVL
EECCCCCCCCCEEEEEEC
>Mature Secondary Structure 
TAPNPASQPRQFLEHLYHAAVQRALPLHNTAAYLPKPPKGRTIVLGAGKAGGSMVQAVE
CCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEECCCCCCHHHHHHH
ALWPADAPLEGLVVTRYHHIPPRPAGLKQRIELVEAAHPVPDAAGLAAAQRILAMTQGLT
HHCCCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCC
ADDLVLCLISGGGSSLLTLPAEGLTLEDKQRINKDLLNSGANIGEMNCVRKHLSRIKGGR
CCCEEEEEEECCCCEEEEECCCCCEEHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCC
LAAACAPARVITLTISDVPGDDPSIIASGPTVPDASTCAEAVAILARYGIAIPGGLMSLL
EEEECCCCEEEEEEEECCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHH
EQGALETPKPGDAAFNGHEVHMIATPQQSLEAAAAVARDAGLTAYILSDEMEGESREVGK
HHCCCCCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHH
VHAALARAVALKGQPFQKPCVILSGGETTVTIKKQPDGTPKGRGGRAGEFCMGLALGLQG
HHHHHHHHHHHCCCCCCCCEEEEECCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHCCCC
QAGVYALAADTDGIDGVEDNAGAFVAPDTLERALAKGMKLNRYLDRNDAYGYFEPLGDLV
CCCEEEEEECCCCCCCCCCCCCCEECHHHHHHHHHCCCHHHHHHCCCCCCCHHCCCCCEE
ITGPTNTNVNDFRAILVL
EECCCCCCCCCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7592429 [H]