Definition | Polaromonas sp. JS666 chromosome, complete genome. |
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Accession | NC_007948 |
Length | 5,200,264 |
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The map label for this gene is 91787303
Identifier: 91787303
GI number: 91787303
Start: 1448670
End: 1449383
Strand: Direct
Name: 91787303
Synonym: Bpro_1408
Alternate gene names: NA
Gene position: 1448670-1449383 (Clockwise)
Preceding gene: 91787302
Following gene: 91787304
Centisome position: 27.86
GC content: 52.24
Gene sequence:
>714_bases ATGGCTTTCATCCAGTCAACGCAAGTCTCGACCGACGATCGGGACGTGGCTCATCAATGGTTATTCAAGAGCGAAACTTA TGACAACTGCAATTGCGCTGTGAATTGCGGTTGCCAATTCAACTTGCCGAGTACCCATGGATTTTGTCAGTCGGCCTTCG TCGGCACAATCGTTGAAGGCCATTTCAACGATACGCCGCTCGCGGGGCTGAATTGGGCGGCGCTGTACAAGTGGCCTGGC GAGATCAAGGACGGAAACGGAAAACGCCAGATCGTTATCGACGAAGGTGCGGATGAAGCTCAACGGGTAGCGCTTGAAAC AATTATCTCAGGTGGGGCATGCGAGCCGTTGAGCAATTTATTCTCCGTATTTGCGTCCACATGCTCTAAATTTTGCAGGA CATTGTTCCTGCCGATTCATCTCGAAGCGAACTTGGAACTCAGAACAGCAAGAGTTGATATACCGGGCGTCATGAAGAGC AGTGGCAGACCGATCATCAACGAGTTCAATGGTGAACCGTTCCATATTGCGCTGGCACGTCCGAGCGGCAGTTTTGAGTT CACCTACGCAGAGATCGGGCTGGGGACGACGTCGGTGACGGGTGATATGGAGATGGCGTTCGAAGATTCATGGGCCCATT TTTGTGTTCACCACTTCAATCAAGATGGGCTGGTCCGCGAAAGATCAAGGCTCACAGCATGGCTTGGCGCGTGA
Upstream 100 bases:
>100_bases CCAACTACGAGCGGCTCGCGGCAGTGAAGGCGACCTATGACCCGGGCAACCTCTTCCACATCAACCAGAACATCGCTCCG GCGAACGGGAGCTGAGCATC
Downstream 100 bases:
>100_bases CCTCCTGATCGGGTGAAAAGGGGATGACGGTGCCCGTTGACGCCACACTTGAGGCAGTGCTCAGGCGCGATCGCCTGGTC GTCGTTACCGCGCTTACTGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 237; Mature: 236
Protein sequence:
>237_residues MAFIQSTQVSTDDRDVAHQWLFKSETYDNCNCAVNCGCQFNLPSTHGFCQSAFVGTIVEGHFNDTPLAGLNWAALYKWPG EIKDGNGKRQIVIDEGADEAQRVALETIISGGACEPLSNLFSVFASTCSKFCRTLFLPIHLEANLELRTARVDIPGVMKS SGRPIINEFNGEPFHIALARPSGSFEFTYAEIGLGTTSVTGDMEMAFEDSWAHFCVHHFNQDGLVRERSRLTAWLGA
Sequences:
>Translated_237_residues MAFIQSTQVSTDDRDVAHQWLFKSETYDNCNCAVNCGCQFNLPSTHGFCQSAFVGTIVEGHFNDTPLAGLNWAALYKWPG EIKDGNGKRQIVIDEGADEAQRVALETIISGGACEPLSNLFSVFASTCSKFCRTLFLPIHLEANLELRTARVDIPGVMKS SGRPIINEFNGEPFHIALARPSGSFEFTYAEIGLGTTSVTGDMEMAFEDSWAHFCVHHFNQDGLVRERSRLTAWLGA >Mature_236_residues AFIQSTQVSTDDRDVAHQWLFKSETYDNCNCAVNCGCQFNLPSTHGFCQSAFVGTIVEGHFNDTPLAGLNWAALYKWPGE IKDGNGKRQIVIDEGADEAQRVALETIISGGACEPLSNLFSVFASTCSKFCRTLFLPIHLEANLELRTARVDIPGVMKSS GRPIINEFNGEPFHIALARPSGSFEFTYAEIGLGTTSVTGDMEMAFEDSWAHFCVHHFNQDGLVRERSRLTAWLGA
Specific function: Unknown
COG id: COG5588
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26121; Mature: 25989
Theoretical pI: Translated: 4.92; Mature: 4.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.8 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 3.8 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAFIQSTQVSTDDRDVAHQWLFKSETYDNCNCAVNCGCQFNLPSTHGFCQSAFVGTIVEG CCEECCCCCCCCCHHHHHHHHHCCCCCCCCCEEEECCEEECCCCCCCHHHHHHHHHEEEC HFNDTPLAGLNWAALYKWPGEIKDGNGKRQIVIDEGADEAQRVALETIISGGACEPLSNL CCCCCCCCCCCEEEEEECCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHCCCCCHHHHHH FSVFASTCSKFCRTLFLPIHLEANLELRTARVDIPGVMKSSGRPIINEFNGEPFHIALAR HHHHHHHHHHHHHHEEEEEEEECCEEEEEEEECCCCHHHCCCCCCHHHCCCCEEEEEEEC PSGSFEFTYAEIGLGTTSVTGDMEMAFEDSWAHFCVHHFNQDGLVRERSRLTAWLGA CCCCEEEEEEEECCCCEECCCCEEEEECCHHHHHHHHHCCCCCCHHHHHHHHHCCCC >Mature Secondary Structure AFIQSTQVSTDDRDVAHQWLFKSETYDNCNCAVNCGCQFNLPSTHGFCQSAFVGTIVEG CEECCCCCCCCCHHHHHHHHHCCCCCCCCCEEEECCEEECCCCCCCHHHHHHHHHEEEC HFNDTPLAGLNWAALYKWPGEIKDGNGKRQIVIDEGADEAQRVALETIISGGACEPLSNL CCCCCCCCCCCEEEEEECCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHCCCCCHHHHHH FSVFASTCSKFCRTLFLPIHLEANLELRTARVDIPGVMKSSGRPIINEFNGEPFHIALAR HHHHHHHHHHHHHHEEEEEEEECCEEEEEEEECCCCHHHCCCCCCHHHCCCCEEEEEEEC PSGSFEFTYAEIGLGTTSVTGDMEMAFEDSWAHFCVHHFNQDGLVRERSRLTAWLGA CCCCEEEEEEEECCCCEECCCCEEEEECCHHHHHHHHHCCCCCCHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA