Definition | Polaromonas sp. JS666 chromosome, complete genome. |
---|---|
Accession | NC_007948 |
Length | 5,200,264 |
Click here to switch to the map view.
The map label for this gene is 91787254
Identifier: 91787254
GI number: 91787254
Start: 1398214
End: 1399035
Strand: Direct
Name: 91787254
Synonym: Bpro_1359
Alternate gene names: NA
Gene position: 1398214-1399035 (Clockwise)
Preceding gene: 91787253
Following gene: 91787255
Centisome position: 26.89
GC content: 64.96
Gene sequence:
>822_bases ATGGCCCTCGGCAGAGAGTTCATGCAAATCGTGCGATCCATTCAAGTGCCCGGCTCCCAGGCCGCTGGTGGTGAGACGGC CCTGCCTCTGCCAGAGCCGGGCGAAGCCGCCAGCCGACGCTCGGATCTGCTTGATGGCATCAAGCAGGGCGTCTTGCTGG GCGCTGCGATTCTGGCGCTCACATTGCCACCGCTGCGTATGGGTACCCCTCACAGCCAGCCGGGGCCGCGCTATGCGGAC TTCGCCGGTGAAAGCGCATCCGCCGATGCGCAGCATGTCGCCAACTGGGTGGTCGACTCGGGCGACAACCAGCAACTTTT TTTCGTGATCTTGGACAAGAAAAATACCCGGGTGTTTGTGTTTGACCCTTCCGGCAAGCTGCGCGGCGCCACCCCGGTGC TGGTCGGCGCCGCGAAGGGCGACGACTCCGTCACCGGGATTGGCGGGCGGCCGATTGCGGAAGTGGCGCCGCACGAGCGC ACCACGCCAGCCGGCCGCTTCATGGCGGAACCTGGCCGCAACACCCTCGGCGAAGACGTGGTGTGGGTGGACTATGAGGC GGCCGTTTCCATGCACCGGGTACGCGCCCTGGAGCCCGCCGAGCGCCGGCTGGAACGCCTGGCGTCGCCCACCACCGATG ACAACCGCATTTCCTATGGCTGCATCAACATGCCGGTCGAGTTTTTTGAGAATGTGCTCAGGCCGGCCTTCAACGCCCGC TACGGCGTGGTCTACGTGTTGCCGGAGGTCAAGACCGTTGGCGAAGTGTTCACGTCGGCCTATGACCTGGTCGCCAGGTA TGGCCTGAAACCCGCAGGCTGA
Upstream 100 bases:
>100_bases GTGCGCGGGTGTGAGTTCTTCCCGGGCCGGCAGAACGCATTTCGCGTTGCCGGCCCGAGGTGCGTTCATCCGCGCTAAAG TTCGTTAAAGGTCTGTACAC
Downstream 100 bases:
>100_bases CCTCGGCCCGTGCCTTCCTCTTCCCCCCTTTCCGGCGAGCTGATCTGTAACAGCCTGCCCTGACTGGCCGGAGGGATTTC GCCTGATGAAAAGGAGGGCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 273; Mature: 272
Protein sequence:
>273_residues MALGREFMQIVRSIQVPGSQAAGGETALPLPEPGEAASRRSDLLDGIKQGVLLGAAILALTLPPLRMGTPHSQPGPRYAD FAGESASADAQHVANWVVDSGDNQQLFFVILDKKNTRVFVFDPSGKLRGATPVLVGAAKGDDSVTGIGGRPIAEVAPHER TTPAGRFMAEPGRNTLGEDVVWVDYEAAVSMHRVRALEPAERRLERLASPTTDDNRISYGCINMPVEFFENVLRPAFNAR YGVVYVLPEVKTVGEVFTSAYDLVARYGLKPAG
Sequences:
>Translated_273_residues MALGREFMQIVRSIQVPGSQAAGGETALPLPEPGEAASRRSDLLDGIKQGVLLGAAILALTLPPLRMGTPHSQPGPRYAD FAGESASADAQHVANWVVDSGDNQQLFFVILDKKNTRVFVFDPSGKLRGATPVLVGAAKGDDSVTGIGGRPIAEVAPHER TTPAGRFMAEPGRNTLGEDVVWVDYEAAVSMHRVRALEPAERRLERLASPTTDDNRISYGCINMPVEFFENVLRPAFNAR YGVVYVLPEVKTVGEVFTSAYDLVARYGLKPAG >Mature_272_residues ALGREFMQIVRSIQVPGSQAAGGETALPLPEPGEAASRRSDLLDGIKQGVLLGAAILALTLPPLRMGTPHSQPGPRYADF AGESASADAQHVANWVVDSGDNQQLFFVILDKKNTRVFVFDPSGKLRGATPVLVGAAKGDDSVTGIGGRPIAEVAPHERT TPAGRFMAEPGRNTLGEDVVWVDYEAAVSMHRVRALEPAERRLERLASPTTDDNRISYGCINMPVEFFENVLRPAFNARY GVVYVLPEVKTVGEVFTSAYDLVARYGLKPAG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29313; Mature: 29181
Theoretical pI: Translated: 5.74; Mature: 5.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALGREFMQIVRSIQVPGSQAAGGETALPLPEPGEAASRRSDLLDGIKQGVLLGAAILAL CCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH TLPPLRMGTPHSQPGPRYADFAGESASADAQHVANWVVDSGDNQQLFFVILDKKNTRVFV HCCCCCCCCCCCCCCCCHHHCCCCCCCCCHHHHHHHHHCCCCCCEEEEEEEECCCCEEEE FDPSGKLRGATPVLVGAAKGDDSVTGIGGRPIAEVAPHERTTPAGRFMAEPGRNTLGEDV ECCCCCCCCCCEEEEEECCCCCCEECCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCE VWVDYEAAVSMHRVRALEPAERRLERLASPTTDDNRISYGCINMPVEFFENVLRPAFNAR EEEEHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCEEEEEECCCHHHHHHHHHHHHCCC YGVVYVLPEVKTVGEVFTSAYDLVARYGLKPAG CCEEEEECCHHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure ALGREFMQIVRSIQVPGSQAAGGETALPLPEPGEAASRRSDLLDGIKQGVLLGAAILAL CCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH TLPPLRMGTPHSQPGPRYADFAGESASADAQHVANWVVDSGDNQQLFFVILDKKNTRVFV HCCCCCCCCCCCCCCCCHHHCCCCCCCCCHHHHHHHHHCCCCCCEEEEEEEECCCCEEEE FDPSGKLRGATPVLVGAAKGDDSVTGIGGRPIAEVAPHERTTPAGRFMAEPGRNTLGEDV ECCCCCCCCCCEEEEEECCCCCCEECCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCE VWVDYEAAVSMHRVRALEPAERRLERLASPTTDDNRISYGCINMPVEFFENVLRPAFNAR EEEEHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCEEEEEECCCHHHHHHHHHHHHCCC YGVVYVLPEVKTVGEVFTSAYDLVARYGLKPAG CCEEEEECCHHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA