Definition | Polaromonas sp. JS666 chromosome, complete genome. |
---|---|
Accession | NC_007948 |
Length | 5,200,264 |
Click here to switch to the map view.
The map label for this gene is 91787253
Identifier: 91787253
GI number: 91787253
Start: 1397108
End: 1397488
Strand: Direct
Name: 91787253
Synonym: Bpro_1358
Alternate gene names: NA
Gene position: 1397108-1397488 (Clockwise)
Preceding gene: 91787251
Following gene: 91787254
Centisome position: 26.87
GC content: 62.2
Gene sequence:
>381_bases ATGAATCAGTCAAAACCGGTCAGCGCGCAATTCAGGGCGCCGTTGCGCTCGCTGGCCCTAACCGTCGAAGAAACGGGCCC CGGAGATTTTCGCTGGCGTATTCTGGAAGGCTTCGGCAATCCTCCCGTGTTTGAATCCGTGAGTTGCGCCAACCGGACGT TTTCGGCCTACGATACGGCGTTGGCAACCGGCTATGGTGAGTTGCAGCGCCTGATTGGCCTTGAGCTTCAGCATGGTCCG CGCGCGGCACCCGACGCTGTCGTAGACTTCATCCGCCTGGCCTCCACGCCGCGTCCGAGGCCTGTTGAACGGGCCGATCC CGTGAAGTCCCCGCCCGTGAACGGTGGAAGCTTCACCCCGCGCATACGAAGACCCGCATGA
Upstream 100 bases:
>100_bases GTCCTTATTGACAGATCGGTTCCGCTGTGAATGTTGAGGAAAAAATTTCCAATAATTTTCAGGCGGATCGCCATCGGTTC GCCTGTACCTGGAACAAGCC
Downstream 100 bases:
>100_bases AACCCGACCTGAAGGCCGACTACACCCGCCTGCGGACCGAGCTGGAGGCCTTGATGGCCCAGCCTGTGAAAGACTTTGCG CGCATCGACCAGATCGTGCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 126; Mature: 126
Protein sequence:
>126_residues MNQSKPVSAQFRAPLRSLALTVEETGPGDFRWRILEGFGNPPVFESVSCANRTFSAYDTALATGYGELQRLIGLELQHGP RAAPDAVVDFIRLASTPRPRPVERADPVKSPPVNGGSFTPRIRRPA
Sequences:
>Translated_126_residues MNQSKPVSAQFRAPLRSLALTVEETGPGDFRWRILEGFGNPPVFESVSCANRTFSAYDTALATGYGELQRLIGLELQHGP RAAPDAVVDFIRLASTPRPRPVERADPVKSPPVNGGSFTPRIRRPA >Mature_126_residues MNQSKPVSAQFRAPLRSLALTVEETGPGDFRWRILEGFGNPPVFESVSCANRTFSAYDTALATGYGELQRLIGLELQHGP RAAPDAVVDFIRLASTPRPRPVERADPVKSPPVNGGSFTPRIRRPA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13743; Mature: 13743
Theoretical pI: Translated: 10.41; Mature: 10.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNQSKPVSAQFRAPLRSLALTVEETGPGDFRWRILEGFGNPPVFESVSCANRTFSAYDTA CCCCCCCCHHHHHHHHHHEEEECCCCCCCEEEEEECCCCCCCCCCCCHHCCCCHHHHHHH LATGYGELQRLIGLELQHGPRAAPDAVVDFIRLASTPRPRPVERADPVKSPPVNGGSFTP HHHCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC RIRRPA CCCCCC >Mature Secondary Structure MNQSKPVSAQFRAPLRSLALTVEETGPGDFRWRILEGFGNPPVFESVSCANRTFSAYDTA CCCCCCCCHHHHHHHHHHEEEECCCCCCCEEEEEECCCCCCCCCCCCHHCCCCHHHHHHH LATGYGELQRLIGLELQHGPRAAPDAVVDFIRLASTPRPRPVERADPVKSPPVNGGSFTP HHHCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC RIRRPA CCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA