Definition | Polaromonas sp. JS666 chromosome, complete genome. |
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Accession | NC_007948 |
Length | 5,200,264 |
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The map label for this gene is mutY [H]
Identifier: 91787195
GI number: 91787195
Start: 1342705
End: 1343778
Strand: Direct
Name: mutY [H]
Synonym: Bpro_1299
Alternate gene names: 91787195
Gene position: 1342705-1343778 (Clockwise)
Preceding gene: 91787194
Following gene: 91787199
Centisome position: 25.82
GC content: 64.53
Gene sequence:
>1074_bases GTGCCATCGACCCTGGTAGGGTTTTCCGGTGAAATCGTGCGCTGGCAGGCCACGCATGGGCGCAATAGCCTGCCCTGGCA AAACACGCGCGACCCCTACCGCGTGTGGCTGTCGGAGATCATGCTCCAGCAGACCCAGGTCGCGACCGTGCTCGACTACT ACGCCCGGTTTTTGCAGCATTTCCCCGCAGTCAGCGACCTGGCCGCTGCCTCGCAGGATGAGGTGCTGGCCTTGTGGAGC GGCCTGGGCTACTACAGCCGGGCGCGCAACCTGCACCGGTGCGCACAGGACGTCATGCTGCTGCATGCGGGGCAGTTTCC GCGTACCGCCGAACAGCTTCAGACCTTGCCAGGTATAGGCCGTTCGACCGCAGCTGCCATTGCGTCATTCTGTTTTGGAG AGCGCGTCGCGATTCTGGATGGCAACGTCAAACGGGTGCTCACGCGGGTGCTCGGTTTTTCGGCGGATCTTGCGCAAAGC GCCAATGAACGTGCGCTGTGGGATATGGCGACCAACTTGTTGCCCACACAGGATTTGCCGGACAGCATGCCGCGTTACAC GCAAGGGCTGATGGATCTGGGCGCCACGATTTGCGCTGGCCGGCAGCCGCAGTGCCTGCTGTGCCCGGTGCAGAATCTGT GCGGCGGCCGTGCGAGCGGTGAGCCCGAAAAATACCCCGTCAAGACGCGAACGCTCAAGCGCAGTTCGCGGGCGCTGAGC CTGCTATGGGCGCAGAGGCCGGACGGCTCGGTCTGGCTTGAAAAGCGCCCTGCGTCGGGCATCTGGGGCGGGCTGTATTG CCTGCCGGTTTTTGACAGCGAGGACGCGCTGAAGGATTTTTTGCCACCCAGCGTGCACGGCCGGCTGGAGCCTCTGCCGC ATTTTGTTCATGTGCTGACGCACAGGGATTTGCATCTGGCCCCGTGGATCGCGGGCTTCCGGGCGGGCCAGGCCATGCCG AAAGCGATGGATGCGGGGGCGCGTGCCGGTGCGTGGTTTGGCCCGGCGCAATGGCCGGGTTTGGGCTTGCCTGCGCCCAT CCGCAAACTGCTGCTGCAGGATGCACCGGCGTGA
Upstream 100 bases:
>100_bases GACCCGTGGTCCCTCACCGCTGATGAAGGCCGCAGGCGTTACGCGCAAAGGCCGGCCGACGAATCCGCCTGCTCGTGAGC CACGCGGGAATCCGGACGTT
Downstream 100 bases:
>100_bases GCGGGATTTTGGCGATGTACCGGACCGTTGCTGCCTGATCAGCCGGCATCCAGTTCGCGGTGCCGTTTCAGGGTGGGCCA CTGCCTGCCAAACGACTCGG
Product: A/G-specific DNA-adenine glycosylase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 357; Mature: 356
Protein sequence:
>357_residues MPSTLVGFSGEIVRWQATHGRNSLPWQNTRDPYRVWLSEIMLQQTQVATVLDYYARFLQHFPAVSDLAAASQDEVLALWS GLGYYSRARNLHRCAQDVMLLHAGQFPRTAEQLQTLPGIGRSTAAAIASFCFGERVAILDGNVKRVLTRVLGFSADLAQS ANERALWDMATNLLPTQDLPDSMPRYTQGLMDLGATICAGRQPQCLLCPVQNLCGGRASGEPEKYPVKTRTLKRSSRALS LLWAQRPDGSVWLEKRPASGIWGGLYCLPVFDSEDALKDFLPPSVHGRLEPLPHFVHVLTHRDLHLAPWIAGFRAGQAMP KAMDAGARAGAWFGPAQWPGLGLPAPIRKLLLQDAPA
Sequences:
>Translated_357_residues MPSTLVGFSGEIVRWQATHGRNSLPWQNTRDPYRVWLSEIMLQQTQVATVLDYYARFLQHFPAVSDLAAASQDEVLALWS GLGYYSRARNLHRCAQDVMLLHAGQFPRTAEQLQTLPGIGRSTAAAIASFCFGERVAILDGNVKRVLTRVLGFSADLAQS ANERALWDMATNLLPTQDLPDSMPRYTQGLMDLGATICAGRQPQCLLCPVQNLCGGRASGEPEKYPVKTRTLKRSSRALS LLWAQRPDGSVWLEKRPASGIWGGLYCLPVFDSEDALKDFLPPSVHGRLEPLPHFVHVLTHRDLHLAPWIAGFRAGQAMP KAMDAGARAGAWFGPAQWPGLGLPAPIRKLLLQDAPA >Mature_356_residues PSTLVGFSGEIVRWQATHGRNSLPWQNTRDPYRVWLSEIMLQQTQVATVLDYYARFLQHFPAVSDLAAASQDEVLALWSG LGYYSRARNLHRCAQDVMLLHAGQFPRTAEQLQTLPGIGRSTAAAIASFCFGERVAILDGNVKRVLTRVLGFSADLAQSA NERALWDMATNLLPTQDLPDSMPRYTQGLMDLGATICAGRQPQCLLCPVQNLCGGRASGEPEKYPVKTRTLKRSSRALSL LWAQRPDGSVWLEKRPASGIWGGLYCLPVFDSEDALKDFLPPSVHGRLEPLPHFVHVLTHRDLHLAPWIAGFRAGQAMPK AMDAGARAGAWFGPAQWPGLGLPAPIRKLLLQDAPA
Specific function: Adenine glycosylase active on G-A mispairs. MutY also corrects error-prone DNA synthesis past GO lesions which are due to the oxidatively damaged form of guanine:7,8-dihydro-8- oxoguanine (8-oxo-dGTP) [H]
COG id: COG1194
COG function: function code L; A/G-specific DNA glycosylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the Nth/MutY family [H]
Homologues:
Organism=Homo sapiens, GI115298648, Length=231, Percent_Identity=43.7229437229437, Blast_Score=183, Evalue=2e-46, Organism=Homo sapiens, GI6912520, Length=231, Percent_Identity=43.7229437229437, Blast_Score=183, Evalue=2e-46, Organism=Homo sapiens, GI190358497, Length=231, Percent_Identity=43.7229437229437, Blast_Score=183, Evalue=2e-46, Organism=Homo sapiens, GI115298654, Length=231, Percent_Identity=43.7229437229437, Blast_Score=183, Evalue=2e-46, Organism=Homo sapiens, GI115298652, Length=231, Percent_Identity=43.7229437229437, Blast_Score=183, Evalue=2e-46, Organism=Homo sapiens, GI115298650, Length=231, Percent_Identity=43.7229437229437, Blast_Score=183, Evalue=2e-46, Organism=Escherichia coli, GI1789331, Length=349, Percent_Identity=44.4126074498567, Blast_Score=283, Evalue=1e-77,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011257 - InterPro: IPR004036 - InterPro: IPR004035 - InterPro: IPR003651 - InterPro: IPR003265 - InterPro: IPR000445 - InterPro: IPR003583 - InterPro: IPR023170 - InterPro: IPR005760 - InterPro: IPR000086 - InterPro: IPR015797 [H]
Pfam domain/function: PF10576 EndIII_4Fe-2S; PF00633 HHH; PF00730 HhH-GPD [H]
EC number: 3.2.2.-
Molecular weight: Translated: 39297; Mature: 39165
Theoretical pI: Translated: 8.86; Mature: 8.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPSTLVGFSGEIVRWQATHGRNSLPWQNTRDPYRVWLSEIMLQQTQVATVLDYYARFLQH CCCCCCCCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FPAVSDLAAASQDEVLALWSGLGYYSRARNLHRCAQDVMLLHAGQFPRTAEQLQTLPGIG CCCHHHHHHCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCC RSTAAAIASFCFGERVAILDGNVKRVLTRVLGFSADLAQSANERALWDMATNLLPTQDLP HHHHHHHHHHHHCCEEEEECCCHHHHHHHHHCCCHHHHHCCCHHHHHHHHHHCCCCCCCC DSMPRYTQGLMDLGATICAGRQPQCLLCPVQNLCGGRASGEPEKYPVKTRTLKRSSRALS CHHHHHHHHHHHHHHHHHCCCCCCEEECCHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHH LLWAQRPDGSVWLEKRPASGIWGGLYCLPVFDSEDALKDFLPPSVHGRLEPLPHFVHVLT HHEEECCCCCEEEECCCCCCCCCCEEEEEEECCHHHHHHCCCCCCCCCCCHHHHHHHHHH HRDLHLAPWIAGFRAGQAMPKAMDAGARAGAWFGPAQWPGLGLPAPIRKLLLQDAPA CCCCCHHHHHHHHHHCCCCHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCC >Mature Secondary Structure PSTLVGFSGEIVRWQATHGRNSLPWQNTRDPYRVWLSEIMLQQTQVATVLDYYARFLQH CCCCCCCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FPAVSDLAAASQDEVLALWSGLGYYSRARNLHRCAQDVMLLHAGQFPRTAEQLQTLPGIG CCCHHHHHHCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCC RSTAAAIASFCFGERVAILDGNVKRVLTRVLGFSADLAQSANERALWDMATNLLPTQDLP HHHHHHHHHHHHCCEEEEECCCHHHHHHHHHCCCHHHHHCCCHHHHHHHHHHCCCCCCCC DSMPRYTQGLMDLGATICAGRQPQCLLCPVQNLCGGRASGEPEKYPVKTRTLKRSSRALS CHHHHHHHHHHHHHHHHHCCCCCCEEECCHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHH LLWAQRPDGSVWLEKRPASGIWGGLYCLPVFDSEDALKDFLPPSVHGRLEPLPHFVHVLT HHEEECCCCCEEEECCCCCCCCCCEEEEEEECCHHHHHHCCCCCCCCCCCHHHHHHHHHH HRDLHLAPWIAGFRAGQAMPKAMDAGARAGAWFGPAQWPGLGLPAPIRKLLLQDAPA CCCCCHHHHHHHHHHCCCCHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: 4Fe-4S Cluster [C]
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: Hydrolase; Glycosylases; Hydrolysing N-glycosyl compounds [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2197596; 2001994; 9278503; 9846876 [H]