Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

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The map label for this gene is 91787194

Identifier: 91787194

GI number: 91787194

Start: 1340627

End: 1342606

Strand: Direct

Name: 91787194

Synonym: Bpro_1298

Alternate gene names: NA

Gene position: 1340627-1342606 (Clockwise)

Preceding gene: 91787193

Following gene: 91787195

Centisome position: 25.78

GC content: 62.17

Gene sequence:

>1980_bases
ATGTCTTTTAACGAAAAATTTGACCAGCACGGCGCATGGCGACGCGGATTTGCCCTGCGGCTGAAGTTGCTTGCCGAGTG
GATGAAAGACCACGACCTGCTCGACGCGGCAGTGGAAGAGCGGCTGCACAGGCTGGAGTCGCAGGTGCGCTCCGACAAGG
TCATGGTGGCTTTTGTGGCGGAATTTTCGCGTGGCAAATCCGAGCTGATCAATGCCATCTTCTTTGCCGGCTATGGCCGC
CGCATCATGCCGGCGAGCGCTGGCCGCACTACCATGTGCCCGACCGAGCTGGGCTACGACGCCGATGTGCCACCCTGCCT
GCGCCTGTTGCCGATCGAGACGCGCCTGAAGTCCCAGGCGCTGATGGAATGGCGCATGGTGCCCGAAAAGTGGACGCGCG
TTGACCTGGACGTGAACGACCCGGCCCAGCTGGCGCAGGCCCTCGAGAAGGTCGCCGAGGTTCGGCATGTCACCCAGGAA
GAGGCCCGCTTGCTCGGATTCTGGAACGACAGCACGCCGGAAGACAACCCCCTGGTGGGCGCCGATGGCTTGATCGAAGT
GCCGAAGTGGCGTCATGCGCTGATCAACATCGCGCATCCGCTGCTCAAGCAGGGTCTGGTTATCCTCGATACGCCGGGCC
TGAATGCGATAGGCGCCGAGCCTGAGCTGACCGTCAGCCTGATCCCTCAGGCGCATGCGGTGGTGTTCATCCTCGCCGCT
GATACCGGTGTGACCAAATCCGACCTGTCCATCTGGCGCGAACACCTGATCACCGAGGGTGACGCCAGCGACGCGCGCCT
GGTGGTGCTGAACAAGATCGACACCATGTGGGATGCCTTGAGCACACCCGAGCAGGTGCAGGCGCAAATTGACCGGCAAA
GGGTGACATCGGCCGAAATCCTGGGGCTGCCCGAGTCGCAGGTCATTCCGGTTTCTGCGCAAAAAGGATTGCTTGCCAAG
GTGACGGGCGACAAGGCGCTTTTGCAGGCCAGCCGCTTGCCGGTGCTTGAGCTCGCATTGGCCCAGGGCGTGATGGGCCA
GCGCCAGAAGATCCTGCGCACGGCAGTGGCCGGCGGTATTGGCGAGCTGAGAATCGAGGCGGGGCGCGCCATGCACATTC
GCCGGCGTGACCTGGCCGAGCAGATGATCGAGCTGCGCGGCCTGAGAGGCAAGAACATCTCCGTGATCAAGCACATGCGC
ACGCGCATCGAGCAGGAGCAGGGCGAATTTGACACCAGCGGCGCCAAAATACATGCCGTGCGGTCCGTGCACCTCAAATT
GCTTCGGGAAATGTTTACCCTGCTCAGCACGCCAACGCTGAAGGCCGAGTTGGCCGAACTGACGGCGACGCTCAAGAAGT
CGGGTATCAAACTCGGCGTGAGGAAGGCTTACGGCCAGACCTTTTCCCGGCTGCGCGAGGGCCTGCAGAAGTGCCAAATT
CTCAGTGGCGAAATCCAGTCCATGCTGACCGCCTCTTTTCGGCAGTTGAATGCTGAATTCAGCTTCTCGCTGCAGGCGCC
CAAGGAGCCTGAGCTGGTCCGGTACGTCAACGACCTGGAACTGATACAGCGCAGCCACCTGCAATACCTGGGGGTGAGCA
ATATCCTGAAACTGTCGCAGGCCGAGTTTTCCGAGCGGCTGGTTCGGGCGCTGGCCACGCGCCTGCGGGTGGTGTACGAG
TCCGCCTTGGGCGAAGTGGAACTCTGGAACAAGTCAGCAGCATCACAGCTGGACGCGCAGCTGCGCGAGCGGCGCCGCAA
TTTCGGGCGCAGGCTCGAAGCGATCGAGCGTATCCAGCAGGCAGCATCCGGCCTGGACGAGCGCATTGCCGAGATTGAGG
ACCAGGAGAATGTCCTCAATGAGCTCGACACCAAGCTCAAAGAGCTGACCGAGCATCTGATGGGCGGGCCTGCAACCCAT
CCCAAGGCAGAAGAGCCGGCGGTCGCCATGGAACAGGCGGCGATGAGCCAGGCAGCCTGA

Upstream 100 bases:

>100_bases
TGCGTCAGTTGCCAGAAACCGTGAGCGTTCCAGAGCGGGCGCCCATGGTTGTTTCAGGTGGGCGATGCTATATTGACCAT
TCACACCCACACAGTTGACT

Downstream 100 bases:

>100_bases
CCCGTGGTCCCTCACCGCTGATGAAGGCCGCAGGCGTTACGCGCAAAGGCCGGCCGACGAATCCGCCTGCTCGTGAGCCA
CGCGGGAATCCGGACGTTGT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 659; Mature: 658

Protein sequence:

>659_residues
MSFNEKFDQHGAWRRGFALRLKLLAEWMKDHDLLDAAVEERLHRLESQVRSDKVMVAFVAEFSRGKSELINAIFFAGYGR
RIMPASAGRTTMCPTELGYDADVPPCLRLLPIETRLKSQALMEWRMVPEKWTRVDLDVNDPAQLAQALEKVAEVRHVTQE
EARLLGFWNDSTPEDNPLVGADGLIEVPKWRHALINIAHPLLKQGLVILDTPGLNAIGAEPELTVSLIPQAHAVVFILAA
DTGVTKSDLSIWREHLITEGDASDARLVVLNKIDTMWDALSTPEQVQAQIDRQRVTSAEILGLPESQVIPVSAQKGLLAK
VTGDKALLQASRLPVLELALAQGVMGQRQKILRTAVAGGIGELRIEAGRAMHIRRRDLAEQMIELRGLRGKNISVIKHMR
TRIEQEQGEFDTSGAKIHAVRSVHLKLLREMFTLLSTPTLKAELAELTATLKKSGIKLGVRKAYGQTFSRLREGLQKCQI
LSGEIQSMLTASFRQLNAEFSFSLQAPKEPELVRYVNDLELIQRSHLQYLGVSNILKLSQAEFSERLVRALATRLRVVYE
SALGEVELWNKSAASQLDAQLRERRRNFGRRLEAIERIQQAASGLDERIAEIEDQENVLNELDTKLKELTEHLMGGPATH
PKAEEPAVAMEQAAMSQAA

Sequences:

>Translated_659_residues
MSFNEKFDQHGAWRRGFALRLKLLAEWMKDHDLLDAAVEERLHRLESQVRSDKVMVAFVAEFSRGKSELINAIFFAGYGR
RIMPASAGRTTMCPTELGYDADVPPCLRLLPIETRLKSQALMEWRMVPEKWTRVDLDVNDPAQLAQALEKVAEVRHVTQE
EARLLGFWNDSTPEDNPLVGADGLIEVPKWRHALINIAHPLLKQGLVILDTPGLNAIGAEPELTVSLIPQAHAVVFILAA
DTGVTKSDLSIWREHLITEGDASDARLVVLNKIDTMWDALSTPEQVQAQIDRQRVTSAEILGLPESQVIPVSAQKGLLAK
VTGDKALLQASRLPVLELALAQGVMGQRQKILRTAVAGGIGELRIEAGRAMHIRRRDLAEQMIELRGLRGKNISVIKHMR
TRIEQEQGEFDTSGAKIHAVRSVHLKLLREMFTLLSTPTLKAELAELTATLKKSGIKLGVRKAYGQTFSRLREGLQKCQI
LSGEIQSMLTASFRQLNAEFSFSLQAPKEPELVRYVNDLELIQRSHLQYLGVSNILKLSQAEFSERLVRALATRLRVVYE
SALGEVELWNKSAASQLDAQLRERRRNFGRRLEAIERIQQAASGLDERIAEIEDQENVLNELDTKLKELTEHLMGGPATH
PKAEEPAVAMEQAAMSQAA
>Mature_658_residues
SFNEKFDQHGAWRRGFALRLKLLAEWMKDHDLLDAAVEERLHRLESQVRSDKVMVAFVAEFSRGKSELINAIFFAGYGRR
IMPASAGRTTMCPTELGYDADVPPCLRLLPIETRLKSQALMEWRMVPEKWTRVDLDVNDPAQLAQALEKVAEVRHVTQEE
ARLLGFWNDSTPEDNPLVGADGLIEVPKWRHALINIAHPLLKQGLVILDTPGLNAIGAEPELTVSLIPQAHAVVFILAAD
TGVTKSDLSIWREHLITEGDASDARLVVLNKIDTMWDALSTPEQVQAQIDRQRVTSAEILGLPESQVIPVSAQKGLLAKV
TGDKALLQASRLPVLELALAQGVMGQRQKILRTAVAGGIGELRIEAGRAMHIRRRDLAEQMIELRGLRGKNISVIKHMRT
RIEQEQGEFDTSGAKIHAVRSVHLKLLREMFTLLSTPTLKAELAELTATLKKSGIKLGVRKAYGQTFSRLREGLQKCQIL
SGEIQSMLTASFRQLNAEFSFSLQAPKEPELVRYVNDLELIQRSHLQYLGVSNILKLSQAEFSERLVRALATRLRVVYES
ALGEVELWNKSAASQLDAQLRERRRNFGRRLEAIERIQQAASGLDERIAEIEDQENVLNELDTKLKELTEHLMGGPATHP
KAEEPAVAMEQAAMSQAA

Specific function: Unknown

COG id: COG0699

COG function: function code R; Predicted GTPases (dynamin-related)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 73614; Mature: 73483

Theoretical pI: Translated: 7.09; Mature: 7.09

Prosite motif: PS00141 ASP_PROTEASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSFNEKFDQHGAWRRGFALRLKLLAEWMKDHDLLDAAVEERLHRLESQVRSDKVMVAFVA
CCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
EFSRGKSELINAIFFAGYGRRIMPASAGRTTMCPTELGYDADVPPCLRLLPIETRLKSQA
HHHCCHHHHHHHHHHHCCCCEECCCCCCCCCCCCHHCCCCCCCCHHHHHCCHHHHHHHHH
LMEWRMVPEKWTRVDLDVNDPAQLAQALEKVAEVRHVTQEEARLLGFWNDSTPEDNPLVG
HHHHHCCCCHHCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCEEC
ADGLIEVPKWRHALINIAHPLLKQGLVILDTPGLNAIGAEPELTVSLIPQAHAVVFILAA
CCCCEECCHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCEEEEECCCCCEEEEEEEC
DTGVTKSDLSIWREHLITEGDASDARLVVLNKIDTMWDALSTPEQVQAQIDRQRVTSAEI
CCCCCHHHHHHHHHHHCCCCCCCCCEEEEEHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
LGLPESQVIPVSAQKGLLAKVTGDKALLQASRLPVLELALAQGVMGQRQKILRTAVAGGI
CCCCCCCEEECCCCCCCEEEECCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCC
GELRIEAGRAMHIRRRDLAEQMIELRGLRGKNISVIKHMRTRIEQEQGEFDTSGAKIHAV
HHEEEECCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCEEHHH
RSVHLKLLREMFTLLSTPTLKAELAELTATLKKSGIKLGVRKAYGQTFSRLREGLQKCQI
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
LSGEIQSMLTASFRQLNAEFSFSLQAPKEPELVRYVNDLELIQRSHLQYLGVSNILKLSQ
HHHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHH
AEFSERLVRALATRLRVVYESALGEVELWNKSAASQLDAQLRERRRNFGRRLEAIERIQQ
HHHHHHHHHHHHHHHHHHHHHHCCCEEHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AASGLDERIAEIEDQENVLNELDTKLKELTEHLMGGPATHPKAEEPAVAMEQAAMSQAA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCC
>Mature Secondary Structure 
SFNEKFDQHGAWRRGFALRLKLLAEWMKDHDLLDAAVEERLHRLESQVRSDKVMVAFVA
CCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
EFSRGKSELINAIFFAGYGRRIMPASAGRTTMCPTELGYDADVPPCLRLLPIETRLKSQA
HHHCCHHHHHHHHHHHCCCCEECCCCCCCCCCCCHHCCCCCCCCHHHHHCCHHHHHHHHH
LMEWRMVPEKWTRVDLDVNDPAQLAQALEKVAEVRHVTQEEARLLGFWNDSTPEDNPLVG
HHHHHCCCCHHCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCEEC
ADGLIEVPKWRHALINIAHPLLKQGLVILDTPGLNAIGAEPELTVSLIPQAHAVVFILAA
CCCCEECCHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCEEEEECCCCCEEEEEEEC
DTGVTKSDLSIWREHLITEGDASDARLVVLNKIDTMWDALSTPEQVQAQIDRQRVTSAEI
CCCCCHHHHHHHHHHHCCCCCCCCCEEEEEHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
LGLPESQVIPVSAQKGLLAKVTGDKALLQASRLPVLELALAQGVMGQRQKILRTAVAGGI
CCCCCCCEEECCCCCCCEEEECCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCC
GELRIEAGRAMHIRRRDLAEQMIELRGLRGKNISVIKHMRTRIEQEQGEFDTSGAKIHAV
HHEEEECCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCEEHHH
RSVHLKLLREMFTLLSTPTLKAELAELTATLKKSGIKLGVRKAYGQTFSRLREGLQKCQI
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
LSGEIQSMLTASFRQLNAEFSFSLQAPKEPELVRYVNDLELIQRSHLQYLGVSNILKLSQ
HHHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHH
AEFSERLVRALATRLRVVYESALGEVELWNKSAASQLDAQLRERRRNFGRRLEAIERIQQ
HHHHHHHHHHHHHHHHHHHHHHCCCEEHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AASGLDERIAEIEDQENVLNELDTKLKELTEHLMGGPATHPKAEEPAVAMEQAAMSQAA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA