The gene/protein map for NC_007948 is currently unavailable.
Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

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The map label for this gene is ycjN [C]

Identifier: 91787155

GI number: 91787155

Start: 1302649

End: 1303977

Strand: Direct

Name: ycjN [C]

Synonym: Bpro_1258

Alternate gene names: 91787155

Gene position: 1302649-1303977 (Clockwise)

Preceding gene: 91787154

Following gene: 91787156

Centisome position: 25.05

GC content: 65.39

Gene sequence:

>1329_bases
ATGACAGAGTTCAACCGTCGCAAGTTCCTCGAAAGCTCGGCCGGCGTCGTCGCCGCCGCCACGGTCGGCACCGGGGCCGC
GGTGTTTGCGCCCGCGGTCCACGCGCAGGCGCTTGCGTTCAAGCCCGAGAAGGGCGCCAAGCTTCGCGTGCTGCGCTGGA
GCCGTTTCGTGCAGGGCGACATCGACGCCTACATGGCCAACGTCAAGAAGTTCACCGAGAAGACCGGCATCGAGGTGCGG
GTCGACAACGAAGGCTGGGAAGACGTGCGCCCGAAGGCCGCGGTGGCCGCGAACACCGGCGCCGGGCCCGACATCATCCT
GTCGACTAACGACGACGCCAACCTGTACCCCGAGAAGCTGCTCGACGTGACCGACCTGGCCACCTACCTGGGCAAGAAGT
ACGAGGGCTGGTATCCGGCGTGCGAGGCGTATTTGCGCCCCGATGGCAAGAAGTGGATCGGCATCGGCCTCGGTGCCGCC
GGCGCGATGCTGGTCTACCGCCAGAGCCACGTGAAGGCGGCCGGCTTCGACACCTTCCCGAAAGACACGGCCGGCTTCCT
GGCCCTGCTCAAGGGGCTGAAGGAGAAGGGCACGCCGGCCGGCATGGCGCTGGGCAACGCCACCGGCGACGGCCTGTGGA
CCAACTGGCTGATCTGGTCGCACGGCGGCAAGCTCGTCGACAAAGACAACAAGGTTGTGATCGACAGCCCCGAGACGATC
AAGGCGCTCGAGTACGGGAAGGAGATGTACGCGAACTTCGTTCCCGGCACCCTGTCGTGGCTCGATCCGAACAACAACAA
GGCCTTCCTCGACAGCCAGATCAGCCTGACCAACAACGGCATCTCGATCTACTACGCGACCAAGAACGCGACCGACCAGA
AGGTCAAGGACCTCAAGGAAGACGTTTACCACGCCCAGTACCCGGTCGGCCCGGTGGGGGTGCCGACCGAGTCGCACCTG
TTCTTCAACCAGATGATCATGAAGTACACCAAGTACCCGCAGGCCGCCAAGGAGTTCCTGCGCTTCATGATGGAGCAGGA
ACAGTTCGACCCATGGCTCACGGCGGCCGGCGGCTACATCGCCCCGCCGCTGGCGGCGTACGCGAAGTCGGCGATCTGGA
CCTCGGACCCGAAGCACACGCCGTACCGCGATTGCGTGAAGAACCTGCGCCCGGCAGGCTACGCCGGCAAGCTCGGCTAC
GCGTCGGCGGGTGCCGCCGCCGACTTCATCGTCGTCAATATGGTGGCCGAGGCGGCGAGCGGCTCGAAGACGCCGAAGGA
AGCGGCCGAGCGGGCGCAGAAGCGCGCCGAGCGTTACTACAAAGTCTGA

Upstream 100 bases:

>100_bases
ACCTGTTCGATGCGAGCACCGGCCAGCGCCTCGCGGCCTGACCGCGCTTGATGCCTTTTTCCCACCTCAATCCACGACTG
ATCACAGAAGGAGACAAGCC

Downstream 100 bases:

>100_bases
TGGTGCGCGACACCTTCGATGCGGCACCATCTCGCCGCGTTCGAACGTCACGCCGCCTGAACGGCGGGCGTGATGTTCAA
CTTGGCGCGGTTGCGCGGAC

Product: twin-arginine translocation pathway signal protein

Products: NA

Alternate protein names: Sugar ABC Transporter Periplasmic Protein; Sugar ABC Transporter

Number of amino acids: Translated: 442; Mature: 441

Protein sequence:

>442_residues
MTEFNRRKFLESSAGVVAAATVGTGAAVFAPAVHAQALAFKPEKGAKLRVLRWSRFVQGDIDAYMANVKKFTEKTGIEVR
VDNEGWEDVRPKAAVAANTGAGPDIILSTNDDANLYPEKLLDVTDLATYLGKKYEGWYPACEAYLRPDGKKWIGIGLGAA
GAMLVYRQSHVKAAGFDTFPKDTAGFLALLKGLKEKGTPAGMALGNATGDGLWTNWLIWSHGGKLVDKDNKVVIDSPETI
KALEYGKEMYANFVPGTLSWLDPNNNKAFLDSQISLTNNGISIYYATKNATDQKVKDLKEDVYHAQYPVGPVGVPTESHL
FFNQMIMKYTKYPQAAKEFLRFMMEQEQFDPWLTAAGGYIAPPLAAYAKSAIWTSDPKHTPYRDCVKNLRPAGYAGKLGY
ASAGAAADFIVVNMVAEAASGSKTPKEAAERAQKRAERYYKV

Sequences:

>Translated_442_residues
MTEFNRRKFLESSAGVVAAATVGTGAAVFAPAVHAQALAFKPEKGAKLRVLRWSRFVQGDIDAYMANVKKFTEKTGIEVR
VDNEGWEDVRPKAAVAANTGAGPDIILSTNDDANLYPEKLLDVTDLATYLGKKYEGWYPACEAYLRPDGKKWIGIGLGAA
GAMLVYRQSHVKAAGFDTFPKDTAGFLALLKGLKEKGTPAGMALGNATGDGLWTNWLIWSHGGKLVDKDNKVVIDSPETI
KALEYGKEMYANFVPGTLSWLDPNNNKAFLDSQISLTNNGISIYYATKNATDQKVKDLKEDVYHAQYPVGPVGVPTESHL
FFNQMIMKYTKYPQAAKEFLRFMMEQEQFDPWLTAAGGYIAPPLAAYAKSAIWTSDPKHTPYRDCVKNLRPAGYAGKLGY
ASAGAAADFIVVNMVAEAASGSKTPKEAAERAQKRAERYYKV
>Mature_441_residues
TEFNRRKFLESSAGVVAAATVGTGAAVFAPAVHAQALAFKPEKGAKLRVLRWSRFVQGDIDAYMANVKKFTEKTGIEVRV
DNEGWEDVRPKAAVAANTGAGPDIILSTNDDANLYPEKLLDVTDLATYLGKKYEGWYPACEAYLRPDGKKWIGIGLGAAG
AMLVYRQSHVKAAGFDTFPKDTAGFLALLKGLKEKGTPAGMALGNATGDGLWTNWLIWSHGGKLVDKDNKVVIDSPETIK
ALEYGKEMYANFVPGTLSWLDPNNNKAFLDSQISLTNNGISIYYATKNATDQKVKDLKEDVYHAQYPVGPVGVPTESHLF
FNQMIMKYTKYPQAAKEFLRFMMEQEQFDPWLTAAGGYIAPPLAAYAKSAIWTSDPKHTPYRDCVKNLRPAGYAGKLGYA
SAGAAADFIVVNMVAEAASGSKTPKEAAERAQKRAERYYKV

Specific function: Probably Part Of The Binding-Protein-Dependent Transport System Ycjnop. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Periplasmic (Potential) [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 48315; Mature: 48184

Theoretical pI: Translated: 9.21; Mature: 9.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTEFNRRKFLESSAGVVAAATVGTGAAVFAPAVHAQALAFKPEKGAKLRVLRWSRFVQGD
CCCCHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHEEECCCCCCEEEEEEHHHHHHHH
IDAYMANVKKFTEKTGIEVRVDNEGWEDVRPKAAVAANTGAGPDIILSTNDDANLYPEKL
HHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCEEEECCCCCCEEEEECCCCCCCCHHHH
LDVTDLATYLGKKYEGWYPACEAYLRPDGKKWIGIGLGAAGAMLVYRQSHVKAAGFDTFP
HHHHHHHHHHCCCCCCCCHHHHHHCCCCCCEEEEEECCCHHHEEEEHHHCCCCCCCCCCC
KDTAGFLALLKGLKEKGTPAGMALGNATGDGLWTNWLIWSHGGKLVDKDNKVVIDSPETI
CHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCEEEEEEECCCCEEEECCCEEEECCCHHH
KALEYGKEMYANFVPGTLSWLDPNNNKAFLDSQISLTNNGISIYYATKNATDQKVKDLKE
HHHHHHHHHHHHCCCCEEEEECCCCCCEEEECEEEEECCCEEEEEEECCCCHHHHHHHHH
DVYHAQYPVGPVGVPTESHLFFNQMIMKYTKYPQAAKEFLRFMMEQEQFDPWLTAAGGYI
HHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCHHCCCCCCC
APPLAAYAKSAIWTSDPKHTPYRDCVKNLRPAGYAGKLGYASAGAAADFIVVNMVAEAAS
CCCHHHHHHHHCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHC
GSKTPKEAAERAQKRAERYYKV
CCCCHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
TEFNRRKFLESSAGVVAAATVGTGAAVFAPAVHAQALAFKPEKGAKLRVLRWSRFVQGD
CCCHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHEEECCCCCCEEEEEEHHHHHHHH
IDAYMANVKKFTEKTGIEVRVDNEGWEDVRPKAAVAANTGAGPDIILSTNDDANLYPEKL
HHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCEEEECCCCCCEEEEECCCCCCCCHHHH
LDVTDLATYLGKKYEGWYPACEAYLRPDGKKWIGIGLGAAGAMLVYRQSHVKAAGFDTFP
HHHHHHHHHHCCCCCCCCHHHHHHCCCCCCEEEEEECCCHHHEEEEHHHCCCCCCCCCCC
KDTAGFLALLKGLKEKGTPAGMALGNATGDGLWTNWLIWSHGGKLVDKDNKVVIDSPETI
CHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCEEEEEEECCCCEEEECCCEEEECCCHHH
KALEYGKEMYANFVPGTLSWLDPNNNKAFLDSQISLTNNGISIYYATKNATDQKVKDLKE
HHHHHHHHHHHHCCCCEEEEECCCCCCEEEECEEEEECCCEEEEEEECCCCHHHHHHHHH
DVYHAQYPVGPVGVPTESHLFFNQMIMKYTKYPQAAKEFLRFMMEQEQFDPWLTAAGGYI
HHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCHHCCCCCCC
APPLAAYAKSAIWTSDPKHTPYRDCVKNLRPAGYAGKLGYASAGAAADFIVVNMVAEAAS
CCCHHHHHHHHCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHC
GSKTPKEAAERAQKRAERYYKV
CCCCHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA