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The map label for this gene is ycjO [C]

Identifier: 91787156

GI number: 91787156

Start: 1304111

End: 1305013

Strand: Direct

Name: ycjO [C]

Synonym: Bpro_1259

Alternate gene names: 91787156

Gene position: 1304111-1305013 (Clockwise)

Preceding gene: 91787155

Following gene: 91787157

Centisome position: 25.08

GC content: 63.9

Gene sequence:

>903_bases
ATGCTTGAGAGGTTGCAGAACAGCCGCAACGCGCTCGGGCTGATCTTCATGTTGCCGGCGGCGGTGTTGCTGCTGCTGTT
CCTGACCTATCCGCTCGGGCTGGGCGTGTGGCTGGGCTTCACCGACGCCAAGGTCGGCCGGCCGGGCGAGTGGATCGGCA
TCGAGAACTACGTGTTCCTCGCCACCGACAGCGTCACCCAGCTGGCGCTGTTCAACACGCTGTTCTACACAACCATTGCG
AGCGTCGCAAAGTTCTTCCTCGGCCTGTGGCTGGCGCTGCTGTTGAACAAGAACATCCGCTTCAAGTCCTTCTTCCGTGC
GGTGATCCTGCTGCCCTACATCGTGCCGACGGCCTTGTCGGCGATCGCCTTCTGGTGGCTGTTCGACGCCCAGTTCTCGA
TCATCAGCTGGGTGCTGGTGAAGCTGGGTGTCATCGACACCTACATCGATTTCCTCGGCAGCCCGTGGAACGCTCGCTTC
TCGGTGATCGCGGCCAACGTGTGGCGCGGCGTACCCTTCGTCGCGATCACCTTGCTCGCCGGCTTGCAGACCATCTCGCC
GTCGTACTACGAAGCCTCGGCGATCGACGGTGCCACCCCCTGGCAACAGTTCCGCCACGTCACCTTGCCGCTGCTCACGC
CGATCATCGCGGTGGTGATGACCTTCTCGGTGCTGTTCACCTTCACCGACTTCCAGCTGATCTACGTGATCACGCGCGGC
GGCCCGCTCAACGCCACCCACCTGATGGCCACGCTGTCGTTCCAGCGCGCGATCTCGGGCGGCGCGCTTGGCGAGGGCGC
GGCGATCTCGATCGCGATGGTGCCGTTCCTGCTGGCCGCCATCATGTTCAGCTACTTCGGCCTGCAGCGCCGCGCGTGGC
AACAGGGCGGGGCCGACAAATGA

Upstream 100 bases:

>100_bases
GCCGCGTTCGAACGTCACGCCGCCTGAACGGCGGGCGTGATGTTCAACTTGGCGCGGTTGCGCGGACGCGCAACCGATCG
CCTTCGTCGGGTGGTTCGTG

Downstream 100 bases:

>100_bases
GCCAGGACAAGAGCACCGACACGGTCGGGATGAGCTTTCTCGACTCCACCCCGCGCAAGCTGTTCCGGGTCTACCTGCCG
CTGTGCATCTTTCTGTTCGT

Product: binding-protein-dependent transport systems inner membrane component

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 300; Mature: 300

Protein sequence:

>300_residues
MLERLQNSRNALGLIFMLPAAVLLLLFLTYPLGLGVWLGFTDAKVGRPGEWIGIENYVFLATDSVTQLALFNTLFYTTIA
SVAKFFLGLWLALLLNKNIRFKSFFRAVILLPYIVPTALSAIAFWWLFDAQFSIISWVLVKLGVIDTYIDFLGSPWNARF
SVIAANVWRGVPFVAITLLAGLQTISPSYYEASAIDGATPWQQFRHVTLPLLTPIIAVVMTFSVLFTFTDFQLIYVITRG
GPLNATHLMATLSFQRAISGGALGEGAAISIAMVPFLLAAIMFSYFGLQRRAWQQGGADK

Sequences:

>Translated_300_residues
MLERLQNSRNALGLIFMLPAAVLLLLFLTYPLGLGVWLGFTDAKVGRPGEWIGIENYVFLATDSVTQLALFNTLFYTTIA
SVAKFFLGLWLALLLNKNIRFKSFFRAVILLPYIVPTALSAIAFWWLFDAQFSIISWVLVKLGVIDTYIDFLGSPWNARF
SVIAANVWRGVPFVAITLLAGLQTISPSYYEASAIDGATPWQQFRHVTLPLLTPIIAVVMTFSVLFTFTDFQLIYVITRG
GPLNATHLMATLSFQRAISGGALGEGAAISIAMVPFLLAAIMFSYFGLQRRAWQQGGADK
>Mature_300_residues
MLERLQNSRNALGLIFMLPAAVLLLLFLTYPLGLGVWLGFTDAKVGRPGEWIGIENYVFLATDSVTQLALFNTLFYTTIA
SVAKFFLGLWLALLLNKNIRFKSFFRAVILLPYIVPTALSAIAFWWLFDAQFSIISWVLVKLGVIDTYIDFLGSPWNARF
SVIAANVWRGVPFVAITLLAGLQTISPSYYEASAIDGATPWQQFRHVTLPLLTPIIAVVMTFSVLFTFTDFQLIYVITRG
GPLNATHLMATLSFQRAISGGALGEGAAISIAMVPFLLAAIMFSYFGLQRRAWQQGGADK

Specific function: Probably part of an ABC transporter complex. Probably responsible for the translocation of the substrate across the membrane (Probable) [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787570, Length=234, Percent_Identity=29.4871794871795, Blast_Score=110, Evalue=9e-26,
Organism=Escherichia coli, GI1790465, Length=241, Percent_Identity=33.6099585062241, Blast_Score=104, Evalue=7e-24,
Organism=Escherichia coli, GI1789861, Length=277, Percent_Identity=27.4368231046931, Blast_Score=100, Evalue=2e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 33210; Mature: 33210

Theoretical pI: Translated: 9.88; Mature: 9.88

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLERLQNSRNALGLIFMLPAAVLLLLFLTYPLGLGVWLGFTDAKVGRPGEWIGIENYVFL
CCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEECCCCEEEE
ATDSVTQLALFNTLFYTTIASVAKFFLGLWLALLLNKNIRFKSFFRAVILLPYIVPTALS
EECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
AIAFWWLFDAQFSIISWVLVKLGVIDTYIDFLGSPWNARFSVIAANVWRGVPFVAITLLA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHEEHHHHCCCHHHHHHHHH
GLQTISPSYYEASAIDGATPWQQFRHVTLPLLTPIIAVVMTFSVLFTFTDFQLIYVITRG
HHHHCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEEEECC
GPLNATHLMATLSFQRAISGGALGEGAAISIAMVPFLLAAIMFSYFGLQRRAWQQGGADK
CCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MLERLQNSRNALGLIFMLPAAVLLLLFLTYPLGLGVWLGFTDAKVGRPGEWIGIENYVFL
CCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEECCCCEEEE
ATDSVTQLALFNTLFYTTIASVAKFFLGLWLALLLNKNIRFKSFFRAVILLPYIVPTALS
EECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
AIAFWWLFDAQFSIISWVLVKLGVIDTYIDFLGSPWNARFSVIAANVWRGVPFVAITLLA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHEEHHHHCCCHHHHHHHHH
GLQTISPSYYEASAIDGATPWQQFRHVTLPLLTPIIAVVMTFSVLFTFTDFQLIYVITRG
HHHHCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEEEECC
GPLNATHLMATLSFQRAISGGALGEGAAISIAMVPFLLAAIMFSYFGLQRRAWQQGGADK
CCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA