The gene/protein map for NC_007948 is currently unavailable.
Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

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The map label for this gene is ctaA [H]

Identifier: 91787150

GI number: 91787150

Start: 1297304

End: 1298455

Strand: Direct

Name: ctaA [H]

Synonym: Bpro_1253

Alternate gene names: 91787150

Gene position: 1297304-1298455 (Clockwise)

Preceding gene: 91787149

Following gene: 91787151

Centisome position: 24.95

GC content: 65.8

Gene sequence:

>1152_bases
ATGAGCACGCAAGACCTCTATAACCTGAGCCCCGCGCTGCGCCTGATGATCATGGGCCTGGTGGTCGCGCTCGGCCCGCT
GGCCTGGGTCTGGCTGCACCACAAACAGGCGCCGGTTTCGCGGCGCCTGCGCGTGCTGACCCTGGTCACGTTGTTCCTGA
CCTTTGACCTGGTGATTTTTGGTGCCTTCACCCGCCTGACAGATTCCGGCCTGGGCTGCCCAGACTGGCCGGGTTGCTAC
GGCAGTGCCAGCCCGGTGGGCGCGCAAATGCATATCGAGGCCGCGCAGAGCGCCATGCCCACGGGCCCGGTCACCCATAC
CAAGGCCTGGATCGAAATGATTCACCGCTATCTGGCCACCGGTGTGGGCGTGCTGATCCTCACGCTTGCCATCGTCAGCT
GGCTGGAACGCGAGCGGGCGCATATCTCGCCAGCGTGGCCCACGGTGACATTGCTGTGGGTGTGCCTGCAAGGCGCGTTC
GGCGCGCTCACCGTCACGATGAAACTGTTTCCGGCCATCGTCACACTGCACCTGCTCGGCGGCCTGATTTTGCTGGGGCT
GCTGCGCGCGCAGTCGGTGCGTTATGCGCAGGCGCAAGGGGCTTCCCCGATCGTCGAGCTGAGCGCGGGTACCCGGCTTT
TTGTTTTCGCCGCGTTCGCTCTGCTGTGGCTGCAGATCGCCCTGGGGGGCTGGGTCAGCACCAACTACGCGGTGCTTGCC
TGCACGGACTTCCCGAGCTGCCAGAACTCGCTGTGGCCCGCGATGGATTTCAGCCAGGGATTCACGCTCTGGCGCGAACT
GGGCGCCGGCCATGACGGCGCCAATATCAGCTTTCAGGCACTCACCGCCATCCATTACGCGCACCGTCTGGCCGCCTATG
CGGTGTTTGCCGTGCTGATGCTGCTGGCCGCCAGGCTTTACCGCGTGCCAGCCCTGCGTCCTGATGCGTGCTGGCTGGGC
GGCCTCACCCTGCTGCAGGCGGCCACGGGCCTGAGCAACGTCGTGCTGGGCTGGCCGCTGGTGGCCGCGGTGGCGCACAC
CGGCGGCGCCGCAGCGCTGGTGGTGGTGCTCACCGGCATCGTTTTTTCCAGCCGCAGCATCCCCAGCGCAGTCCATGCGT
CAAAATGGAAAGCTTCGAGATTGTCCGCATGA

Upstream 100 bases:

>100_bases
AGACCCCTGTGGTGACTGCTATGGTCTGGCGAAGCCGGTTCCGCGGCCCCTGCTGGTTTGGGATTCCAATGCGCATGGCA
ATGGCTGGCGCTCTTTAGAC

Downstream 100 bases:

>100_bases
ACCCCAGCAACCCTGCCGCTTCGGCCCCCCATTCCCGCGCACCGTCCAGGTTCGCCCAGTTCTACGCGCTGACCAAGCCG
CGCGTGGTGCAGCTCATTGT

Product: cytochrome oxidase assembly

Products: NA

Alternate protein names: HAS; Cytochrome aa3-controlling protein [H]

Number of amino acids: Translated: 383; Mature: 382

Protein sequence:

>383_residues
MSTQDLYNLSPALRLMIMGLVVALGPLAWVWLHHKQAPVSRRLRVLTLVTLFLTFDLVIFGAFTRLTDSGLGCPDWPGCY
GSASPVGAQMHIEAAQSAMPTGPVTHTKAWIEMIHRYLATGVGVLILTLAIVSWLERERAHISPAWPTVTLLWVCLQGAF
GALTVTMKLFPAIVTLHLLGGLILLGLLRAQSVRYAQAQGASPIVELSAGTRLFVFAAFALLWLQIALGGWVSTNYAVLA
CTDFPSCQNSLWPAMDFSQGFTLWRELGAGHDGANISFQALTAIHYAHRLAAYAVFAVLMLLAARLYRVPALRPDACWLG
GLTLLQAATGLSNVVLGWPLVAAVAHTGGAAALVVVLTGIVFSSRSIPSAVHASKWKASRLSA

Sequences:

>Translated_383_residues
MSTQDLYNLSPALRLMIMGLVVALGPLAWVWLHHKQAPVSRRLRVLTLVTLFLTFDLVIFGAFTRLTDSGLGCPDWPGCY
GSASPVGAQMHIEAAQSAMPTGPVTHTKAWIEMIHRYLATGVGVLILTLAIVSWLERERAHISPAWPTVTLLWVCLQGAF
GALTVTMKLFPAIVTLHLLGGLILLGLLRAQSVRYAQAQGASPIVELSAGTRLFVFAAFALLWLQIALGGWVSTNYAVLA
CTDFPSCQNSLWPAMDFSQGFTLWRELGAGHDGANISFQALTAIHYAHRLAAYAVFAVLMLLAARLYRVPALRPDACWLG
GLTLLQAATGLSNVVLGWPLVAAVAHTGGAAALVVVLTGIVFSSRSIPSAVHASKWKASRLSA
>Mature_382_residues
STQDLYNLSPALRLMIMGLVVALGPLAWVWLHHKQAPVSRRLRVLTLVTLFLTFDLVIFGAFTRLTDSGLGCPDWPGCYG
SASPVGAQMHIEAAQSAMPTGPVTHTKAWIEMIHRYLATGVGVLILTLAIVSWLERERAHISPAWPTVTLLWVCLQGAFG
ALTVTMKLFPAIVTLHLLGGLILLGLLRAQSVRYAQAQGASPIVELSAGTRLFVFAAFALLWLQIALGGWVSTNYAVLAC
TDFPSCQNSLWPAMDFSQGFTLWRELGAGHDGANISFQALTAIHYAHRLAAYAVFAVLMLLAARLYRVPALRPDACWLGG
LTLLQAATGLSNVVLGWPLVAAVAHTGGAAALVVVLTGIVFSSRSIPSAVHASKWKASRLSA

Specific function: Catalyzes the oxidation of the C8 methyl side group on heme O porphyrin ring into a formyl group. Also involved in the sporulation [H]

COG id: COG1612

COG function: function code O; Uncharacterized protein required for cytochrome oxidase assembly

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the COX15/CtaA family. Type 1 subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003780 [H]

Pfam domain/function: PF02628 COX15-CtaA [H]

EC number: NA

Molecular weight: Translated: 41083; Mature: 40952

Theoretical pI: Translated: 9.66; Mature: 9.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTQDLYNLSPALRLMIMGLVVALGPLAWVWLHHKQAPVSRRLRVLTLVTLFLTFDLVIF
CCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH
GAFTRLTDSGLGCPDWPGCYGSASPVGAQMHIEAAQSAMPTGPVTHTKAWIEMIHRYLAT
HHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEHHHHHHCCCCCCCHHHHHHHHHHHHHHHH
GVGVLILTLAIVSWLERERAHISPAWPTVTLLWVCLQGAFGALTVTMKLFPAIVTLHLLG
HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
GLILLGLLRAQSVRYAQAQGASPIVELSAGTRLFVFAAFALLWLQIALGGWVSTNYAVLA
HHHHHHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEE
CTDFPSCQNSLWPAMDFSQGFTLWRELGAGHDGANISFQALTAIHYAHRLAAYAVFAVLM
ECCCCCHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
LLAARLYRVPALRPDACWLGGLTLLQAATGLSNVVLGWPLVAAVAHTGGAAALVVVLTGI
HHHHHHHHCCCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
VFSSRSIPSAVHASKWKASRLSA
HHCCCCCCHHHHHHHHHHHHCCC
>Mature Secondary Structure 
STQDLYNLSPALRLMIMGLVVALGPLAWVWLHHKQAPVSRRLRVLTLVTLFLTFDLVIF
CCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH
GAFTRLTDSGLGCPDWPGCYGSASPVGAQMHIEAAQSAMPTGPVTHTKAWIEMIHRYLAT
HHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEHHHHHHCCCCCCCHHHHHHHHHHHHHHHH
GVGVLILTLAIVSWLERERAHISPAWPTVTLLWVCLQGAFGALTVTMKLFPAIVTLHLLG
HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
GLILLGLLRAQSVRYAQAQGASPIVELSAGTRLFVFAAFALLWLQIALGGWVSTNYAVLA
HHHHHHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEE
CTDFPSCQNSLWPAMDFSQGFTLWRELGAGHDGANISFQALTAIHYAHRLAAYAVFAVLM
ECCCCCHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
LLAARLYRVPALRPDACWLGGLTLLQAATGLSNVVLGWPLVAAVAHTGGAAALVVVLTGI
HHHHHHHHCCCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
VFSSRSIPSAVHASKWKASRLSA
HHCCCCCCHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7678007 [H]