Definition | Polaromonas sp. JS666 chromosome, complete genome. |
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Accession | NC_007948 |
Length | 5,200,264 |
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The map label for this gene is 91787149
Identifier: 91787149
GI number: 91787149
Start: 1296469
End: 1297101
Strand: Direct
Name: 91787149
Synonym: Bpro_1252
Alternate gene names: NA
Gene position: 1296469-1297101 (Clockwise)
Preceding gene: 91787148
Following gene: 91787150
Centisome position: 24.93
GC content: 66.82
Gene sequence:
>633_bases ATGCCGATGCTGGACGCCTCGCATGCACGCGCCCCCGGTACCGTTGCCGGCCGCTGGAAAATGCTGGCGGTGCTGCTGGT GTGCGCTGCGCCGGTCATCGCGTCTTATTTCACGTACTACGTGATCCGGCCTGAAGGTCGCCGCAATTTTGGCGAACTGA TCGATCCGCAGCGGCCGCTGCCGGCTCTTGCCACGCAGGCCCTGGATGGACAGAAGGGCGAACTGCCGGCCCTGAAGGAC CAGTGGCTGCTGATCACCGTCGCGGGCGGGGCCTGCGATGCGCGCTGCGAGAGCAACCTGTATTTCCAGCGGCAGCTGCG TGAATCGCTGGGCAAGGAAAAAGAGCGGCTGGACCGCGTCTGGCTGGTCAATGACGAGGTGGCCGTGCGTGAGGCGCTGC GGCCAGCGCTGGCCGCATCCACCGTGCTGCGTGTGGCACCGGCGGAGCTGGCGAAGTGGCTGGAACCGGCCGCCGGCCAG CGCTTGCAGGACCACCTTTACCTCGTTGATCCGCTGGGCAACTGGATGATGCGCTTTCCCGCCGGCATGGACGCCGAAGC TGCTGCCAAGGCCAAGCGCGACCTGGAACGCCTGCTGCGCGCCTCCAGCAGCTGGGACAAGGAAGGCCGTTGA
Upstream 100 bases:
>100_bases CCTGACAAACGCCGTGACAAACGACAAAACCGAATTTTCTTCACCGCATGCCGGTGCGTCTGCGGCGCAAGACCAGCCGC TCGGCCTGACGGTGCACGCC
Downstream 100 bases:
>100_bases GTATGGCCCCCACGCTCGCCCACTGCGTGTGGCTCTCTGCCCCCCGAGGGGGCGCTGCGCCTGCGGTCTGGCGGAGCCAG TCCCGCGGCCCCGGCTTGCG
Product: hypothetical protein
Products: NA
Alternate protein names: Sco1/SenC Family Cytochrome Oxidase Assembly Protein
Number of amino acids: Translated: 210; Mature: 209
Protein sequence:
>210_residues MPMLDASHARAPGTVAGRWKMLAVLLVCAAPVIASYFTYYVIRPEGRRNFGELIDPQRPLPALATQALDGQKGELPALKD QWLLITVAGGACDARCESNLYFQRQLRESLGKEKERLDRVWLVNDEVAVREALRPALAASTVLRVAPAELAKWLEPAAGQ RLQDHLYLVDPLGNWMMRFPAGMDAEAAAKAKRDLERLLRASSSWDKEGR
Sequences:
>Translated_210_residues MPMLDASHARAPGTVAGRWKMLAVLLVCAAPVIASYFTYYVIRPEGRRNFGELIDPQRPLPALATQALDGQKGELPALKD QWLLITVAGGACDARCESNLYFQRQLRESLGKEKERLDRVWLVNDEVAVREALRPALAASTVLRVAPAELAKWLEPAAGQ RLQDHLYLVDPLGNWMMRFPAGMDAEAAAKAKRDLERLLRASSSWDKEGR >Mature_209_residues PMLDASHARAPGTVAGRWKMLAVLLVCAAPVIASYFTYYVIRPEGRRNFGELIDPQRPLPALATQALDGQKGELPALKDQ WLLITVAGGACDARCESNLYFQRQLRESLGKEKERLDRVWLVNDEVAVREALRPALAASTVLRVAPAELAKWLEPAAGQR LQDHLYLVDPLGNWMMRFPAGMDAEAAAKAKRDLERLLRASSSWDKEGR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23362; Mature: 23231
Theoretical pI: Translated: 8.82; Mature: 8.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPMLDASHARAPGTVAGRWKMLAVLLVCAAPVIASYFTYYVIRPEGRRNFGELIDPQRPL CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCHHHHCCCCCCC PALATQALDGQKGELPALKDQWLLITVAGGACDARCESNLYFQRQLRESLGKEKERLDRV HHHHHHHCCCCCCCCCCCCCCEEEEEEECCCCCCHHHCCHHHHHHHHHHHCHHHHHHHHE WLVNDEVAVREALRPALAASTVLRVAPAELAKWLEPAAGQRLQDHLYLVDPLGNWMMRFP EEECCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHCHHCCCHHHHCEEEECCHHHHHHHCC AGMDAEAAAKAKRDLERLLRASSSWDKEGR CCCCHHHHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure PMLDASHARAPGTVAGRWKMLAVLLVCAAPVIASYFTYYVIRPEGRRNFGELIDPQRPL CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCHHHHCCCCCCC PALATQALDGQKGELPALKDQWLLITVAGGACDARCESNLYFQRQLRESLGKEKERLDRV HHHHHHHCCCCCCCCCCCCCCEEEEEEECCCCCCHHHCCHHHHHHHHHHHCHHHHHHHHE WLVNDEVAVREALRPALAASTVLRVAPAELAKWLEPAAGQRLQDHLYLVDPLGNWMMRFP EEECCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHCHHCCCHHHHCEEEECCHHHHHHHCC AGMDAEAAAKAKRDLERLLRASSSWDKEGR CCCCHHHHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA