The gene/protein map for NC_007948 is currently unavailable.
Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

Click here to switch to the map view.

The map label for this gene is phbC [H]

Identifier: 91787099

GI number: 91787099

Start: 1243659

End: 1245413

Strand: Direct

Name: phbC [H]

Synonym: Bpro_1202

Alternate gene names: 91787099

Gene position: 1243659-1245413 (Clockwise)

Preceding gene: 91787095

Following gene: 91787102

Centisome position: 23.92

GC content: 66.72

Gene sequence:

>1755_bases
ATGGCGCTTTCCAATCCGCGTCCCGAGGGGCAGCACGCACTGCCTCCCATGGACGTTCCCCTCAAGCTCTGGCTGGCCCG
GCAGGCACACGGCATCTCGCCGGCGTCGCTTACCCTGGCCTATACCGACTGGCTCAGCCACCTGCTGGTTTCTCCGTCGA
AGCAGGCCGAGCTGGGCGCCAGCGCCCTGCGCAAGTGGCTGCTGTGGCTGCAGTACGCGCCGCAGCCCTGGCAACAGGAT
CGCCCCGTGAGCGTGGAGTCCCCGTCGCAGGACAAGCGCTTTTCGCGGCCCGAGTGGCAGGCGCCGCCGTTCAACGTTCT
GGCGCAGGCCTTTTTGCAGCAGCAGCAGTGGTGGGCCGAGGCCATGACTGGCGTTCGGGGTGTGTCCCGGCACCATGAGG
AGGTGGCAGCCTTCATCACCCGCCAGTGGCTGGACATGCTGTCGCCTTCCAATTTCATCGCCACCAATCCCCAGGTCCTG
AAGGAGACGCTGGCCAATGGCGGCGTCAACCTTGCCACCGGGCTGGCCAACTGGTCGCGCGATGCGGTCGCCGTCCTCAC
CGATGGCAAGCCGCGCGGCGTCGAGGCCTTCGCGCCCGGACAGGGCGTGGCGCTGACGCCGGGCAAGGTGGTGTTCAGAA
ACCACCTGATCGAGCTGATCCAGTACGAGCCCGTCACGGCCGAGGTGGACACCGAGCCCGTGCTCATTGTCCCGTCATGG
ATCATGAAGTACTACATCCTCGACCTGACGCCCGACGATTCGCTGGTCAAATACATGGTGGCGCAGGGGCACACCGTCTT
CATGATTTCATGGCGGAACCCCGACAGCGGTGATCGGGACCTTGGCATGGATGACTACCTGGAGCTGGGGGTGATGGCGG
CCCTGCAGGCTGTGCGCTCAGTGCGGCCACGTGCGCGTATCCACGCGATGGGCTACTGCCTGGGCGGAACACTGCTGGCC
ATCGCGGCAGCGGCCCTGGCCGGCAGCAGCCCCAACCTGCTGAAGACGGTGACGCTGCTGGCGGCGCAGGCCGATTTCCA
CGAGCCTGGCGAGCTGGGGCTGTTCATCGACGAGAGCCAGATCGCGTTTGTCGAAGACCTGATGGCCGAGTGGGGTTACC
TCGACGAGCGGCAGATGGCGGGTGCCTTCGCGCTGATCAACTCCAAGGACCTGGTCTGGTCCAAGCTGGTCCATGAATAC
CTGATGGGGGCGCACACGCCCATGACGGCGCTGCGGGCCTGGAATGCCGATGCAACGCGCCTGCCCGCCCGCATGCACAG
CGAGTACCTGCGCAGCCTGTACCTGCACAACGACCTGGCCGCGGGCCGCTACCGCGCTGCCGGCCAGGTGGTGAGGCTGT
CCCACATCGAGCTGCCGCTCTTTGTGGTCGCGACCGAGAGCGACCATGTCTCGCCCTGGCACTCGGTGTACAAGATTCAC
CGCCTGACCTCCAGCCCGGTCAGCTTTGTGCTGAGTTCCGGTGGCCACAACGTGGGCATCGTCAATCCACCCGCAGGGCC
TGCCGCCCATCCGCAGGCCAGCTACCGCATCGCCTCCCATGCGCCGGGCAAGGCGCCTGCCCATCCCGGGGACTGGCTCG
ACACGGCGGCGCGGCGTGAGGGGTCATGGTGGCCGGGCTGGCATGACTGGCTGAACAAGCACTCATCGGGCAAGGTCAAA
CCACCCCGCGTCAACGCGGTTATGTTCGAGGGCGCTCCGCTGGCAGCGCCCGGCCGCTACGTGCACCTCGACTGA

Upstream 100 bases:

>100_bases
AATACGGTGCAGGTGGAATGATGTGCAATATGTGCAATATGTGCAACATGTGCATGCGGCTGTAGCATGTGGTGACCATC
GCCACCGAAAGGGGGTTTTC

Downstream 100 bases:

>100_bases
CAGGCGCGACCGCCCGGGAGAGCGGTCGGAGGCCGCGGGGCGGCAGCTTAATGCGTCGTCGGCCGGCTTCCCGCGCCATC
CAGGGAGGCGGAAAGACTGG

Product: poly-beta-hydroxybutyrate polymerase-like protein

Products: NA

Alternate protein names: PHA synthase; PHB synthase; Poly(3-hydroxyalkanoate) polymerase; PHA polymerase; Poly(3-hydroxybutyrate) polymerase; PHB polymerase; Polyhydroxyalkanoic acid synthase [H]

Number of amino acids: Translated: 584; Mature: 583

Protein sequence:

>584_residues
MALSNPRPEGQHALPPMDVPLKLWLARQAHGISPASLTLAYTDWLSHLLVSPSKQAELGASALRKWLLWLQYAPQPWQQD
RPVSVESPSQDKRFSRPEWQAPPFNVLAQAFLQQQQWWAEAMTGVRGVSRHHEEVAAFITRQWLDMLSPSNFIATNPQVL
KETLANGGVNLATGLANWSRDAVAVLTDGKPRGVEAFAPGQGVALTPGKVVFRNHLIELIQYEPVTAEVDTEPVLIVPSW
IMKYYILDLTPDDSLVKYMVAQGHTVFMISWRNPDSGDRDLGMDDYLELGVMAALQAVRSVRPRARIHAMGYCLGGTLLA
IAAAALAGSSPNLLKTVTLLAAQADFHEPGELGLFIDESQIAFVEDLMAEWGYLDERQMAGAFALINSKDLVWSKLVHEY
LMGAHTPMTALRAWNADATRLPARMHSEYLRSLYLHNDLAAGRYRAAGQVVRLSHIELPLFVVATESDHVSPWHSVYKIH
RLTSSPVSFVLSSGGHNVGIVNPPAGPAAHPQASYRIASHAPGKAPAHPGDWLDTAARREGSWWPGWHDWLNKHSSGKVK
PPRVNAVMFEGAPLAAPGRYVHLD

Sequences:

>Translated_584_residues
MALSNPRPEGQHALPPMDVPLKLWLARQAHGISPASLTLAYTDWLSHLLVSPSKQAELGASALRKWLLWLQYAPQPWQQD
RPVSVESPSQDKRFSRPEWQAPPFNVLAQAFLQQQQWWAEAMTGVRGVSRHHEEVAAFITRQWLDMLSPSNFIATNPQVL
KETLANGGVNLATGLANWSRDAVAVLTDGKPRGVEAFAPGQGVALTPGKVVFRNHLIELIQYEPVTAEVDTEPVLIVPSW
IMKYYILDLTPDDSLVKYMVAQGHTVFMISWRNPDSGDRDLGMDDYLELGVMAALQAVRSVRPRARIHAMGYCLGGTLLA
IAAAALAGSSPNLLKTVTLLAAQADFHEPGELGLFIDESQIAFVEDLMAEWGYLDERQMAGAFALINSKDLVWSKLVHEY
LMGAHTPMTALRAWNADATRLPARMHSEYLRSLYLHNDLAAGRYRAAGQVVRLSHIELPLFVVATESDHVSPWHSVYKIH
RLTSSPVSFVLSSGGHNVGIVNPPAGPAAHPQASYRIASHAPGKAPAHPGDWLDTAARREGSWWPGWHDWLNKHSSGKVK
PPRVNAVMFEGAPLAAPGRYVHLD
>Mature_583_residues
ALSNPRPEGQHALPPMDVPLKLWLARQAHGISPASLTLAYTDWLSHLLVSPSKQAELGASALRKWLLWLQYAPQPWQQDR
PVSVESPSQDKRFSRPEWQAPPFNVLAQAFLQQQQWWAEAMTGVRGVSRHHEEVAAFITRQWLDMLSPSNFIATNPQVLK
ETLANGGVNLATGLANWSRDAVAVLTDGKPRGVEAFAPGQGVALTPGKVVFRNHLIELIQYEPVTAEVDTEPVLIVPSWI
MKYYILDLTPDDSLVKYMVAQGHTVFMISWRNPDSGDRDLGMDDYLELGVMAALQAVRSVRPRARIHAMGYCLGGTLLAI
AAAALAGSSPNLLKTVTLLAAQADFHEPGELGLFIDESQIAFVEDLMAEWGYLDERQMAGAFALINSKDLVWSKLVHEYL
MGAHTPMTALRAWNADATRLPARMHSEYLRSLYLHNDLAAGRYRAAGQVVRLSHIELPLFVVATESDHVSPWHSVYKIHR
LTSSPVSFVLSSGGHNVGIVNPPAGPAAHPQASYRIASHAPGKAPAHPGDWLDTAARREGSWWPGWHDWLNKHSSGKVKP
PRVNAVMFEGAPLAAPGRYVHLD

Specific function: Polymerizes d(-)-3-hydroxybutyryl-CoA to create PHB which consists of thousands of hydroxybutyrate molecules linked end to end. PHB serves as an intracellular energy reserve material when cells grow under conditions of nutrient limitation [H]

COG id: COG3243

COG function: function code I; Poly(3-hydroxyalkanoate) synthetase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the PHA/PHB synthase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000073
- InterPro:   IPR010963
- InterPro:   IPR010941 [H]

Pfam domain/function: PF00561 Abhydrolase_1; PF07167 PhaC_N [H]

EC number: NA

Molecular weight: Translated: 64418; Mature: 64287

Theoretical pI: Translated: 7.08; Mature: 7.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALSNPRPEGQHALPPMDVPLKLWLARQAHGISPASLTLAYTDWLSHLLVSPSKQAELGA
CCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCHHEEEHHHHHHHHHHCCCCHHHHHHH
SALRKWLLWLQYAPQPWQQDRPVSVESPSQDKRFSRPEWQAPPFNVLAQAFLQQQQWWAE
HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
AMTGVRGVSRHHEEVAAFITRQWLDMLSPSNFIATNPQVLKETLANGGVNLATGLANWSR
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCHHHHHHHHHCCCCEEHHHHCCCCC
DAVAVLTDGKPRGVEAFAPGQGVALTPGKVVFRNHLIELIQYEPVTAEVDTEPVLIVPSW
CEEEEEECCCCCCEEEECCCCCEEECCCHHHHHHHHHHHHHCCCCEEECCCCCEEEECHH
IMKYYILDLTPDDSLVKYMVAQGHTVFMISWRNPDSGDRDLGMDDYLELGVMAALQAVRS
HHEEEEEEECCCHHHHHHHHHCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHH
VRPRARIHAMGYCLGGTLLAIAAAALAGSSPNLLKTVTLLAAQADFHEPGELGLFIDESQ
CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCEEEEECCCH
IAFVEDLMAEWGYLDERQMAGAFALINSKDLVWSKLVHEYLMGAHTPMTALRAWNADATR
HHHHHHHHHHCCCCCHHHHCCEEEEECCCHHHHHHHHHHHHHCCCCCHHHHHHCCCCHHH
LPARMHSEYLRSLYLHNDLAAGRYRAAGQVVRLSHIELPLFVVATESDHVSPWHSVYKIH
CCHHHHHHHHHHHHHHCCCCCCHHHHCCCEEEEEEECCEEEEEEECCCCCCHHHHHHHHH
RLTSSPVSFVLSSGGHNVGIVNPPAGPAAHPQASYRIASHAPGKAPAHPGDWLDTAARRE
HHCCCCHHHHHHCCCCEEEEECCCCCCCCCCCCCEEEECCCCCCCCCCCCHHHHHHHHCC
GSWWPGWHDWLNKHSSGKVKPPRVNAVMFEGAPLAAPGRYVHLD
CCCCCCHHHHHCCCCCCCCCCCCCCEEEECCCCCCCCCCEEECC
>Mature Secondary Structure 
ALSNPRPEGQHALPPMDVPLKLWLARQAHGISPASLTLAYTDWLSHLLVSPSKQAELGA
CCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCHHEEEHHHHHHHHHHCCCCHHHHHHH
SALRKWLLWLQYAPQPWQQDRPVSVESPSQDKRFSRPEWQAPPFNVLAQAFLQQQQWWAE
HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
AMTGVRGVSRHHEEVAAFITRQWLDMLSPSNFIATNPQVLKETLANGGVNLATGLANWSR
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCHHHHHHHHHCCCCEEHHHHCCCCC
DAVAVLTDGKPRGVEAFAPGQGVALTPGKVVFRNHLIELIQYEPVTAEVDTEPVLIVPSW
CEEEEEECCCCCCEEEECCCCCEEECCCHHHHHHHHHHHHHCCCCEEECCCCCEEEECHH
IMKYYILDLTPDDSLVKYMVAQGHTVFMISWRNPDSGDRDLGMDDYLELGVMAALQAVRS
HHEEEEEEECCCHHHHHHHHHCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHH
VRPRARIHAMGYCLGGTLLAIAAAALAGSSPNLLKTVTLLAAQADFHEPGELGLFIDESQ
CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCEEEEECCCH
IAFVEDLMAEWGYLDERQMAGAFALINSKDLVWSKLVHEYLMGAHTPMTALRAWNADATR
HHHHHHHHHHCCCCCHHHHCCEEEEECCCHHHHHHHHHHHHHCCCCCHHHHHHCCCCHHH
LPARMHSEYLRSLYLHNDLAAGRYRAAGQVVRLSHIELPLFVVATESDHVSPWHSVYKIH
CCHHHHHHHHHHHHHHCCCCCCHHHHCCCEEEEEEECCEEEEEEECCCCCCHHHHHHHHH
RLTSSPVSFVLSSGGHNVGIVNPPAGPAAHPQASYRIASHAPGKAPAHPGDWLDTAARRE
HHCCCCHHHHHHCCCCEEEEECCCCCCCCCCCCCEEEECCCCCCCCCCCCHHHHHHHHCC
GSWWPGWHDWLNKHSSGKVKPPRVNAVMFEGAPLAAPGRYVHLD
CCCCCCHHHHHCCCCCCCCCCCCCCEEEECCCCCCCCCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9748438 [H]