Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

Click here to switch to the map view.

The map label for this gene is yfiQ [H]

Identifier: 91787102

GI number: 91787102

Start: 1246506

End: 1249217

Strand: Direct

Name: yfiQ [H]

Synonym: Bpro_1205

Alternate gene names: 91787102

Gene position: 1246506-1249217 (Clockwise)

Preceding gene: 91787099

Following gene: 91787103

Centisome position: 23.97

GC content: 70.69

Gene sequence:

>2712_bases
ATGAGCGTACGTCATCTTGAAGCCCTGTTCCAACCTGCGTCGGTGGCCGTGATTGGCGCCTCCGACCGCGAGGGCAGCCT
GGGGTCGGTGGTGCTGCGCAATCTCAAGCTCGGCGGCTTCAAGGGGCCGGTCTGGCCGGTCAACCACCGGCATGCGAGCG
TGGATGGCGGCCCGGCCTGGCCCGATGTCGAGTCGCTGCCGCAGGCGCCCGACCTGGCCGTGGTCTGCACGCCGGCGCAC
ACGGTGCCGGCATTGATCGCCGACCTGGGCCGCAAGGGTACGCGCGCTGCCATCGTGCTCACCGCAGGGCTGAAGCAGCC
GGCCGCAGAGGGTGGCTCCGCCGGTGGGCTCTCAGGTGGCCTCTCGCTGGAGCAAGCCATGCTGGACGCTGCGCGGCCAC
ACCTGCTGCGCATCCTGGGGCCCAACTGCATTGGCGCGCTGGTGCCGGGTGTCGGCCTGAATGCCAGCTTTGCGCCCGGC
AATGCCCAGCCGGGCCGGCTCGCATTTGTGACCCAGTCCGGCGCGCTGGCCACCGCCATGCTGGACTGGGCCAACAGCCG
CGGCGTCGGTTTTTCGCATTTCATCTCGCTGGGCGACAGCGCCGATGTGGATTTTGGCGACGTGATCGACTACCTGGCCA
GCGACGGCGGGACCCGGGCCATCCTGATGTACGCGGAATCCATCAAGGCGGCGCGAAAGTTCATGTCGGCCGCGCGTGCG
GCCTCGCGCAACAAGCCGGTGATCGTGGTCAAGGCCGGGCGCGCACCCGATGGTGCCCGGGCGGCCGCCTCGCACACCGG
AGCCCTCGCCGGCTCCGATGCCGTGTTCGACGCCGCCATCCGGCGGGCCGGCATGTTGCGGGTCGACACGCTGGAGTCGC
TCTTCGATGCCGCCGAAACGCTGGCCCATGCGCGGCCCTGGCGCGGCGAGCGGCTGGCCATTCTCACCAACGGCGGCGGT
GCCGGGGTGCTGGCAGCCGATGCGCTGCAGCTGGGGGGCGGCAGCCTGGCGCCACTGGATGAGCCGACGCTGGCCGCTCT
TGATCAATGCCTGCCCGGAACCTGGTCGCACGGCAACCCCATCGACATCATTGGCGATGCCCCGGTCAGCCGTTACCAGG
ACGCCTTGCGCGTACTGCTGGCTGCGCCGGACGTCGATGCCGTGCTGTTCATGCATGCGCCGACGGCCATTGTTGCGTCC
AGCGAGATCGCGCTGGCCTGCCTGCCGATGATGCAGGCTTCGGCCAAGCCGGTACTGACCTGCTGGCTGGGCGGTGCCGC
CGTGGCGGCTGCGCGCCAGTCCTCCGCGGGGGCGGGCATCGCCTCCTACAGCACGCCTGAACGCGCCGCCGACGCATGGC
TGCAGCTGCTCGGCCATGCGCGAAACCAGCAAGCCCTGCAACAGCTCCCGGCCGCCACGCTGGACGACTTCACGCCGGAC
CGGGCGCAAGCCGGTTTGCTGCTTGAACAGGCGCTGCATGAGGGCCGCGAGTGGCTCGACGGGGCGCCGGCCCAGGCGCT
GCTGCGGGCCTACGGCATCCCCGGCGTTGAAGCCGTGCAGGCCCGCGACGTGGAGGAGGCGGTTGCCGCCGCCAGCCGGA
TCGGCTACCCGGTGGTCCTGAAGATTGTGTCGCCGCAGGTCATCCACAAATCCGATGTCGGTGGTGTGGTGCTGGGTCTG
GCTTCCGCCGAAGCCGTCAGGGCCGCGGCCGTGAAGATGTCCGGGCAGGTGACGCGCCTGCTGCCGCAGGCGGTGGTGCT
GGGCTTCACCGTGCAGGCCATGGTGCAACGCCCCGGCGCCCATGAGCTGATCGTGGGCATCGCCACCGACGCCGTGTTTG
GTCCGGTCCTGCTGCTGGGCGAGGGCGGTACGGCCGTCGAGCTGCGCAAGGACCATGCGGTGGCCCTGCCGCCGCTCAAC
ACCAGCCTGGCCCGTGACCTGGTCACGCGGAGCCGGCTGGCGCCGCTGCTGGCCGGTTATCGCGGCCGTCCGGCGGCGGA
CGAGCAGGCGCTGCTGACCACCCTGCTGCGGGTGTCGCAGATGGCCTGCGACCTGCCCTGGCTGGCGGAACTCGACATCA
ACCCGCTGCTGGTCGATGAGCGCGGCGTGCTGGCGCTGGATGCGCGGGTCAGGCTGCGGCCGGTGCCGGCGGGCGAGGGC
AGCCGGCTTGCCATCCGCCCCTATCCGTCGGCTCTCGAGGAGCGCGTCCAGTTGGCGGGGGGCGAGCTGCTGCTGCGCCC
GATCCGTCCCGAAGACGGCCAACGCCTGATGGCCTTTTATGCCGGCGCATCGCCCGCCGACATGCGCCTGCGATTTTTCA
TGGCGCGGCGCGAGGTGCCGCATTCCGAACTGGCGCGCTACAGCCAGATCGACTACGACCGCGAGATGACTTTCATCGCG
CTGGCGCCCCAGGCGTCCGGTGATCGCGTCGGTGATCAAGCGATGGTGGCGGAAGCGCGGGCCGTGTGCGACCCGGACAA
CCTGCGGGCGGAGTTCGCCATCCAGGTGACGTCCGGCTGGCAGGGCAAGGGCCTGGGCCGCCTGCTGCTGGACAAGCTGA
CCGCCTACCTGCGCGAGCGCGGCACGACCGAAGTCGTGGGGCAGTGCCTGCTGGAGAACACCGGCATGGCCGCGCTGGCA
CGGCAGGCTGGCTTCGAGGTCTCAACCGATCCGTCCCGGGACACCATGACGATGCGCCTGCCGCTGCGCTGA

Upstream 100 bases:

>100_bases
GCCAGCGCCGCAATCGTTGATCTAGAGCAAATGCGGACGCTGCCCGGGCGCTAATCTGGTCTGGTCAGACGGGATGGCCC
GCCTGCGTGCAAGGAATCCC

Downstream 100 bases:

>100_bases
AACCTTTTCAACTCAGGAGCCACCATGTCCACCTACCATCAAATCCTCGTGCCGGTCGACGGCAGCCCCACCTCGCAAAA
GGCACTCGATGAAGCCATCA

Product: CoA-binding

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 903; Mature: 902

Protein sequence:

>903_residues
MSVRHLEALFQPASVAVIGASDREGSLGSVVLRNLKLGGFKGPVWPVNHRHASVDGGPAWPDVESLPQAPDLAVVCTPAH
TVPALIADLGRKGTRAAIVLTAGLKQPAAEGGSAGGLSGGLSLEQAMLDAARPHLLRILGPNCIGALVPGVGLNASFAPG
NAQPGRLAFVTQSGALATAMLDWANSRGVGFSHFISLGDSADVDFGDVIDYLASDGGTRAILMYAESIKAARKFMSAARA
ASRNKPVIVVKAGRAPDGARAAASHTGALAGSDAVFDAAIRRAGMLRVDTLESLFDAAETLAHARPWRGERLAILTNGGG
AGVLAADALQLGGGSLAPLDEPTLAALDQCLPGTWSHGNPIDIIGDAPVSRYQDALRVLLAAPDVDAVLFMHAPTAIVAS
SEIALACLPMMQASAKPVLTCWLGGAAVAAARQSSAGAGIASYSTPERAADAWLQLLGHARNQQALQQLPAATLDDFTPD
RAQAGLLLEQALHEGREWLDGAPAQALLRAYGIPGVEAVQARDVEEAVAAASRIGYPVVLKIVSPQVIHKSDVGGVVLGL
ASAEAVRAAAVKMSGQVTRLLPQAVVLGFTVQAMVQRPGAHELIVGIATDAVFGPVLLLGEGGTAVELRKDHAVALPPLN
TSLARDLVTRSRLAPLLAGYRGRPAADEQALLTTLLRVSQMACDLPWLAELDINPLLVDERGVLALDARVRLRPVPAGEG
SRLAIRPYPSALEERVQLAGGELLLRPIRPEDGQRLMAFYAGASPADMRLRFFMARREVPHSELARYSQIDYDREMTFIA
LAPQASGDRVGDQAMVAEARAVCDPDNLRAEFAIQVTSGWQGKGLGRLLLDKLTAYLRERGTTEVVGQCLLENTGMAALA
RQAGFEVSTDPSRDTMTMRLPLR

Sequences:

>Translated_903_residues
MSVRHLEALFQPASVAVIGASDREGSLGSVVLRNLKLGGFKGPVWPVNHRHASVDGGPAWPDVESLPQAPDLAVVCTPAH
TVPALIADLGRKGTRAAIVLTAGLKQPAAEGGSAGGLSGGLSLEQAMLDAARPHLLRILGPNCIGALVPGVGLNASFAPG
NAQPGRLAFVTQSGALATAMLDWANSRGVGFSHFISLGDSADVDFGDVIDYLASDGGTRAILMYAESIKAARKFMSAARA
ASRNKPVIVVKAGRAPDGARAAASHTGALAGSDAVFDAAIRRAGMLRVDTLESLFDAAETLAHARPWRGERLAILTNGGG
AGVLAADALQLGGGSLAPLDEPTLAALDQCLPGTWSHGNPIDIIGDAPVSRYQDALRVLLAAPDVDAVLFMHAPTAIVAS
SEIALACLPMMQASAKPVLTCWLGGAAVAAARQSSAGAGIASYSTPERAADAWLQLLGHARNQQALQQLPAATLDDFTPD
RAQAGLLLEQALHEGREWLDGAPAQALLRAYGIPGVEAVQARDVEEAVAAASRIGYPVVLKIVSPQVIHKSDVGGVVLGL
ASAEAVRAAAVKMSGQVTRLLPQAVVLGFTVQAMVQRPGAHELIVGIATDAVFGPVLLLGEGGTAVELRKDHAVALPPLN
TSLARDLVTRSRLAPLLAGYRGRPAADEQALLTTLLRVSQMACDLPWLAELDINPLLVDERGVLALDARVRLRPVPAGEG
SRLAIRPYPSALEERVQLAGGELLLRPIRPEDGQRLMAFYAGASPADMRLRFFMARREVPHSELARYSQIDYDREMTFIA
LAPQASGDRVGDQAMVAEARAVCDPDNLRAEFAIQVTSGWQGKGLGRLLLDKLTAYLRERGTTEVVGQCLLENTGMAALA
RQAGFEVSTDPSRDTMTMRLPLR
>Mature_902_residues
SVRHLEALFQPASVAVIGASDREGSLGSVVLRNLKLGGFKGPVWPVNHRHASVDGGPAWPDVESLPQAPDLAVVCTPAHT
VPALIADLGRKGTRAAIVLTAGLKQPAAEGGSAGGLSGGLSLEQAMLDAARPHLLRILGPNCIGALVPGVGLNASFAPGN
AQPGRLAFVTQSGALATAMLDWANSRGVGFSHFISLGDSADVDFGDVIDYLASDGGTRAILMYAESIKAARKFMSAARAA
SRNKPVIVVKAGRAPDGARAAASHTGALAGSDAVFDAAIRRAGMLRVDTLESLFDAAETLAHARPWRGERLAILTNGGGA
GVLAADALQLGGGSLAPLDEPTLAALDQCLPGTWSHGNPIDIIGDAPVSRYQDALRVLLAAPDVDAVLFMHAPTAIVASS
EIALACLPMMQASAKPVLTCWLGGAAVAAARQSSAGAGIASYSTPERAADAWLQLLGHARNQQALQQLPAATLDDFTPDR
AQAGLLLEQALHEGREWLDGAPAQALLRAYGIPGVEAVQARDVEEAVAAASRIGYPVVLKIVSPQVIHKSDVGGVVLGLA
SAEAVRAAAVKMSGQVTRLLPQAVVLGFTVQAMVQRPGAHELIVGIATDAVFGPVLLLGEGGTAVELRKDHAVALPPLNT
SLARDLVTRSRLAPLLAGYRGRPAADEQALLTTLLRVSQMACDLPWLAELDINPLLVDERGVLALDARVRLRPVPAGEGS
RLAIRPYPSALEERVQLAGGELLLRPIRPEDGQRLMAFYAGASPADMRLRFFMARREVPHSELARYSQIDYDREMTFIAL
APQASGDRVGDQAMVAEARAVCDPDNLRAEFAIQVTSGWQGKGLGRLLLDKLTAYLRERGTTEVVGQCLLENTGMAALAR
QAGFEVSTDPSRDTMTMRLPLR

Specific function: Unknown

COG id: COG1042

COG function: function code C; Acyl-CoA synthetase (NDP forming)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 N-acetyltransferase domain [H]

Homologues:

Organism=Escherichia coli, GI1788938, Length=894, Percent_Identity=42.6174496644295, Blast_Score=641, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000182
- InterPro:   IPR016181
- InterPro:   IPR011761
- InterPro:   IPR003781
- InterPro:   IPR016040
- InterPro:   IPR016102 [H]

Pfam domain/function: PF00583 Acetyltransf_1 [H]

EC number: NA

Molecular weight: Translated: 94478; Mature: 94346

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: PS50975 ATP_GRASP

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVRHLEALFQPASVAVIGASDREGSLGSVVLRNLKLGGFKGPVWPVNHRHASVDGGPAW
CCHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC
PDVESLPQAPDLAVVCTPAHTVPALIADLGRKGTRAAIVLTAGLKQPAAEGGSAGGLSGG
CCHHHCCCCCCEEEEECCCHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCCCCCCC
LSLEQAMLDAARPHLLRILGPNCIGALVPGVGLNASFAPGNAQPGRLAFVTQSGALATAM
CHHHHHHHHHCCCCEEEEECCHHHHHHCCCCCCCCCCCCCCCCCCEEEEEECCCCHHHHH
LDWANSRGVGFSHFISLGDSADVDFGDVIDYLASDGGTRAILMYAESIKAARKFMSAARA
HHHCCCCCCCHHHHEECCCCCCCCHHHHHHHHHCCCCCEEEEEEHHHHHHHHHHHHHHHH
ASRNKPVIVVKAGRAPDGARAAASHTGALAGSDAVFDAAIRRAGMLRVDTLESLFDAAET
HCCCCCEEEEECCCCCCCCHHHHCCCCCCCCCHHHHHHHHHHCCCEEHHHHHHHHHHHHH
LAHARPWRGERLAILTNGGGAGVLAADALQLGGGSLAPLDEPTLAALDQCLPGTWSHGNP
HHHCCCCCCCEEEEEECCCCCCCHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCCCCCC
IDIIGDAPVSRYQDALRVLLAAPDVDAVLFMHAPTAIVASSEIALACLPMMQASAKPVLT
EEEECCCCHHHHHHHHHHHHCCCCCCEEEEEECCCCEEECCCHHHHHHHHHHCCCCCEEE
CWLGGAAVAAARQSSAGAGIASYSTPERAADAWLQLLGHARNQQALQQLPAATLDDFTPD
EEECHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHCCCCHHCCCCCC
RAQAGLLLEQALHEGREWLDGAPAQALLRAYGIPGVEAVQARDVEEAVAAASRIGYPVVL
HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCHHHHHCCHHHHHHHHHHCCCEEEE
KIVSPQVIHKSDVGGVVLGLASAEAVRAAAVKMSGQVTRLLPQAVVLGFTVQAMVQRPGA
EECCCHHEECCCCCCEEEEHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCC
HELIVGIATDAVFGPVLLLGEGGTAVELRKDHAVALPPLNTSLARDLVTRSRLAPLLAGY
CEEEEEEHHHHHHCCEEEECCCCCEEEEECCCEEECCCCCHHHHHHHHHHHHHHHHHHCC
RGRPAADEQALLTTLLRVSQMACDLPWLAELDINPLLVDERGVLALDARVRLRPVPAGEG
CCCCCCCHHHHHHHHHHHHHHHCCCCCEEECCCCEEEECCCCEEEEECEEEEEECCCCCC
SRLAIRPYPSALEERVQLAGGELLLRPIRPEDGQRLMAFYAGASPADMRLRFFMARREVP
CEEEECCCHHHHHHHHHHCCCEEEEECCCCCCCCEEEEEECCCCCHHHHHHHHHHHHCCC
HSELARYSQIDYDREMTFIALAPQASGDRVGDQAMVAEARAVCDPDNLRAEFAIQVTSGW
HHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHCCCCCCCCEEEEEEEECCC
QGKGLGRLLLDKLTAYLRERGTTEVVGQCLLENTGMAALARQAGFEVSTDPSRDTMTMRL
CCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCCCEEEEEE
PLR
CCC
>Mature Secondary Structure 
SVRHLEALFQPASVAVIGASDREGSLGSVVLRNLKLGGFKGPVWPVNHRHASVDGGPAW
CHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC
PDVESLPQAPDLAVVCTPAHTVPALIADLGRKGTRAAIVLTAGLKQPAAEGGSAGGLSGG
CCHHHCCCCCCEEEEECCCHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCCCCCCC
LSLEQAMLDAARPHLLRILGPNCIGALVPGVGLNASFAPGNAQPGRLAFVTQSGALATAM
CHHHHHHHHHCCCCEEEEECCHHHHHHCCCCCCCCCCCCCCCCCCEEEEEECCCCHHHHH
LDWANSRGVGFSHFISLGDSADVDFGDVIDYLASDGGTRAILMYAESIKAARKFMSAARA
HHHCCCCCCCHHHHEECCCCCCCCHHHHHHHHHCCCCCEEEEEEHHHHHHHHHHHHHHHH
ASRNKPVIVVKAGRAPDGARAAASHTGALAGSDAVFDAAIRRAGMLRVDTLESLFDAAET
HCCCCCEEEEECCCCCCCCHHHHCCCCCCCCCHHHHHHHHHHCCCEEHHHHHHHHHHHHH
LAHARPWRGERLAILTNGGGAGVLAADALQLGGGSLAPLDEPTLAALDQCLPGTWSHGNP
HHHCCCCCCCEEEEEECCCCCCCHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCCCCCC
IDIIGDAPVSRYQDALRVLLAAPDVDAVLFMHAPTAIVASSEIALACLPMMQASAKPVLT
EEEECCCCHHHHHHHHHHHHCCCCCCEEEEEECCCCEEECCCHHHHHHHHHHCCCCCEEE
CWLGGAAVAAARQSSAGAGIASYSTPERAADAWLQLLGHARNQQALQQLPAATLDDFTPD
EEECHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHCCCCHHCCCCCC
RAQAGLLLEQALHEGREWLDGAPAQALLRAYGIPGVEAVQARDVEEAVAAASRIGYPVVL
HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCHHHHHCCHHHHHHHHHHCCCEEEE
KIVSPQVIHKSDVGGVVLGLASAEAVRAAAVKMSGQVTRLLPQAVVLGFTVQAMVQRPGA
EECCCHHEECCCCCCEEEEHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCC
HELIVGIATDAVFGPVLLLGEGGTAVELRKDHAVALPPLNTSLARDLVTRSRLAPLLAGY
CEEEEEEHHHHHHCCEEEECCCCCEEEEECCCEEECCCCCHHHHHHHHHHHHHHHHHHCC
RGRPAADEQALLTTLLRVSQMACDLPWLAELDINPLLVDERGVLALDARVRLRPVPAGEG
CCCCCCCHHHHHHHHHHHHHHHCCCCCEEECCCCEEEECCCCEEEEECEEEEEECCCCCC
SRLAIRPYPSALEERVQLAGGELLLRPIRPEDGQRLMAFYAGASPADMRLRFFMARREVP
CEEEECCCHHHHHHHHHHCCCEEEEECCCCCCCCEEEEEECCCCCHHHHHHHHHHHHCCC
HSELARYSQIDYDREMTFIALAPQASGDRVGDQAMVAEARAVCDPDNLRAEFAIQVTSGW
HHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHCCCCCCCCEEEEEEEECCC
QGKGLGRLLLDKLTAYLRERGTTEVVGQCLLENTGMAALARQAGFEVSTDPSRDTMTMRL
CCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCCCEEEEEE
PLR
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]