Definition | Polaromonas sp. JS666 chromosome, complete genome. |
---|---|
Accession | NC_007948 |
Length | 5,200,264 |
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The map label for this gene is yfiQ [H]
Identifier: 91787102
GI number: 91787102
Start: 1246506
End: 1249217
Strand: Direct
Name: yfiQ [H]
Synonym: Bpro_1205
Alternate gene names: 91787102
Gene position: 1246506-1249217 (Clockwise)
Preceding gene: 91787099
Following gene: 91787103
Centisome position: 23.97
GC content: 70.69
Gene sequence:
>2712_bases ATGAGCGTACGTCATCTTGAAGCCCTGTTCCAACCTGCGTCGGTGGCCGTGATTGGCGCCTCCGACCGCGAGGGCAGCCT GGGGTCGGTGGTGCTGCGCAATCTCAAGCTCGGCGGCTTCAAGGGGCCGGTCTGGCCGGTCAACCACCGGCATGCGAGCG TGGATGGCGGCCCGGCCTGGCCCGATGTCGAGTCGCTGCCGCAGGCGCCCGACCTGGCCGTGGTCTGCACGCCGGCGCAC ACGGTGCCGGCATTGATCGCCGACCTGGGCCGCAAGGGTACGCGCGCTGCCATCGTGCTCACCGCAGGGCTGAAGCAGCC GGCCGCAGAGGGTGGCTCCGCCGGTGGGCTCTCAGGTGGCCTCTCGCTGGAGCAAGCCATGCTGGACGCTGCGCGGCCAC ACCTGCTGCGCATCCTGGGGCCCAACTGCATTGGCGCGCTGGTGCCGGGTGTCGGCCTGAATGCCAGCTTTGCGCCCGGC AATGCCCAGCCGGGCCGGCTCGCATTTGTGACCCAGTCCGGCGCGCTGGCCACCGCCATGCTGGACTGGGCCAACAGCCG CGGCGTCGGTTTTTCGCATTTCATCTCGCTGGGCGACAGCGCCGATGTGGATTTTGGCGACGTGATCGACTACCTGGCCA GCGACGGCGGGACCCGGGCCATCCTGATGTACGCGGAATCCATCAAGGCGGCGCGAAAGTTCATGTCGGCCGCGCGTGCG GCCTCGCGCAACAAGCCGGTGATCGTGGTCAAGGCCGGGCGCGCACCCGATGGTGCCCGGGCGGCCGCCTCGCACACCGG AGCCCTCGCCGGCTCCGATGCCGTGTTCGACGCCGCCATCCGGCGGGCCGGCATGTTGCGGGTCGACACGCTGGAGTCGC TCTTCGATGCCGCCGAAACGCTGGCCCATGCGCGGCCCTGGCGCGGCGAGCGGCTGGCCATTCTCACCAACGGCGGCGGT GCCGGGGTGCTGGCAGCCGATGCGCTGCAGCTGGGGGGCGGCAGCCTGGCGCCACTGGATGAGCCGACGCTGGCCGCTCT TGATCAATGCCTGCCCGGAACCTGGTCGCACGGCAACCCCATCGACATCATTGGCGATGCCCCGGTCAGCCGTTACCAGG ACGCCTTGCGCGTACTGCTGGCTGCGCCGGACGTCGATGCCGTGCTGTTCATGCATGCGCCGACGGCCATTGTTGCGTCC AGCGAGATCGCGCTGGCCTGCCTGCCGATGATGCAGGCTTCGGCCAAGCCGGTACTGACCTGCTGGCTGGGCGGTGCCGC CGTGGCGGCTGCGCGCCAGTCCTCCGCGGGGGCGGGCATCGCCTCCTACAGCACGCCTGAACGCGCCGCCGACGCATGGC TGCAGCTGCTCGGCCATGCGCGAAACCAGCAAGCCCTGCAACAGCTCCCGGCCGCCACGCTGGACGACTTCACGCCGGAC CGGGCGCAAGCCGGTTTGCTGCTTGAACAGGCGCTGCATGAGGGCCGCGAGTGGCTCGACGGGGCGCCGGCCCAGGCGCT GCTGCGGGCCTACGGCATCCCCGGCGTTGAAGCCGTGCAGGCCCGCGACGTGGAGGAGGCGGTTGCCGCCGCCAGCCGGA TCGGCTACCCGGTGGTCCTGAAGATTGTGTCGCCGCAGGTCATCCACAAATCCGATGTCGGTGGTGTGGTGCTGGGTCTG GCTTCCGCCGAAGCCGTCAGGGCCGCGGCCGTGAAGATGTCCGGGCAGGTGACGCGCCTGCTGCCGCAGGCGGTGGTGCT GGGCTTCACCGTGCAGGCCATGGTGCAACGCCCCGGCGCCCATGAGCTGATCGTGGGCATCGCCACCGACGCCGTGTTTG GTCCGGTCCTGCTGCTGGGCGAGGGCGGTACGGCCGTCGAGCTGCGCAAGGACCATGCGGTGGCCCTGCCGCCGCTCAAC ACCAGCCTGGCCCGTGACCTGGTCACGCGGAGCCGGCTGGCGCCGCTGCTGGCCGGTTATCGCGGCCGTCCGGCGGCGGA CGAGCAGGCGCTGCTGACCACCCTGCTGCGGGTGTCGCAGATGGCCTGCGACCTGCCCTGGCTGGCGGAACTCGACATCA ACCCGCTGCTGGTCGATGAGCGCGGCGTGCTGGCGCTGGATGCGCGGGTCAGGCTGCGGCCGGTGCCGGCGGGCGAGGGC AGCCGGCTTGCCATCCGCCCCTATCCGTCGGCTCTCGAGGAGCGCGTCCAGTTGGCGGGGGGCGAGCTGCTGCTGCGCCC GATCCGTCCCGAAGACGGCCAACGCCTGATGGCCTTTTATGCCGGCGCATCGCCCGCCGACATGCGCCTGCGATTTTTCA TGGCGCGGCGCGAGGTGCCGCATTCCGAACTGGCGCGCTACAGCCAGATCGACTACGACCGCGAGATGACTTTCATCGCG CTGGCGCCCCAGGCGTCCGGTGATCGCGTCGGTGATCAAGCGATGGTGGCGGAAGCGCGGGCCGTGTGCGACCCGGACAA CCTGCGGGCGGAGTTCGCCATCCAGGTGACGTCCGGCTGGCAGGGCAAGGGCCTGGGCCGCCTGCTGCTGGACAAGCTGA CCGCCTACCTGCGCGAGCGCGGCACGACCGAAGTCGTGGGGCAGTGCCTGCTGGAGAACACCGGCATGGCCGCGCTGGCA CGGCAGGCTGGCTTCGAGGTCTCAACCGATCCGTCCCGGGACACCATGACGATGCGCCTGCCGCTGCGCTGA
Upstream 100 bases:
>100_bases GCCAGCGCCGCAATCGTTGATCTAGAGCAAATGCGGACGCTGCCCGGGCGCTAATCTGGTCTGGTCAGACGGGATGGCCC GCCTGCGTGCAAGGAATCCC
Downstream 100 bases:
>100_bases AACCTTTTCAACTCAGGAGCCACCATGTCCACCTACCATCAAATCCTCGTGCCGGTCGACGGCAGCCCCACCTCGCAAAA GGCACTCGATGAAGCCATCA
Product: CoA-binding
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 903; Mature: 902
Protein sequence:
>903_residues MSVRHLEALFQPASVAVIGASDREGSLGSVVLRNLKLGGFKGPVWPVNHRHASVDGGPAWPDVESLPQAPDLAVVCTPAH TVPALIADLGRKGTRAAIVLTAGLKQPAAEGGSAGGLSGGLSLEQAMLDAARPHLLRILGPNCIGALVPGVGLNASFAPG NAQPGRLAFVTQSGALATAMLDWANSRGVGFSHFISLGDSADVDFGDVIDYLASDGGTRAILMYAESIKAARKFMSAARA ASRNKPVIVVKAGRAPDGARAAASHTGALAGSDAVFDAAIRRAGMLRVDTLESLFDAAETLAHARPWRGERLAILTNGGG AGVLAADALQLGGGSLAPLDEPTLAALDQCLPGTWSHGNPIDIIGDAPVSRYQDALRVLLAAPDVDAVLFMHAPTAIVAS SEIALACLPMMQASAKPVLTCWLGGAAVAAARQSSAGAGIASYSTPERAADAWLQLLGHARNQQALQQLPAATLDDFTPD RAQAGLLLEQALHEGREWLDGAPAQALLRAYGIPGVEAVQARDVEEAVAAASRIGYPVVLKIVSPQVIHKSDVGGVVLGL ASAEAVRAAAVKMSGQVTRLLPQAVVLGFTVQAMVQRPGAHELIVGIATDAVFGPVLLLGEGGTAVELRKDHAVALPPLN TSLARDLVTRSRLAPLLAGYRGRPAADEQALLTTLLRVSQMACDLPWLAELDINPLLVDERGVLALDARVRLRPVPAGEG SRLAIRPYPSALEERVQLAGGELLLRPIRPEDGQRLMAFYAGASPADMRLRFFMARREVPHSELARYSQIDYDREMTFIA LAPQASGDRVGDQAMVAEARAVCDPDNLRAEFAIQVTSGWQGKGLGRLLLDKLTAYLRERGTTEVVGQCLLENTGMAALA RQAGFEVSTDPSRDTMTMRLPLR
Sequences:
>Translated_903_residues MSVRHLEALFQPASVAVIGASDREGSLGSVVLRNLKLGGFKGPVWPVNHRHASVDGGPAWPDVESLPQAPDLAVVCTPAH TVPALIADLGRKGTRAAIVLTAGLKQPAAEGGSAGGLSGGLSLEQAMLDAARPHLLRILGPNCIGALVPGVGLNASFAPG NAQPGRLAFVTQSGALATAMLDWANSRGVGFSHFISLGDSADVDFGDVIDYLASDGGTRAILMYAESIKAARKFMSAARA ASRNKPVIVVKAGRAPDGARAAASHTGALAGSDAVFDAAIRRAGMLRVDTLESLFDAAETLAHARPWRGERLAILTNGGG AGVLAADALQLGGGSLAPLDEPTLAALDQCLPGTWSHGNPIDIIGDAPVSRYQDALRVLLAAPDVDAVLFMHAPTAIVAS SEIALACLPMMQASAKPVLTCWLGGAAVAAARQSSAGAGIASYSTPERAADAWLQLLGHARNQQALQQLPAATLDDFTPD RAQAGLLLEQALHEGREWLDGAPAQALLRAYGIPGVEAVQARDVEEAVAAASRIGYPVVLKIVSPQVIHKSDVGGVVLGL ASAEAVRAAAVKMSGQVTRLLPQAVVLGFTVQAMVQRPGAHELIVGIATDAVFGPVLLLGEGGTAVELRKDHAVALPPLN TSLARDLVTRSRLAPLLAGYRGRPAADEQALLTTLLRVSQMACDLPWLAELDINPLLVDERGVLALDARVRLRPVPAGEG SRLAIRPYPSALEERVQLAGGELLLRPIRPEDGQRLMAFYAGASPADMRLRFFMARREVPHSELARYSQIDYDREMTFIA LAPQASGDRVGDQAMVAEARAVCDPDNLRAEFAIQVTSGWQGKGLGRLLLDKLTAYLRERGTTEVVGQCLLENTGMAALA RQAGFEVSTDPSRDTMTMRLPLR >Mature_902_residues SVRHLEALFQPASVAVIGASDREGSLGSVVLRNLKLGGFKGPVWPVNHRHASVDGGPAWPDVESLPQAPDLAVVCTPAHT VPALIADLGRKGTRAAIVLTAGLKQPAAEGGSAGGLSGGLSLEQAMLDAARPHLLRILGPNCIGALVPGVGLNASFAPGN AQPGRLAFVTQSGALATAMLDWANSRGVGFSHFISLGDSADVDFGDVIDYLASDGGTRAILMYAESIKAARKFMSAARAA SRNKPVIVVKAGRAPDGARAAASHTGALAGSDAVFDAAIRRAGMLRVDTLESLFDAAETLAHARPWRGERLAILTNGGGA GVLAADALQLGGGSLAPLDEPTLAALDQCLPGTWSHGNPIDIIGDAPVSRYQDALRVLLAAPDVDAVLFMHAPTAIVASS EIALACLPMMQASAKPVLTCWLGGAAVAAARQSSAGAGIASYSTPERAADAWLQLLGHARNQQALQQLPAATLDDFTPDR AQAGLLLEQALHEGREWLDGAPAQALLRAYGIPGVEAVQARDVEEAVAAASRIGYPVVLKIVSPQVIHKSDVGGVVLGLA SAEAVRAAAVKMSGQVTRLLPQAVVLGFTVQAMVQRPGAHELIVGIATDAVFGPVLLLGEGGTAVELRKDHAVALPPLNT SLARDLVTRSRLAPLLAGYRGRPAADEQALLTTLLRVSQMACDLPWLAELDINPLLVDERGVLALDARVRLRPVPAGEGS RLAIRPYPSALEERVQLAGGELLLRPIRPEDGQRLMAFYAGASPADMRLRFFMARREVPHSELARYSQIDYDREMTFIAL APQASGDRVGDQAMVAEARAVCDPDNLRAEFAIQVTSGWQGKGLGRLLLDKLTAYLRERGTTEVVGQCLLENTGMAALAR QAGFEVSTDPSRDTMTMRLPLR
Specific function: Unknown
COG id: COG1042
COG function: function code C; Acyl-CoA synthetase (NDP forming)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 N-acetyltransferase domain [H]
Homologues:
Organism=Escherichia coli, GI1788938, Length=894, Percent_Identity=42.6174496644295, Blast_Score=641, Evalue=0.0,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000182 - InterPro: IPR016181 - InterPro: IPR011761 - InterPro: IPR003781 - InterPro: IPR016040 - InterPro: IPR016102 [H]
Pfam domain/function: PF00583 Acetyltransf_1 [H]
EC number: NA
Molecular weight: Translated: 94478; Mature: 94346
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: PS50975 ATP_GRASP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVRHLEALFQPASVAVIGASDREGSLGSVVLRNLKLGGFKGPVWPVNHRHASVDGGPAW CCHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC PDVESLPQAPDLAVVCTPAHTVPALIADLGRKGTRAAIVLTAGLKQPAAEGGSAGGLSGG CCHHHCCCCCCEEEEECCCHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCCCCCCC LSLEQAMLDAARPHLLRILGPNCIGALVPGVGLNASFAPGNAQPGRLAFVTQSGALATAM CHHHHHHHHHCCCCEEEEECCHHHHHHCCCCCCCCCCCCCCCCCCEEEEEECCCCHHHHH LDWANSRGVGFSHFISLGDSADVDFGDVIDYLASDGGTRAILMYAESIKAARKFMSAARA HHHCCCCCCCHHHHEECCCCCCCCHHHHHHHHHCCCCCEEEEEEHHHHHHHHHHHHHHHH ASRNKPVIVVKAGRAPDGARAAASHTGALAGSDAVFDAAIRRAGMLRVDTLESLFDAAET HCCCCCEEEEECCCCCCCCHHHHCCCCCCCCCHHHHHHHHHHCCCEEHHHHHHHHHHHHH LAHARPWRGERLAILTNGGGAGVLAADALQLGGGSLAPLDEPTLAALDQCLPGTWSHGNP HHHCCCCCCCEEEEEECCCCCCCHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCCCCCC IDIIGDAPVSRYQDALRVLLAAPDVDAVLFMHAPTAIVASSEIALACLPMMQASAKPVLT EEEECCCCHHHHHHHHHHHHCCCCCCEEEEEECCCCEEECCCHHHHHHHHHHCCCCCEEE CWLGGAAVAAARQSSAGAGIASYSTPERAADAWLQLLGHARNQQALQQLPAATLDDFTPD EEECHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHCCCCHHCCCCCC RAQAGLLLEQALHEGREWLDGAPAQALLRAYGIPGVEAVQARDVEEAVAAASRIGYPVVL HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCHHHHHCCHHHHHHHHHHCCCEEEE KIVSPQVIHKSDVGGVVLGLASAEAVRAAAVKMSGQVTRLLPQAVVLGFTVQAMVQRPGA EECCCHHEECCCCCCEEEEHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCC HELIVGIATDAVFGPVLLLGEGGTAVELRKDHAVALPPLNTSLARDLVTRSRLAPLLAGY CEEEEEEHHHHHHCCEEEECCCCCEEEEECCCEEECCCCCHHHHHHHHHHHHHHHHHHCC RGRPAADEQALLTTLLRVSQMACDLPWLAELDINPLLVDERGVLALDARVRLRPVPAGEG CCCCCCCHHHHHHHHHHHHHHHCCCCCEEECCCCEEEECCCCEEEEECEEEEEECCCCCC SRLAIRPYPSALEERVQLAGGELLLRPIRPEDGQRLMAFYAGASPADMRLRFFMARREVP CEEEECCCHHHHHHHHHHCCCEEEEECCCCCCCCEEEEEECCCCCHHHHHHHHHHHHCCC HSELARYSQIDYDREMTFIALAPQASGDRVGDQAMVAEARAVCDPDNLRAEFAIQVTSGW HHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHCCCCCCCCEEEEEEEECCC QGKGLGRLLLDKLTAYLRERGTTEVVGQCLLENTGMAALARQAGFEVSTDPSRDTMTMRL CCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCCCEEEEEE PLR CCC >Mature Secondary Structure SVRHLEALFQPASVAVIGASDREGSLGSVVLRNLKLGGFKGPVWPVNHRHASVDGGPAW CHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC PDVESLPQAPDLAVVCTPAHTVPALIADLGRKGTRAAIVLTAGLKQPAAEGGSAGGLSGG CCHHHCCCCCCEEEEECCCHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCCCCCCC LSLEQAMLDAARPHLLRILGPNCIGALVPGVGLNASFAPGNAQPGRLAFVTQSGALATAM CHHHHHHHHHCCCCEEEEECCHHHHHHCCCCCCCCCCCCCCCCCCEEEEEECCCCHHHHH LDWANSRGVGFSHFISLGDSADVDFGDVIDYLASDGGTRAILMYAESIKAARKFMSAARA HHHCCCCCCCHHHHEECCCCCCCCHHHHHHHHHCCCCCEEEEEEHHHHHHHHHHHHHHHH ASRNKPVIVVKAGRAPDGARAAASHTGALAGSDAVFDAAIRRAGMLRVDTLESLFDAAET HCCCCCEEEEECCCCCCCCHHHHCCCCCCCCCHHHHHHHHHHCCCEEHHHHHHHHHHHHH LAHARPWRGERLAILTNGGGAGVLAADALQLGGGSLAPLDEPTLAALDQCLPGTWSHGNP HHHCCCCCCCEEEEEECCCCCCCHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCCCCCC IDIIGDAPVSRYQDALRVLLAAPDVDAVLFMHAPTAIVASSEIALACLPMMQASAKPVLT EEEECCCCHHHHHHHHHHHHCCCCCCEEEEEECCCCEEECCCHHHHHHHHHHCCCCCEEE CWLGGAAVAAARQSSAGAGIASYSTPERAADAWLQLLGHARNQQALQQLPAATLDDFTPD EEECHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHCCCCHHCCCCCC RAQAGLLLEQALHEGREWLDGAPAQALLRAYGIPGVEAVQARDVEEAVAAASRIGYPVVL HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCHHHHHCCHHHHHHHHHHCCCEEEE KIVSPQVIHKSDVGGVVLGLASAEAVRAAAVKMSGQVTRLLPQAVVLGFTVQAMVQRPGA EECCCHHEECCCCCCEEEEHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCC HELIVGIATDAVFGPVLLLGEGGTAVELRKDHAVALPPLNTSLARDLVTRSRLAPLLAGY CEEEEEEHHHHHHCCEEEECCCCCEEEEECCCEEECCCCCHHHHHHHHHHHHHHHHHHCC RGRPAADEQALLTTLLRVSQMACDLPWLAELDINPLLVDERGVLALDARVRLRPVPAGEG CCCCCCCHHHHHHHHHHHHHHHCCCCCEEECCCCEEEECCCCEEEEECEEEEEECCCCCC SRLAIRPYPSALEERVQLAGGELLLRPIRPEDGQRLMAFYAGASPADMRLRFFMARREVP CEEEECCCHHHHHHHHHHCCCEEEEECCCCCCCCEEEEEECCCCCHHHHHHHHHHHHCCC HSELARYSQIDYDREMTFIALAPQASGDRVGDQAMVAEARAVCDPDNLRAEFAIQVTSGW HHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHCCCCCCCCEEEEEEEECCC QGKGLGRLLLDKLTAYLRERGTTEVVGQCLLENTGMAALARQAGFEVSTDPSRDTMTMRL CCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCCCEEEEEE PLR CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]