Definition | Polaromonas sp. JS666 chromosome, complete genome. |
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Accession | NC_007948 |
Length | 5,200,264 |
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The map label for this gene is pilJ [H]
Identifier: 91787037
GI number: 91787037
Start: 1175672
End: 1177750
Strand: Direct
Name: pilJ [H]
Synonym: Bpro_1139
Alternate gene names: 91787037
Gene position: 1175672-1177750 (Clockwise)
Preceding gene: 91787036
Following gene: 91787038
Centisome position: 22.61
GC content: 62.63
Gene sequence:
>2079_bases GTGGAAAATCCCGACCAGCTTTCGCTGCCCCTGCTGGGTCGCCGCACCATAGGCCAGCACCAGCGAATCCTGGTGGGCTT GCTGGCTCTGGCGGTGGTGGTGCTGGGTACCGTGACCTTCCTGGCGCTGAACCAGGCCGACAAGGTCGCCCAGCAGGTGG CGGCAACCGGCCAGTCACTGATGCAGTCGCAGCGCCTGGCAAAGTCTGTATCGCAAGCCCTGGTGGGAAGTGCCCAGGCT TTCCCGGATGTGCGCGAAAGCTCCGACGTGCTGGCCAAAACCGTGCGCGGCCTGAAGTCCGGCGAGGACAGCCTGCGCCT GGCGCCTGTTGCCGAGGCATTGCAGCCCGACGTTGAAAAGGTCACGCCCTTCATGGAGCGCGCCGAGAAAAATGCGAAAA CCGTGATGGGCCAGCAAAACATTCTGACGCAGGTGGGTAACGCGCTGCGCACCATCAACCGCCAGTCATCCGACTTGCTG GAAATCGCTGAAACGGTGTCCTCGCTCAAGCTTCAGCAAAATGCCGCGCCCGCTGAAATTTCTGCGTCCGGCCAGCTGGT GATGTTGACCCAGCGGATCGGCAAGTCTGCCAATGAGTTCCTGACCATGGAAGGCGTGAGCCCCGAGGCCGTGTTCCTGC TGGGCAAGGACTTGAACTCCTTCAAGGAAATTGCCCAAGGTCTGCAGGATGGCAGTCCTGAGCTGCGCCTGAGCGGCTCC AAAGACCCGCAGACCCGCGAGCGGCTGGAGGCTCTGATGGCGCTTTATGAGCAGACACGCGTGCAGGCGGGTGCCATTCT GGGCAATCTGCAGGGCCTGGTCTCAGCCCGTGAAGCCCAGTCTTCGATCATTGCTGACAGTGAACCGCTGCGCCGTGGCC TTGAGGAACTACAGGGCAAGCTGTCTTCGCAGACCGGCCTGGGCGCCGGGGCGTTGACGGTCCTGGTCATTGCGGCGGCC TTCGCGCTGCTGTGCGCGGCAGGTCTGGCCCGTTTGCAGGTGCAGGACAGCCAGCAGCGGCAGGCGGTGGCCGAGACGCA GCGACAGGAAGCCAAAAGCCAGGAACAGGACGCCAAGCGCGTCAATGACGCCAACCAGGCTGCCATTTTGCGCCTGATGA ACGAGCTGCAGACAGTGGCTGAAGGCGATCTGACCCAGGAAGCCACGGTGACCGAGGATATTACCGGTGCCATTGCCGAC TCGGTGAATTACACGGTGGAGGAGTTGCGCCAGCTGGTGGGTAACGTGCAGAACACGGCGACCCGGGTTGCACAGACGAC GGCGCAGGTGGAAAGCACGTCCACGGAGCTGCTGGCAGCGTCGACCGAACAGCTGCGCGAGATTCGCGAGACCGGCCAGT CGGTGCTGGACATGGCGTCCCGAATCAACGAGGTGTCCACCCAGGCTCAGGAGTCTTCTCAAGTGGCCCGCCAGTCTCTG ACAGCGGCTGAGTCAGGTTTGCAGGCGGTGCAAAACGCGATCGGCGGTATGAACTCCATCCGGGACCAGATTCAGGAAAC TTCCAAGCGGATCAAGCGGCTGGGTGAGTCATCCCAGGAGATTGGCGAGATTACCGAGCTGATCTCGGACATTACCGAGC AGACCAACGTTCTGGCGCTGAACGCTGCCATTCAGGCGGCGTCAGCCGGTGAGGCCGGACGCGGTTTCTCGGTGGTGGCC GAGGAGGTGCAGCGGCTGGCGGAGCGTTCCGCCGATGCGACGCGCCAGATTTCGGCGCTGGTGAAAGCGATTCAGACCGA CACCCAGGATGCGGTAGCCGCCATGGAGCGCTCAACGCAGGGTGTGGTCGAGGGGGCCAAGCTGTCCGATAACGCCGGTA CGGCACTGACTGAAATTGACCAGGTGTCACGCCGTCTTGCCGATCTGATTGAGCAGATTTCCAATTCAGCCTCCCGGGAG GCCGCATCGGCCAACGTGGTGGCGGGCAACATCCAGCACATTTTTGCGGTGACTGAGCAAACCGGAGAAGGTACCCGCTC TACGGCCCAGCAGGTGCGTGACCTTTCCCGCATGGCGGAAGAGCTGCGCCAGTCAGTGTCCCGATTCAAGATCGCCTGA
Upstream 100 bases:
>100_bases AGGACTACCTTCTTTTAATGCCGCAGCCGCTCGCCAGATGGATGGCAACCAGGACGCCTTTGCGCCAAGCCGGGTGGCGG CAACCGAGGAGGGCGTGTCG
Downstream 100 bases:
>100_bases TGACAACCTGTTGTGCGTTGACCGCAACCTCAGCCTCCGACACCGATTCCTGAACCGGCCCGTTATCTATGCAATCCAAC GTCCCGAATTCAAAAACTGC
Product: methyl-accepting chemotaxis sensory transducer
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 692; Mature: 692
Protein sequence:
>692_residues MENPDQLSLPLLGRRTIGQHQRILVGLLALAVVVLGTVTFLALNQADKVAQQVAATGQSLMQSQRLAKSVSQALVGSAQA FPDVRESSDVLAKTVRGLKSGEDSLRLAPVAEALQPDVEKVTPFMERAEKNAKTVMGQQNILTQVGNALRTINRQSSDLL EIAETVSSLKLQQNAAPAEISASGQLVMLTQRIGKSANEFLTMEGVSPEAVFLLGKDLNSFKEIAQGLQDGSPELRLSGS KDPQTRERLEALMALYEQTRVQAGAILGNLQGLVSAREAQSSIIADSEPLRRGLEELQGKLSSQTGLGAGALTVLVIAAA FALLCAAGLARLQVQDSQQRQAVAETQRQEAKSQEQDAKRVNDANQAAILRLMNELQTVAEGDLTQEATVTEDITGAIAD SVNYTVEELRQLVGNVQNTATRVAQTTAQVESTSTELLAASTEQLREIRETGQSVLDMASRINEVSTQAQESSQVARQSL TAAESGLQAVQNAIGGMNSIRDQIQETSKRIKRLGESSQEIGEITELISDITEQTNVLALNAAIQAASAGEAGRGFSVVA EEVQRLAERSADATRQISALVKAIQTDTQDAVAAMERSTQGVVEGAKLSDNAGTALTEIDQVSRRLADLIEQISNSASRE AASANVVAGNIQHIFAVTEQTGEGTRSTAQQVRDLSRMAEELRQSVSRFKIA
Sequences:
>Translated_692_residues MENPDQLSLPLLGRRTIGQHQRILVGLLALAVVVLGTVTFLALNQADKVAQQVAATGQSLMQSQRLAKSVSQALVGSAQA FPDVRESSDVLAKTVRGLKSGEDSLRLAPVAEALQPDVEKVTPFMERAEKNAKTVMGQQNILTQVGNALRTINRQSSDLL EIAETVSSLKLQQNAAPAEISASGQLVMLTQRIGKSANEFLTMEGVSPEAVFLLGKDLNSFKEIAQGLQDGSPELRLSGS KDPQTRERLEALMALYEQTRVQAGAILGNLQGLVSAREAQSSIIADSEPLRRGLEELQGKLSSQTGLGAGALTVLVIAAA FALLCAAGLARLQVQDSQQRQAVAETQRQEAKSQEQDAKRVNDANQAAILRLMNELQTVAEGDLTQEATVTEDITGAIAD SVNYTVEELRQLVGNVQNTATRVAQTTAQVESTSTELLAASTEQLREIRETGQSVLDMASRINEVSTQAQESSQVARQSL TAAESGLQAVQNAIGGMNSIRDQIQETSKRIKRLGESSQEIGEITELISDITEQTNVLALNAAIQAASAGEAGRGFSVVA EEVQRLAERSADATRQISALVKAIQTDTQDAVAAMERSTQGVVEGAKLSDNAGTALTEIDQVSRRLADLIEQISNSASRE AASANVVAGNIQHIFAVTEQTGEGTRSTAQQVRDLSRMAEELRQSVSRFKIA >Mature_692_residues MENPDQLSLPLLGRRTIGQHQRILVGLLALAVVVLGTVTFLALNQADKVAQQVAATGQSLMQSQRLAKSVSQALVGSAQA FPDVRESSDVLAKTVRGLKSGEDSLRLAPVAEALQPDVEKVTPFMERAEKNAKTVMGQQNILTQVGNALRTINRQSSDLL EIAETVSSLKLQQNAAPAEISASGQLVMLTQRIGKSANEFLTMEGVSPEAVFLLGKDLNSFKEIAQGLQDGSPELRLSGS KDPQTRERLEALMALYEQTRVQAGAILGNLQGLVSAREAQSSIIADSEPLRRGLEELQGKLSSQTGLGAGALTVLVIAAA FALLCAAGLARLQVQDSQQRQAVAETQRQEAKSQEQDAKRVNDANQAAILRLMNELQTVAEGDLTQEATVTEDITGAIAD SVNYTVEELRQLVGNVQNTATRVAQTTAQVESTSTELLAASTEQLREIRETGQSVLDMASRINEVSTQAQESSQVARQSL TAAESGLQAVQNAIGGMNSIRDQIQETSKRIKRLGESSQEIGEITELISDITEQTNVLALNAAIQAASAGEAGRGFSVVA EEVQRLAERSADATRQISALVKAIQTDTQDAVAAMERSTQGVVEGAKLSDNAGTALTEIDQVSRRLADLIEQISNSASRE AASANVVAGNIQHIFAVTEQTGEGTRSTAQQVRDLSRMAEELRQSVSRFKIA
Specific function: May be a part of a signal-transduction system that regulates twitching motility by controlling pilus function (extension and retraction) [H]
COG id: COG0840
COG function: function code NT; Methyl-accepting chemotaxis protein
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 methyl-accepting transducer domain [H]
Homologues:
Organism=Escherichia coli, GI2367378, Length=275, Percent_Identity=31.6363636363636, Blast_Score=109, Evalue=5e-25, Organism=Escherichia coli, GI1788195, Length=323, Percent_Identity=28.1733746130031, Blast_Score=103, Evalue=4e-23, Organism=Escherichia coli, GI1788194, Length=320, Percent_Identity=27.5, Blast_Score=99, Evalue=1e-21, Organism=Escherichia coli, GI1787690, Length=285, Percent_Identity=29.1228070175439, Blast_Score=95, Evalue=2e-20, Organism=Escherichia coli, GI1789453, Length=244, Percent_Identity=31.5573770491803, Blast_Score=90, Evalue=4e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004090 - InterPro: IPR004089 - InterPro: IPR003660 [H]
Pfam domain/function: PF00015 MCPsignal [H]
EC number: NA
Molecular weight: Translated: 73790; Mature: 73790
Theoretical pI: Translated: 4.62; Mature: 4.62
Prosite motif: PS50885 HAMP ; PS50111 CHEMOTAXIS_TRANSDUC_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.1 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.1 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MENPDQLSLPLLGRRTIGQHQRILVGLLALAVVVLGTVTFLALNQADKVAQQVAATGQSL CCCCCCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MQSQRLAKSVSQALVGSAQAFPDVRESSDVLAKTVRGLKSGEDSLRLAPVAEALQPDVEK HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCHHH VTPFMERAEKNAKTVMGQQNILTQVGNALRTINRQSSDLLEIAETVSSLKLQQNAAPAEI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCC SASGQLVMLTQRIGKSANEFLTMEGVSPEAVFLLGKDLNSFKEIAQGLQDGSPELRLSGS CCCCCEEEHHHHHCCCHHHEEEECCCCCCEEEEECCCHHHHHHHHHHHHCCCCCEEECCC KDPQTRERLEALMALYEQTRVQAGAILGNLQGLVSAREAQSSIIADSEPLRRGLEELQGK CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH LSSQTGLGAGALTVLVIAAAFALLCAAGLARLQVQDSQQRQAVAETQRQEAKSQEQDAKR HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH VNDANQAAILRLMNELQTVAEGDLTQEATVTEDITGAIADSVNYTVEELRQLVGNVQNTA HCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TRVAQTTAQVESTSTELLAASTEQLREIRETGQSVLDMASRINEVSTQAQESSQVARQSL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TAAESGLQAVQNAIGGMNSIRDQIQETSKRIKRLGESSQEIGEITELISDITEQTNVLAL HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCEEEH NAAIQAASAGEAGRGFSVVAEEVQRLAERSADATRQISALVKAIQTDTQDAVAAMERSTQ HHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHH GVVEGAKLSDNAGTALTEIDQVSRRLADLIEQISNSASREAASANVVAGNIQHIFAVTEQ HHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCCCEECCHHHHHHHHHH TGEGTRSTAQQVRDLSRMAEELRQSVSRFKIA CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MENPDQLSLPLLGRRTIGQHQRILVGLLALAVVVLGTVTFLALNQADKVAQQVAATGQSL CCCCCCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MQSQRLAKSVSQALVGSAQAFPDVRESSDVLAKTVRGLKSGEDSLRLAPVAEALQPDVEK HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCHHH VTPFMERAEKNAKTVMGQQNILTQVGNALRTINRQSSDLLEIAETVSSLKLQQNAAPAEI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCC SASGQLVMLTQRIGKSANEFLTMEGVSPEAVFLLGKDLNSFKEIAQGLQDGSPELRLSGS CCCCCEEEHHHHHCCCHHHEEEECCCCCCEEEEECCCHHHHHHHHHHHHCCCCCEEECCC KDPQTRERLEALMALYEQTRVQAGAILGNLQGLVSAREAQSSIIADSEPLRRGLEELQGK CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH LSSQTGLGAGALTVLVIAAAFALLCAAGLARLQVQDSQQRQAVAETQRQEAKSQEQDAKR HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH VNDANQAAILRLMNELQTVAEGDLTQEATVTEDITGAIADSVNYTVEELRQLVGNVQNTA HCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TRVAQTTAQVESTSTELLAASTEQLREIRETGQSVLDMASRINEVSTQAQESSQVARQSL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TAAESGLQAVQNAIGGMNSIRDQIQETSKRIKRLGESSQEIGEITELISDITEQTNVLAL HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCEEEH NAAIQAASAGEAGRGFSVVAEEVQRLAERSADATRQISALVKAIQTDTQDAVAAMERSTQ HHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHH GVVEGAKLSDNAGTALTEIDQVSRRLADLIEQISNSASREAASANVVAGNIQHIFAVTEQ HHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCCCEECCHHHHHHHHHH TGEGTRSTAQQVRDLSRMAEELRQSVSRFKIA CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 7908398; 10984043 [H]