The gene/protein map for NC_007948 is currently unavailable.
Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

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The map label for this gene is pilJ [H]

Identifier: 91787037

GI number: 91787037

Start: 1175672

End: 1177750

Strand: Direct

Name: pilJ [H]

Synonym: Bpro_1139

Alternate gene names: 91787037

Gene position: 1175672-1177750 (Clockwise)

Preceding gene: 91787036

Following gene: 91787038

Centisome position: 22.61

GC content: 62.63

Gene sequence:

>2079_bases
GTGGAAAATCCCGACCAGCTTTCGCTGCCCCTGCTGGGTCGCCGCACCATAGGCCAGCACCAGCGAATCCTGGTGGGCTT
GCTGGCTCTGGCGGTGGTGGTGCTGGGTACCGTGACCTTCCTGGCGCTGAACCAGGCCGACAAGGTCGCCCAGCAGGTGG
CGGCAACCGGCCAGTCACTGATGCAGTCGCAGCGCCTGGCAAAGTCTGTATCGCAAGCCCTGGTGGGAAGTGCCCAGGCT
TTCCCGGATGTGCGCGAAAGCTCCGACGTGCTGGCCAAAACCGTGCGCGGCCTGAAGTCCGGCGAGGACAGCCTGCGCCT
GGCGCCTGTTGCCGAGGCATTGCAGCCCGACGTTGAAAAGGTCACGCCCTTCATGGAGCGCGCCGAGAAAAATGCGAAAA
CCGTGATGGGCCAGCAAAACATTCTGACGCAGGTGGGTAACGCGCTGCGCACCATCAACCGCCAGTCATCCGACTTGCTG
GAAATCGCTGAAACGGTGTCCTCGCTCAAGCTTCAGCAAAATGCCGCGCCCGCTGAAATTTCTGCGTCCGGCCAGCTGGT
GATGTTGACCCAGCGGATCGGCAAGTCTGCCAATGAGTTCCTGACCATGGAAGGCGTGAGCCCCGAGGCCGTGTTCCTGC
TGGGCAAGGACTTGAACTCCTTCAAGGAAATTGCCCAAGGTCTGCAGGATGGCAGTCCTGAGCTGCGCCTGAGCGGCTCC
AAAGACCCGCAGACCCGCGAGCGGCTGGAGGCTCTGATGGCGCTTTATGAGCAGACACGCGTGCAGGCGGGTGCCATTCT
GGGCAATCTGCAGGGCCTGGTCTCAGCCCGTGAAGCCCAGTCTTCGATCATTGCTGACAGTGAACCGCTGCGCCGTGGCC
TTGAGGAACTACAGGGCAAGCTGTCTTCGCAGACCGGCCTGGGCGCCGGGGCGTTGACGGTCCTGGTCATTGCGGCGGCC
TTCGCGCTGCTGTGCGCGGCAGGTCTGGCCCGTTTGCAGGTGCAGGACAGCCAGCAGCGGCAGGCGGTGGCCGAGACGCA
GCGACAGGAAGCCAAAAGCCAGGAACAGGACGCCAAGCGCGTCAATGACGCCAACCAGGCTGCCATTTTGCGCCTGATGA
ACGAGCTGCAGACAGTGGCTGAAGGCGATCTGACCCAGGAAGCCACGGTGACCGAGGATATTACCGGTGCCATTGCCGAC
TCGGTGAATTACACGGTGGAGGAGTTGCGCCAGCTGGTGGGTAACGTGCAGAACACGGCGACCCGGGTTGCACAGACGAC
GGCGCAGGTGGAAAGCACGTCCACGGAGCTGCTGGCAGCGTCGACCGAACAGCTGCGCGAGATTCGCGAGACCGGCCAGT
CGGTGCTGGACATGGCGTCCCGAATCAACGAGGTGTCCACCCAGGCTCAGGAGTCTTCTCAAGTGGCCCGCCAGTCTCTG
ACAGCGGCTGAGTCAGGTTTGCAGGCGGTGCAAAACGCGATCGGCGGTATGAACTCCATCCGGGACCAGATTCAGGAAAC
TTCCAAGCGGATCAAGCGGCTGGGTGAGTCATCCCAGGAGATTGGCGAGATTACCGAGCTGATCTCGGACATTACCGAGC
AGACCAACGTTCTGGCGCTGAACGCTGCCATTCAGGCGGCGTCAGCCGGTGAGGCCGGACGCGGTTTCTCGGTGGTGGCC
GAGGAGGTGCAGCGGCTGGCGGAGCGTTCCGCCGATGCGACGCGCCAGATTTCGGCGCTGGTGAAAGCGATTCAGACCGA
CACCCAGGATGCGGTAGCCGCCATGGAGCGCTCAACGCAGGGTGTGGTCGAGGGGGCCAAGCTGTCCGATAACGCCGGTA
CGGCACTGACTGAAATTGACCAGGTGTCACGCCGTCTTGCCGATCTGATTGAGCAGATTTCCAATTCAGCCTCCCGGGAG
GCCGCATCGGCCAACGTGGTGGCGGGCAACATCCAGCACATTTTTGCGGTGACTGAGCAAACCGGAGAAGGTACCCGCTC
TACGGCCCAGCAGGTGCGTGACCTTTCCCGCATGGCGGAAGAGCTGCGCCAGTCAGTGTCCCGATTCAAGATCGCCTGA

Upstream 100 bases:

>100_bases
AGGACTACCTTCTTTTAATGCCGCAGCCGCTCGCCAGATGGATGGCAACCAGGACGCCTTTGCGCCAAGCCGGGTGGCGG
CAACCGAGGAGGGCGTGTCG

Downstream 100 bases:

>100_bases
TGACAACCTGTTGTGCGTTGACCGCAACCTCAGCCTCCGACACCGATTCCTGAACCGGCCCGTTATCTATGCAATCCAAC
GTCCCGAATTCAAAAACTGC

Product: methyl-accepting chemotaxis sensory transducer

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 692; Mature: 692

Protein sequence:

>692_residues
MENPDQLSLPLLGRRTIGQHQRILVGLLALAVVVLGTVTFLALNQADKVAQQVAATGQSLMQSQRLAKSVSQALVGSAQA
FPDVRESSDVLAKTVRGLKSGEDSLRLAPVAEALQPDVEKVTPFMERAEKNAKTVMGQQNILTQVGNALRTINRQSSDLL
EIAETVSSLKLQQNAAPAEISASGQLVMLTQRIGKSANEFLTMEGVSPEAVFLLGKDLNSFKEIAQGLQDGSPELRLSGS
KDPQTRERLEALMALYEQTRVQAGAILGNLQGLVSAREAQSSIIADSEPLRRGLEELQGKLSSQTGLGAGALTVLVIAAA
FALLCAAGLARLQVQDSQQRQAVAETQRQEAKSQEQDAKRVNDANQAAILRLMNELQTVAEGDLTQEATVTEDITGAIAD
SVNYTVEELRQLVGNVQNTATRVAQTTAQVESTSTELLAASTEQLREIRETGQSVLDMASRINEVSTQAQESSQVARQSL
TAAESGLQAVQNAIGGMNSIRDQIQETSKRIKRLGESSQEIGEITELISDITEQTNVLALNAAIQAASAGEAGRGFSVVA
EEVQRLAERSADATRQISALVKAIQTDTQDAVAAMERSTQGVVEGAKLSDNAGTALTEIDQVSRRLADLIEQISNSASRE
AASANVVAGNIQHIFAVTEQTGEGTRSTAQQVRDLSRMAEELRQSVSRFKIA

Sequences:

>Translated_692_residues
MENPDQLSLPLLGRRTIGQHQRILVGLLALAVVVLGTVTFLALNQADKVAQQVAATGQSLMQSQRLAKSVSQALVGSAQA
FPDVRESSDVLAKTVRGLKSGEDSLRLAPVAEALQPDVEKVTPFMERAEKNAKTVMGQQNILTQVGNALRTINRQSSDLL
EIAETVSSLKLQQNAAPAEISASGQLVMLTQRIGKSANEFLTMEGVSPEAVFLLGKDLNSFKEIAQGLQDGSPELRLSGS
KDPQTRERLEALMALYEQTRVQAGAILGNLQGLVSAREAQSSIIADSEPLRRGLEELQGKLSSQTGLGAGALTVLVIAAA
FALLCAAGLARLQVQDSQQRQAVAETQRQEAKSQEQDAKRVNDANQAAILRLMNELQTVAEGDLTQEATVTEDITGAIAD
SVNYTVEELRQLVGNVQNTATRVAQTTAQVESTSTELLAASTEQLREIRETGQSVLDMASRINEVSTQAQESSQVARQSL
TAAESGLQAVQNAIGGMNSIRDQIQETSKRIKRLGESSQEIGEITELISDITEQTNVLALNAAIQAASAGEAGRGFSVVA
EEVQRLAERSADATRQISALVKAIQTDTQDAVAAMERSTQGVVEGAKLSDNAGTALTEIDQVSRRLADLIEQISNSASRE
AASANVVAGNIQHIFAVTEQTGEGTRSTAQQVRDLSRMAEELRQSVSRFKIA
>Mature_692_residues
MENPDQLSLPLLGRRTIGQHQRILVGLLALAVVVLGTVTFLALNQADKVAQQVAATGQSLMQSQRLAKSVSQALVGSAQA
FPDVRESSDVLAKTVRGLKSGEDSLRLAPVAEALQPDVEKVTPFMERAEKNAKTVMGQQNILTQVGNALRTINRQSSDLL
EIAETVSSLKLQQNAAPAEISASGQLVMLTQRIGKSANEFLTMEGVSPEAVFLLGKDLNSFKEIAQGLQDGSPELRLSGS
KDPQTRERLEALMALYEQTRVQAGAILGNLQGLVSAREAQSSIIADSEPLRRGLEELQGKLSSQTGLGAGALTVLVIAAA
FALLCAAGLARLQVQDSQQRQAVAETQRQEAKSQEQDAKRVNDANQAAILRLMNELQTVAEGDLTQEATVTEDITGAIAD
SVNYTVEELRQLVGNVQNTATRVAQTTAQVESTSTELLAASTEQLREIRETGQSVLDMASRINEVSTQAQESSQVARQSL
TAAESGLQAVQNAIGGMNSIRDQIQETSKRIKRLGESSQEIGEITELISDITEQTNVLALNAAIQAASAGEAGRGFSVVA
EEVQRLAERSADATRQISALVKAIQTDTQDAVAAMERSTQGVVEGAKLSDNAGTALTEIDQVSRRLADLIEQISNSASRE
AASANVVAGNIQHIFAVTEQTGEGTRSTAQQVRDLSRMAEELRQSVSRFKIA

Specific function: May be a part of a signal-transduction system that regulates twitching motility by controlling pilus function (extension and retraction) [H]

COG id: COG0840

COG function: function code NT; Methyl-accepting chemotaxis protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI2367378, Length=275, Percent_Identity=31.6363636363636, Blast_Score=109, Evalue=5e-25,
Organism=Escherichia coli, GI1788195, Length=323, Percent_Identity=28.1733746130031, Blast_Score=103, Evalue=4e-23,
Organism=Escherichia coli, GI1788194, Length=320, Percent_Identity=27.5, Blast_Score=99, Evalue=1e-21,
Organism=Escherichia coli, GI1787690, Length=285, Percent_Identity=29.1228070175439, Blast_Score=95, Evalue=2e-20,
Organism=Escherichia coli, GI1789453, Length=244, Percent_Identity=31.5573770491803, Blast_Score=90, Evalue=4e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004090
- InterPro:   IPR004089
- InterPro:   IPR003660 [H]

Pfam domain/function: PF00015 MCPsignal [H]

EC number: NA

Molecular weight: Translated: 73790; Mature: 73790

Theoretical pI: Translated: 4.62; Mature: 4.62

Prosite motif: PS50885 HAMP ; PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.1 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.1 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MENPDQLSLPLLGRRTIGQHQRILVGLLALAVVVLGTVTFLALNQADKVAQQVAATGQSL
CCCCCCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MQSQRLAKSVSQALVGSAQAFPDVRESSDVLAKTVRGLKSGEDSLRLAPVAEALQPDVEK
HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCHHH
VTPFMERAEKNAKTVMGQQNILTQVGNALRTINRQSSDLLEIAETVSSLKLQQNAAPAEI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCC
SASGQLVMLTQRIGKSANEFLTMEGVSPEAVFLLGKDLNSFKEIAQGLQDGSPELRLSGS
CCCCCEEEHHHHHCCCHHHEEEECCCCCCEEEEECCCHHHHHHHHHHHHCCCCCEEECCC
KDPQTRERLEALMALYEQTRVQAGAILGNLQGLVSAREAQSSIIADSEPLRRGLEELQGK
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
LSSQTGLGAGALTVLVIAAAFALLCAAGLARLQVQDSQQRQAVAETQRQEAKSQEQDAKR
HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH
VNDANQAAILRLMNELQTVAEGDLTQEATVTEDITGAIADSVNYTVEELRQLVGNVQNTA
HCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TRVAQTTAQVESTSTELLAASTEQLREIRETGQSVLDMASRINEVSTQAQESSQVARQSL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TAAESGLQAVQNAIGGMNSIRDQIQETSKRIKRLGESSQEIGEITELISDITEQTNVLAL
HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCEEEH
NAAIQAASAGEAGRGFSVVAEEVQRLAERSADATRQISALVKAIQTDTQDAVAAMERSTQ
HHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
GVVEGAKLSDNAGTALTEIDQVSRRLADLIEQISNSASREAASANVVAGNIQHIFAVTEQ
HHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCCCEECCHHHHHHHHHH
TGEGTRSTAQQVRDLSRMAEELRQSVSRFKIA
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MENPDQLSLPLLGRRTIGQHQRILVGLLALAVVVLGTVTFLALNQADKVAQQVAATGQSL
CCCCCCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MQSQRLAKSVSQALVGSAQAFPDVRESSDVLAKTVRGLKSGEDSLRLAPVAEALQPDVEK
HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCHHH
VTPFMERAEKNAKTVMGQQNILTQVGNALRTINRQSSDLLEIAETVSSLKLQQNAAPAEI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCC
SASGQLVMLTQRIGKSANEFLTMEGVSPEAVFLLGKDLNSFKEIAQGLQDGSPELRLSGS
CCCCCEEEHHHHHCCCHHHEEEECCCCCCEEEEECCCHHHHHHHHHHHHCCCCCEEECCC
KDPQTRERLEALMALYEQTRVQAGAILGNLQGLVSAREAQSSIIADSEPLRRGLEELQGK
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
LSSQTGLGAGALTVLVIAAAFALLCAAGLARLQVQDSQQRQAVAETQRQEAKSQEQDAKR
HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH
VNDANQAAILRLMNELQTVAEGDLTQEATVTEDITGAIADSVNYTVEELRQLVGNVQNTA
HCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TRVAQTTAQVESTSTELLAASTEQLREIRETGQSVLDMASRINEVSTQAQESSQVARQSL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TAAESGLQAVQNAIGGMNSIRDQIQETSKRIKRLGESSQEIGEITELISDITEQTNVLAL
HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCEEEH
NAAIQAASAGEAGRGFSVVAEEVQRLAERSADATRQISALVKAIQTDTQDAVAAMERSTQ
HHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
GVVEGAKLSDNAGTALTEIDQVSRRLADLIEQISNSASREAASANVVAGNIQHIFAVTEQ
HHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCCCEECCHHHHHHHHHH
TGEGTRSTAQQVRDLSRMAEELRQSVSRFKIA
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7908398; 10984043 [H]