Definition | Polaromonas sp. JS666 chromosome, complete genome. |
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Accession | NC_007948 |
Length | 5,200,264 |
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The map label for this gene is 91787036
Identifier: 91787036
GI number: 91787036
Start: 1174897
End: 1175427
Strand: Direct
Name: 91787036
Synonym: Bpro_1138
Alternate gene names: NA
Gene position: 1174897-1175427 (Clockwise)
Preceding gene: 91787035
Following gene: 91787037
Centisome position: 22.59
GC content: 58.38
Gene sequence:
>531_bases ATGGCGAACAGACAAGCCCTCAGAGAGCTACAAACCCGGCTGGCCGACAGGTTGCAGGTTGCGCGAACGCAGGGCGTTGC TGCATCCTGGCTGGCTGTGGAGGCTGGCGGAAGGAACTACCTGTTTCCCCTGAGCCAGTCCGGTGAAATTTTTCCGTGGG TTCACACGCAGGCGGTTCCCTATACCCAGGCATGGTTTGCCGGCGTTGCCAATTTGCGCGGCGGCCTCTTTGGCGTGGTT GATCTGGCAAGTTACGTGAGCGGCGAGGCGCCGCCCCCGAAGACTGAACTTGCGCGCGCTGAGTCGAGGCTTGTTGCGCT CAATAGTGCGCTTGAAGTCAATTGCGCCCTGCTGATCGACAGACTGGCCGGCTTGCGCAAGCAGGATGCCTTCGTCGACT TCTCGGAAAAGGCGCCCGATGCGCCTGAATTTTTTGGCAACCAGTACGTTGACCTCAATGGTGCAAGCTGGCAGGAAATC AATCTTCAGTTGCTTGCCCAGCAAGCTCATTTTTTGACGATCGGCGCATAG
Upstream 100 bases:
>100_bases CGTCAGGGGGCTCGCGACTACATCACCAAGCCTGTGGATGCTGATGAGTTGATGGCCAAAATCAAGGCCCTTGGCTGATC GACAGGCGTAAAACCAGAGC
Downstream 100 bases:
>100_bases CGCGCCCGTTTCTCCCGGAAGGCTCACCATGTCTGTTTTTGCAAGTATCCAGAAGCTGTTTAAACCGAAGTCTGTCCACC CAGAAGACAGCATGGACATG
Product: CheW-like protein
Products: NA
Alternate protein names: CheW-Like Protein; PilI Protein Involved In Twitching Motility; Type IV Pilus Signal Transduction Protein PilI; Chew Protein; Pilus Biogenesis Protein; Twitching Motility Protein PilI; Twitching Motility Signal Transduction Protein; TWITCHING MOTILITY PROTEIN CheW Domain; PilI Twitching Motility Protein; Twitching Motility Protein
Number of amino acids: Translated: 176; Mature: 175
Protein sequence:
>176_residues MANRQALRELQTRLADRLQVARTQGVAASWLAVEAGGRNYLFPLSQSGEIFPWVHTQAVPYTQAWFAGVANLRGGLFGVV DLASYVSGEAPPPKTELARAESRLVALNSALEVNCALLIDRLAGLRKQDAFVDFSEKAPDAPEFFGNQYVDLNGASWQEI NLQLLAQQAHFLTIGA
Sequences:
>Translated_176_residues MANRQALRELQTRLADRLQVARTQGVAASWLAVEAGGRNYLFPLSQSGEIFPWVHTQAVPYTQAWFAGVANLRGGLFGVV DLASYVSGEAPPPKTELARAESRLVALNSALEVNCALLIDRLAGLRKQDAFVDFSEKAPDAPEFFGNQYVDLNGASWQEI NLQLLAQQAHFLTIGA >Mature_175_residues ANRQALRELQTRLADRLQVARTQGVAASWLAVEAGGRNYLFPLSQSGEIFPWVHTQAVPYTQAWFAGVANLRGGLFGVVD LASYVSGEAPPPKTELARAESRLVALNSALEVNCALLIDRLAGLRKQDAFVDFSEKAPDAPEFFGNQYVDLNGASWQEIN LQLLAQQAHFLTIGA
Specific function: Unknown
COG id: COG0835
COG function: function code NT; Chemotaxis signal transduction protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19199; Mature: 19068
Theoretical pI: Translated: 5.20; Mature: 5.20
Prosite motif: PS50851 CHEW
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MANRQALRELQTRLADRLQVARTQGVAASWLAVEAGGRNYLFPLSQSGEIFPWVHTQAVP CCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCEEEEECCCCCCCCCEECCCCCC YTQAWFAGVANLRGGLFGVVDLASYVSGEAPPPKTELARAESRLVALNSALEVNCALLID CHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHEEECCCHHHHHHHHHH RLAGLRKQDAFVDFSEKAPDAPEFFGNQYVDLNGASWQEINLQLLAQQAHFLTIGA HHHCCCCCCCEEECCCCCCCCHHHHCCEEEECCCCCCHHHHHHHHCCCCCEEEECC >Mature Secondary Structure ANRQALRELQTRLADRLQVARTQGVAASWLAVEAGGRNYLFPLSQSGEIFPWVHTQAVP CCHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCEEEEECCCCCCCCCEECCCCCC YTQAWFAGVANLRGGLFGVVDLASYVSGEAPPPKTELARAESRLVALNSALEVNCALLID CHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHEEECCCHHHHHHHHHH RLAGLRKQDAFVDFSEKAPDAPEFFGNQYVDLNGASWQEINLQLLAQQAHFLTIGA HHHCCCCCCCEEECCCCCCCCHHHHCCEEEECCCCCCHHHHHHHHCCCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA