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The map label for this gene is fis [C]

Identifier: 91787029

GI number: 91787029

Start: 1169446

End: 1169682

Strand: Direct

Name: fis [C]

Synonym: Bpro_1131

Alternate gene names: 91787029

Gene position: 1169446-1169682 (Clockwise)

Preceding gene: 91787028

Following gene: 91787030

Centisome position: 22.49

GC content: 55.7

Gene sequence:

>237_bases
ATGAGCAAAAAACACATAGAAGAGTGCGTACGCACCAGTCTCGAGGGCTATTTCAGGGACCTGCGCGGTACCGATCCCGA
TGGCATGTACGACATGATGGTCCGGGTGGTTGAAAAACCCCTGCTGGAAGTGGTCATGCAGCATGCCGAGCAAAACCAGT
CGCGCGCCGCCGAGTGGCTGGGGCTGAACCGCAACACCCTTCGCAAGAAGCTGGTTGAGCACAAGCTCATCAAATAA

Upstream 100 bases:

>100_bases
TTGGCGACCGGATGGACCGCATTCCGGCAACTGGGGACGCCGGGAGCGGGCCGAGGCAGGCATGGATGAACAAAGATAAA
AATCAGGAGGAAGCTGCTGC

Downstream 100 bases:

>100_bases
GAACAAGCCCTGTACATATCACCGTCCGGTTTGCCGGCACGGCATTTTTTCAAAGACAAAAATGAACGCATTGATTTCCG
TCTCCGACAAGACCGGTATC

Product: DNA-binding protein Fis

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 78; Mature: 77

Protein sequence:

>78_residues
MSKKHIEECVRTSLEGYFRDLRGTDPDGMYDMMVRVVEKPLLEVVMQHAEQNQSRAAEWLGLNRNTLRKKLVEHKLIK

Sequences:

>Translated_78_residues
MSKKHIEECVRTSLEGYFRDLRGTDPDGMYDMMVRVVEKPLLEVVMQHAEQNQSRAAEWLGLNRNTLRKKLVEHKLIK
>Mature_77_residues
SKKHIEECVRTSLEGYFRDLRGTDPDGMYDMMVRVVEKPLLEVVMQHAEQNQSRAAEWLGLNRNTLRKKLVEHKLIK

Specific function: Activates Ribosomal RNA Transcription. Plays A Direct Role In Upstream Activation Of rRNA Promoters. Binds To A Recombinational Enhancer Sequence That Is Required To Stimulate Hin-Mediated DNA Inversion. Prevents Initiation Of DNA Replication From Oric.

COG id: COG2901

COG function: function code KL; Factor for inversion stimulation Fis, transcriptional activator

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transcriptional regulatory fis family [H]

Homologues:

Organism=Escherichia coli, GI1789661, Length=76, Percent_Identity=40.7894736842105, Blast_Score=70, Evalue=2e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005412
- InterPro:   IPR020441
- InterPro:   IPR009057
- InterPro:   IPR002197 [H]

Pfam domain/function: PF02954 HTH_8 [H]

EC number: NA

Molecular weight: Translated: 9198; Mature: 9067

Theoretical pI: Translated: 9.18; Mature: 9.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
6.4 %Met     (Translated Protein)
7.7 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
5.2 %Met     (Mature Protein)
6.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKKHIEECVRTSLEGYFRDLRGTDPDGMYDMMVRVVEKPLLEVVMQHAEQNQSRAAEWL
CCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GLNRNTLRKKLVEHKLIK
CCCHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SKKHIEECVRTSLEGYFRDLRGTDPDGMYDMMVRVVEKPLLEVVMQHAEQNQSRAAEWL
CHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GLNRNTLRKKLVEHKLIK
CCCHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11823852 [H]