Definition | Polaromonas sp. JS666 chromosome, complete genome. |
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Accession | NC_007948 |
Length | 5,200,264 |
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The map label for this gene is htpX [H]
Identifier: 91786931
GI number: 91786931
Start: 1058502
End: 1059377
Strand: Direct
Name: htpX [H]
Synonym: Bpro_1032
Alternate gene names: 91786931
Gene position: 1058502-1059377 (Clockwise)
Preceding gene: 91786930
Following gene: 91786947
Centisome position: 20.35
GC content: 62.67
Gene sequence:
>876_bases ATGAAACGCATCTTTTTGTTTATCCTGACCAACATTGCCGTCGTGGCCGTGCTGGGCATTGTGGCCAGCCTGCTCGGCGT CAACCGCTTCCTCACGGCCAATGGCCTGAACCTCTCGGCGCTGCTCGGCTTTGCGCTGATCATGGGTTTCGGCGGCGCGA TCATTTCACTGCTGATCAGCAAGCCCGTGGCCAAGTGGAGCGCCGGCGTGCGCATCATCAACGATGCCCAGAACGCCGAC GAGGCCTGGATTGTCGAGACCGTCCGCAAACTGGCTGACAAGGCGCAGATCGGCATGCCCGAAGTGGGCATTTTCGAAGG CGCGCCCAACGCCTTTGCCACTGGCGCGTTCAAGAATTCATCGCTGGTGGCGGTGTCCACCGGTTTGCTGCAGGGCATGA CCCGCGAAGAAATCGAAGCCGTGATCGGCCATGAGATCGCCCACGTCGCCAATGGCGACATGGTCACCATGACGCTGATC CAGGGCGTGATGAACACCTTTGTGGTGTTCCTGTCGCGCGTCATCGGCTATGCGGTTGACAGCTTTTTGCGCCGCGGCAG CGACAACAACTCCGGCCCCGGCATCGGCTACTACGTCAGCACCATCGTGCTGGACATCGTGCTGGGTTTTGCCGCCGCCA TCGTCGTGGCCTGGTTTTCGCGTCATCGCGAGTTCCGCGCGGATGCGGGTTCCGCCCAGCTGCTGGGCCGCAAGCAGCCC ATGATGAATGCGCTGGCCCGCCTCGGCGGCATGCAGCCCGGCGAGTTGCCCAAGGCCGTGGAAGCCATGGGCATCACCGG CGGCATCGGCAAATGGTTCGCCACGCATCCGCCGATTGAAGAGCGCATTGCGGCGCTGCAGAATGCCCCAGCCTGA
Upstream 100 bases:
>100_bases TGATTTGGGAGGAAGCCCCCCAATTTGTCCGGAACGCAACTCTCACGGCAGCATGGCTGCTGCCCTTGCCCCTGGTTATC GACCCCCCCACGGAGAATTC
Downstream 100 bases:
>100_bases GCGCTGAGGGGTTCGGCTGAGCGGTTCAATTTCCCGCAACAAGAAAGCCGGTGCATGCACCGGCTTTCTTTATGGCATTG ACCCCTGATGGCGCTATGCC
Product: heat shock protein HtpX
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 291; Mature: 291
Protein sequence:
>291_residues MKRIFLFILTNIAVVAVLGIVASLLGVNRFLTANGLNLSALLGFALIMGFGGAIISLLISKPVAKWSAGVRIINDAQNAD EAWIVETVRKLADKAQIGMPEVGIFEGAPNAFATGAFKNSSLVAVSTGLLQGMTREEIEAVIGHEIAHVANGDMVTMTLI QGVMNTFVVFLSRVIGYAVDSFLRRGSDNNSGPGIGYYVSTIVLDIVLGFAAAIVVAWFSRHREFRADAGSAQLLGRKQP MMNALARLGGMQPGELPKAVEAMGITGGIGKWFATHPPIEERIAALQNAPA
Sequences:
>Translated_291_residues MKRIFLFILTNIAVVAVLGIVASLLGVNRFLTANGLNLSALLGFALIMGFGGAIISLLISKPVAKWSAGVRIINDAQNAD EAWIVETVRKLADKAQIGMPEVGIFEGAPNAFATGAFKNSSLVAVSTGLLQGMTREEIEAVIGHEIAHVANGDMVTMTLI QGVMNTFVVFLSRVIGYAVDSFLRRGSDNNSGPGIGYYVSTIVLDIVLGFAAAIVVAWFSRHREFRADAGSAQLLGRKQP MMNALARLGGMQPGELPKAVEAMGITGGIGKWFATHPPIEERIAALQNAPA >Mature_291_residues MKRIFLFILTNIAVVAVLGIVASLLGVNRFLTANGLNLSALLGFALIMGFGGAIISLLISKPVAKWSAGVRIINDAQNAD EAWIVETVRKLADKAQIGMPEVGIFEGAPNAFATGAFKNSSLVAVSTGLLQGMTREEIEAVIGHEIAHVANGDMVTMTLI QGVMNTFVVFLSRVIGYAVDSFLRRGSDNNSGPGIGYYVSTIVLDIVLGFAAAIVVAWFSRHREFRADAGSAQLLGRKQP MMNALARLGGMQPGELPKAVEAMGITGGIGKWFATHPPIEERIAALQNAPA
Specific function: Unknown Function. Overexpression Of A Truncated Form Of The Htpx Protein Leads To An Increase In The Degradation Of Abnormal Proteins. [C]
COG id: COG0501
COG function: function code O; Zn-dependent protease with chaperone function
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase M48B family [H]
Homologues:
Organism=Escherichia coli, GI1788133, Length=297, Percent_Identity=48.1481481481481, Blast_Score=249, Evalue=2e-67,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR022919 - InterPro: IPR001915 [H]
Pfam domain/function: PF01435 Peptidase_M48 [H]
EC number: 3.4.24.-
Molecular weight: Translated: 30790; Mature: 30790
Theoretical pI: Translated: 9.53; Mature: 9.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRIFLFILTNIAVVAVLGIVASLLGVNRFLTANGLNLSALLGFALIMGFGGAIISLLIS CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH KPVAKWSAGVRIINDAQNADEAWIVETVRKLADKAQIGMPEVGIFEGAPNAFATGAFKNS HHHHHHHCCCEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC SLVAVSTGLLQGMTREEIEAVIGHEIAHVANGDMVTMTLIQGVMNTFVVFLSRVIGYAVD CEEEEHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH SFLRRGSDNNSGPGIGYYVSTIVLDIVLGFAAAIVVAWFSRHREFRADAGSAQLLGRKQP HHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCH MMNALARLGGMQPGELPKAVEAMGITGGIGKWFATHPPIEERIAALQNAPA HHHHHHHHCCCCCCCCHHHHHHHCCCCCCHHHHCCCCCHHHHHHHHHCCCC >Mature Secondary Structure MKRIFLFILTNIAVVAVLGIVASLLGVNRFLTANGLNLSALLGFALIMGFGGAIISLLIS CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH KPVAKWSAGVRIINDAQNADEAWIVETVRKLADKAQIGMPEVGIFEGAPNAFATGAFKNS HHHHHHHCCCEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC SLVAVSTGLLQGMTREEIEAVIGHEIAHVANGDMVTMTLIQGVMNTFVVFLSRVIGYAVD CEEEEHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH SFLRRGSDNNSGPGIGYYVSTIVLDIVLGFAAAIVVAWFSRHREFRADAGSAQLLGRKQP HHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCH MMNALARLGGMQPGELPKAVEAMGITGGIGKWFATHPPIEERIAALQNAPA HHHHHHHHCCCCCCCCHHHHHHHCCCCCCHHHHCCCCCHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: Zn [C]
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA