Definition | Polaromonas sp. JS666 chromosome, complete genome. |
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Accession | NC_007948 |
Length | 5,200,264 |
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The map label for this gene is 91786894
Identifier: 91786894
GI number: 91786894
Start: 1010596
End: 1011771
Strand: Direct
Name: 91786894
Synonym: Bpro_0994
Alternate gene names: NA
Gene position: 1010596-1011771 (Clockwise)
Preceding gene: 91786893
Following gene: 91786895
Centisome position: 19.43
GC content: 59.27
Gene sequence:
>1176_bases ATGAAAAAACATGCGATTCAATGCCTGGCCGGCGCAGGCCTCATGCTCTCGCTGGCCACGGGCTGGACGCAGACGACACC GATAAAGATCGGCTTCATGGGGGAGCTGTCAGGCCCCACGGCCGGCGTAGGCCAGGACCAGCTCGACGGTTTCAATTTGC TGCTCGAGCGCAACGGCGGCAAGCTGGGCGGCGTGCCGGTGCAACTGGTCAAGGAAGACAGCCAGCTCAAGCCGGACGTG GCCAACCAGGCCGCGCGTCGCCTCATTGAAAAAGAAAACGTGCCCATCATCACCGGCGTGTCTTTCTCCAACATCATGAT GGCCGTGCACAAGTACGTGACCGATAAGGAGGTCTTCCTGGTTGGATCGAATGCGGGTCCGTCGCAGATCGCTGGCAGCC AGTGCTCACCTTACCAGTTCATCACCTCCTGGCAGGGTGACCAGGCGGCTGAGGCCGTGGGCCAGTACGCAAAAGACAAG GGCTATAAAAAAGTCTTTGTGCTGGCGCCCAATTACCAGGCAGGCAAGGACATCGTTGCGGGCTTCAAGCGCTATTACAA GGGGCCGCTGGCAGACGAGGTCTACACCTCGCTGACGCAGATGGACTTTTCGGCCGAGCTGTCGCAGGTCTCCGCAGTCA GGCCTGATGCGGTATTTGCATTCTTCCCCGGTGGTCTGGGCGTGGCGTTTGCCAAGCAGTACGCCCAAGCCGGCATGTCG AAGAACCTGCCTTTGCTGTCGACCTTCATTGCCGACGCGCTGTCGCTGCCGGCCATTGGCGATTCGGCCATCGGGATCGT GAGCGGCGGCTTTTGGGCGCCTGACTTCCAGAATGCTCAGAGCAAACAGTTCGTCGAGGAATTCGAGCGCAAGTACAAAC GCATACCTTCGAACTACGCAGCGCAGAGCTATGACGCAGCCCAGCTACTGGACTCGGCCATCGGCAAGGTCAAGGGTAAT GTCACCGACAAGAAGGCATTCATGGCCGCGCTGAAAGCGGCCGATTTCAAGTCACTGCGGGGCGACTTCAGGTTTGGCAA CAACAACTTTCCCATACAGGGCATGCACATCATGGAAGTGGCCAGGGATGGCAGCGGCCGCCTGAACCTGAAGTCGGTTT CCACGCCGTTCAAGAGCTACCAGGATGCCTACGCGTCCCAATGTCCCCTGAAGTGA
Upstream 100 bases:
>100_bases CGCCGCCATCGAGACACCAGCGGTGCCCATCAAGGTGGTTCGAGCCGCACCCGCGAGCGTTTGAAACCACCATTTCACGA ATTCATACACGGAGACAACC
Downstream 100 bases:
>100_bases TGTGCAGGTCATGAGTGCCAATGAGATTGCTGTAAAAGTCGCGAGGAAGGTTCGCGAGGCGCAGGACATCAATTCCTATG AATTGGTGTCCGTCAATGGG
Product: extracellular ligand-binding receptor
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 391; Mature: 391
Protein sequence:
>391_residues MKKHAIQCLAGAGLMLSLATGWTQTTPIKIGFMGELSGPTAGVGQDQLDGFNLLLERNGGKLGGVPVQLVKEDSQLKPDV ANQAARRLIEKENVPIITGVSFSNIMMAVHKYVTDKEVFLVGSNAGPSQIAGSQCSPYQFITSWQGDQAAEAVGQYAKDK GYKKVFVLAPNYQAGKDIVAGFKRYYKGPLADEVYTSLTQMDFSAELSQVSAVRPDAVFAFFPGGLGVAFAKQYAQAGMS KNLPLLSTFIADALSLPAIGDSAIGIVSGGFWAPDFQNAQSKQFVEEFERKYKRIPSNYAAQSYDAAQLLDSAIGKVKGN VTDKKAFMAALKAADFKSLRGDFRFGNNNFPIQGMHIMEVARDGSGRLNLKSVSTPFKSYQDAYASQCPLK
Sequences:
>Translated_391_residues MKKHAIQCLAGAGLMLSLATGWTQTTPIKIGFMGELSGPTAGVGQDQLDGFNLLLERNGGKLGGVPVQLVKEDSQLKPDV ANQAARRLIEKENVPIITGVSFSNIMMAVHKYVTDKEVFLVGSNAGPSQIAGSQCSPYQFITSWQGDQAAEAVGQYAKDK GYKKVFVLAPNYQAGKDIVAGFKRYYKGPLADEVYTSLTQMDFSAELSQVSAVRPDAVFAFFPGGLGVAFAKQYAQAGMS KNLPLLSTFIADALSLPAIGDSAIGIVSGGFWAPDFQNAQSKQFVEEFERKYKRIPSNYAAQSYDAAQLLDSAIGKVKGN VTDKKAFMAALKAADFKSLRGDFRFGNNNFPIQGMHIMEVARDGSGRLNLKSVSTPFKSYQDAYASQCPLK >Mature_391_residues MKKHAIQCLAGAGLMLSLATGWTQTTPIKIGFMGELSGPTAGVGQDQLDGFNLLLERNGGKLGGVPVQLVKEDSQLKPDV ANQAARRLIEKENVPIITGVSFSNIMMAVHKYVTDKEVFLVGSNAGPSQIAGSQCSPYQFITSWQGDQAAEAVGQYAKDK GYKKVFVLAPNYQAGKDIVAGFKRYYKGPLADEVYTSLTQMDFSAELSQVSAVRPDAVFAFFPGGLGVAFAKQYAQAGMS KNLPLLSTFIADALSLPAIGDSAIGIVSGGFWAPDFQNAQSKQFVEEFERKYKRIPSNYAAQSYDAAQLLDSAIGKVKGN VTDKKAFMAALKAADFKSLRGDFRFGNNNFPIQGMHIMEVARDGSGRLNLKSVSTPFKSYQDAYASQCPLK
Specific function: Component of an amino-acid transport system (Potential) [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the leucine-binding protein family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001828 - InterPro: IPR000709 [H]
Pfam domain/function: PF01094 ANF_receptor [H]
EC number: NA
Molecular weight: Translated: 42129; Mature: 42129
Theoretical pI: Translated: 9.40; Mature: 9.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKHAIQCLAGAGLMLSLATGWTQTTPIKIGFMGELSGPTAGVGQDQLDGFNLLLERNGG CCCHHHHHHHCCCEEEEEECCCCCCCCEEEEEEECCCCCCCCCCCHHCCCEEEEEECCCC KLGGVPVQLVKEDSQLKPDVANQAARRLIEKENVPIITGVSFSNIMMAVHKYVTDKEVFL EECCCCCEEECCCCCCCCHHHHHHHHHHHHHCCCCEEECCCHHHHHHHHHHHCCCCEEEE VGSNAGPSQIAGSQCSPYQFITSWQGDQAAEAVGQYAKDKGYKKVFVLAPNYQAGKDIVA EECCCCHHHCCCCCCCCHHHHHCCCCCHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHH GFKRYYKGPLADEVYTSLTQMDFSAELSQVSAVRPDAVFAFFPGGLGVAFAKQYAQAGMS HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHCCCC KNLPLLSTFIADALSLPAIGDSAIGIVSGGFWAPDFQNAQSKQFVEEFERKYKRIPSNYA CCCHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHH AQSYDAAQLLDSAIGKVKGNVTDKKAFMAALKAADFKSLRGDFRFGNNNFPIQGMHIMEV HCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCHHEEH ARDGSGRLNLKSVSTPFKSYQDAYASQCPLK HCCCCCEEEEHHCCCCHHHHHHHHHHCCCCC >Mature Secondary Structure MKKHAIQCLAGAGLMLSLATGWTQTTPIKIGFMGELSGPTAGVGQDQLDGFNLLLERNGG CCCHHHHHHHCCCEEEEEECCCCCCCCEEEEEEECCCCCCCCCCCHHCCCEEEEEECCCC KLGGVPVQLVKEDSQLKPDVANQAARRLIEKENVPIITGVSFSNIMMAVHKYVTDKEVFL EECCCCCEEECCCCCCCCHHHHHHHHHHHHHCCCCEEECCCHHHHHHHHHHHCCCCEEEE VGSNAGPSQIAGSQCSPYQFITSWQGDQAAEAVGQYAKDKGYKKVFVLAPNYQAGKDIVA EECCCCHHHCCCCCCCCHHHHHCCCCCHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHH GFKRYYKGPLADEVYTSLTQMDFSAELSQVSAVRPDAVFAFFPGGLGVAFAKQYAQAGMS HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHCCCC KNLPLLSTFIADALSLPAIGDSAIGIVSGGFWAPDFQNAQSKQFVEEFERKYKRIPSNYA CCCHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHH AQSYDAAQLLDSAIGKVKGNVTDKKAFMAALKAADFKSLRGDFRFGNNNFPIQGMHIMEV HCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCHHEEH ARDGSGRLNLKSVSTPFKSYQDAYASQCPLK HCCCCCEEEEHHCCCCHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA