Definition | Polaromonas sp. JS666 chromosome, complete genome. |
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Accession | NC_007948 |
Length | 5,200,264 |
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The map label for this gene is vanA [H]
Identifier: 91786893
GI number: 91786893
Start: 1009507
End: 1010559
Strand: Direct
Name: vanA [H]
Synonym: Bpro_0993
Alternate gene names: 91786893
Gene position: 1009507-1010559 (Clockwise)
Preceding gene: 91786891
Following gene: 91786894
Centisome position: 19.41
GC content: 61.35
Gene sequence:
>1053_bases GTGGCCTGCTGGGGCAACGAAGTCAAGTCCGGTGAGATGTTTCATCGCAAACTGCTCAATGAAATGGTGGTCTTTTACCG CAAGGAAGACGGTACGGCCGTCGCGTTGCAAGACCGTTGTCCGCATCGCTTCATTCCGCTTCACCTGGGGAAAATCGTCG GGGATTCCATCGAATGTGCCTACCACGGCCTTACCTTCGACTGTTCGGGCAAGTGCGTGAAGAACCCGCACGGCGATGGC AAGGTGCCAGCGGCAGCCAGGGTGCGCTCTTACCCGGTGGCCGAAAAGCACGGCATGCTGTGGATCTGGATGGGCAGCCA GGCCGCGGATCCCGTGACCATTCCCGACTACAGCGTGCTCGAGTCCGAAGCTGGCTTTGCCACCAGCCGTGGCTACCTCC ACATCGAGGCCAACTACGAGCTGATGGGCGAAAACCTGCTTGACCTGAGCCACATCACCTATCTGCATGACGGCTATCTC GGCAGCCCCGAACAGGTTGGCGCAGACCAGGTGCTCAAGGAGGAGGGCGGCAAGATCCATTGCGACCGCTGGATGCCCAA CATTTCGGTCCCCCCCATCTTCGACATGGTGTATCGCCGCGACGGCAAGCCGGTGGACATGTGGACCCACATGACCTGGA TTCCGCCAAGCTGCTTTCTGTTGGACTCCGGCGTGCATGAAGTGGGCGGCAAGCGCGAGGACCACGGCTGGTATTACGGC GTGCACATCCTCACGCCCGAGTCGGAGAAAACGGTGCACTACCACTTCGCTGCCGCGATGCCTCCGGGCACCAGGATGAC GCCCGATGAGACCGCGAAGTTTTCCGCCTTGCGCCGTCACGCATTTGAGGCCCAGGACAAACCCATCATCAACGCACAAC AGGCGGCCATTGGCGACAACGACTTCTGGGAGATGAAGCCGGTGCTGTTGAGCGTGGATGCGGGCCCGGTGCGCATGCGC CGGGCCATCGAACGCATGACCAAAGAGGACGCCGCCATCGAGACACCAGCGGTGCCCATCAAGGTGGTTCGAGCCGCACC CGCGAGCGTTTGA
Upstream 100 bases:
>100_bases AAATTCTTCTCGTTAACTTACAAACCGTGCGCTCGGTATGTGAAAATTCAGTCTGAAATTATTCTTTAACAAGGAAGCCT TCATCAAAAATGCCTGGTAC
Downstream 100 bases:
>100_bases AACCACCATTTCACGAATTCATACACGGAGACAACCATGAAAAAACATGCGATTCAATGCCTGGCCGGCGCAGGCCTCAT GCTCTCGCTGGCCACGGGCT
Product: Rieske (2Fe-2S) domain-containing protein
Products: NA
Alternate protein names: 4-hydroxy-3-methoxybenzoate demethylase [H]
Number of amino acids: Translated: 350; Mature: 349
Protein sequence:
>350_residues MACWGNEVKSGEMFHRKLLNEMVVFYRKEDGTAVALQDRCPHRFIPLHLGKIVGDSIECAYHGLTFDCSGKCVKNPHGDG KVPAAARVRSYPVAEKHGMLWIWMGSQAADPVTIPDYSVLESEAGFATSRGYLHIEANYELMGENLLDLSHITYLHDGYL GSPEQVGADQVLKEEGGKIHCDRWMPNISVPPIFDMVYRRDGKPVDMWTHMTWIPPSCFLLDSGVHEVGGKREDHGWYYG VHILTPESEKTVHYHFAAAMPPGTRMTPDETAKFSALRRHAFEAQDKPIINAQQAAIGDNDFWEMKPVLLSVDAGPVRMR RAIERMTKEDAAIETPAVPIKVVRAAPASV
Sequences:
>Translated_350_residues MACWGNEVKSGEMFHRKLLNEMVVFYRKEDGTAVALQDRCPHRFIPLHLGKIVGDSIECAYHGLTFDCSGKCVKNPHGDG KVPAAARVRSYPVAEKHGMLWIWMGSQAADPVTIPDYSVLESEAGFATSRGYLHIEANYELMGENLLDLSHITYLHDGYL GSPEQVGADQVLKEEGGKIHCDRWMPNISVPPIFDMVYRRDGKPVDMWTHMTWIPPSCFLLDSGVHEVGGKREDHGWYYG VHILTPESEKTVHYHFAAAMPPGTRMTPDETAKFSALRRHAFEAQDKPIINAQQAAIGDNDFWEMKPVLLSVDAGPVRMR RAIERMTKEDAAIETPAVPIKVVRAAPASV >Mature_349_residues ACWGNEVKSGEMFHRKLLNEMVVFYRKEDGTAVALQDRCPHRFIPLHLGKIVGDSIECAYHGLTFDCSGKCVKNPHGDGK VPAAARVRSYPVAEKHGMLWIWMGSQAADPVTIPDYSVLESEAGFATSRGYLHIEANYELMGENLLDLSHITYLHDGYLG SPEQVGADQVLKEEGGKIHCDRWMPNISVPPIFDMVYRRDGKPVDMWTHMTWIPPSCFLLDSGVHEVGGKREDHGWYYGV HILTPESEKTVHYHFAAAMPPGTRMTPDETAKFSALRRHAFEAQDKPIINAQQAAIGDNDFWEMKPVLLSVDAGPVRMRR AIERMTKEDAAIETPAVPIKVVRAAPASV
Specific function: Unknown
COG id: COG4638
COG function: function code PR; Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 Rieske domain [H]
Homologues:
Organism=Caenorhabditis elegans, GI71983709, Length=174, Percent_Identity=24.7126436781609, Blast_Score=75, Evalue=7e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017941 - InterPro: IPR015881 [H]
Pfam domain/function: PF00355 Rieske [H]
EC number: =1.14.13.82 [H]
Molecular weight: Translated: 39123; Mature: 38992
Theoretical pI: Translated: 6.46; Mature: 6.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 6.3 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 6.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MACWGNEVKSGEMFHRKLLNEMVVFYRKEDGTAVALQDRCPHRFIPLHLGKIVGDSIECA CCCCCCCCCCHHHHHHHHHHHHEEEEECCCCCEEEEECCCCCEEEHHHHHHHHCCCEEEE YHGLTFDCSGKCVKNPHGDGKVPAAARVRSYPVAEKHGMLWIWMGSQAADPVTIPDYSVL ECCEEEECCCCEECCCCCCCCCCHHHHHHCCCCHHHCCEEEEEECCCCCCCEECCCHHHH ESEAGFATSRGYLHIEANYELMGENLLDLSHITYLHDGYLGSPEQVGADQVLKEEGGKIH HCCCCCEECCCEEEEEECCEECCCCHHHHHHHEEEECCCCCCHHHCCHHHHHHHCCCEEE CDRWMPNISVPPIFDMVYRRDGKPVDMWTHMTWIPPSCFLLDSGVHEVGGKREDHGWYYG ECCCCCCCCCCHHHHHHHHCCCCCEEEEEEEEECCCCEEEEECCHHHHCCCCCCCCEEEE VHILTPESEKTVHYHFAAAMPPGTRMTPDETAKFSALRRHAFEAQDKPIINAQQAAIGDN EEEECCCCCCEEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHCCCCC DFWEMKPVLLSVDAGPVRMRRAIERMTKEDAAIETPAVPIKVVRAAPASV CCEEECEEEEEECCCHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCC >Mature Secondary Structure ACWGNEVKSGEMFHRKLLNEMVVFYRKEDGTAVALQDRCPHRFIPLHLGKIVGDSIECA CCCCCCCCCHHHHHHHHHHHHEEEEECCCCCEEEEECCCCCEEEHHHHHHHHCCCEEEE YHGLTFDCSGKCVKNPHGDGKVPAAARVRSYPVAEKHGMLWIWMGSQAADPVTIPDYSVL ECCEEEECCCCEECCCCCCCCCCHHHHHHCCCCHHHCCEEEEEECCCCCCCEECCCHHHH ESEAGFATSRGYLHIEANYELMGENLLDLSHITYLHDGYLGSPEQVGADQVLKEEGGKIH HCCCCCEECCCEEEEEECCEECCCCHHHHHHHEEEECCCCCCHHHCCHHHHHHHCCCEEE CDRWMPNISVPPIFDMVYRRDGKPVDMWTHMTWIPPSCFLLDSGVHEVGGKREDHGWYYG ECCCCCCCCCCHHHHHHHHCCCCCEEEEEEEEECCCCEEEEECCHHHHCCCCCCCCEEEE VHILTPESEKTVHYHFAAAMPPGTRMTPDETAKFSALRRHAFEAQDKPIINAQQAAIGDN EEEECCCCCCEEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHCCCCC DFWEMKPVLLSVDAGPVRMRRAIERMTKEDAAIETPAVPIKVVRAAPASV CCEEECEEEEEECCCHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 3170489 [H]