Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

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The map label for this gene is 91786894

Identifier: 91786894

GI number: 91786894

Start: 1010596

End: 1011771

Strand: Direct

Name: 91786894

Synonym: Bpro_0994

Alternate gene names: NA

Gene position: 1010596-1011771 (Clockwise)

Preceding gene: 91786893

Following gene: 91786895

Centisome position: 19.43

GC content: 59.27

Gene sequence:

>1176_bases
ATGAAAAAACATGCGATTCAATGCCTGGCCGGCGCAGGCCTCATGCTCTCGCTGGCCACGGGCTGGACGCAGACGACACC
GATAAAGATCGGCTTCATGGGGGAGCTGTCAGGCCCCACGGCCGGCGTAGGCCAGGACCAGCTCGACGGTTTCAATTTGC
TGCTCGAGCGCAACGGCGGCAAGCTGGGCGGCGTGCCGGTGCAACTGGTCAAGGAAGACAGCCAGCTCAAGCCGGACGTG
GCCAACCAGGCCGCGCGTCGCCTCATTGAAAAAGAAAACGTGCCCATCATCACCGGCGTGTCTTTCTCCAACATCATGAT
GGCCGTGCACAAGTACGTGACCGATAAGGAGGTCTTCCTGGTTGGATCGAATGCGGGTCCGTCGCAGATCGCTGGCAGCC
AGTGCTCACCTTACCAGTTCATCACCTCCTGGCAGGGTGACCAGGCGGCTGAGGCCGTGGGCCAGTACGCAAAAGACAAG
GGCTATAAAAAAGTCTTTGTGCTGGCGCCCAATTACCAGGCAGGCAAGGACATCGTTGCGGGCTTCAAGCGCTATTACAA
GGGGCCGCTGGCAGACGAGGTCTACACCTCGCTGACGCAGATGGACTTTTCGGCCGAGCTGTCGCAGGTCTCCGCAGTCA
GGCCTGATGCGGTATTTGCATTCTTCCCCGGTGGTCTGGGCGTGGCGTTTGCCAAGCAGTACGCCCAAGCCGGCATGTCG
AAGAACCTGCCTTTGCTGTCGACCTTCATTGCCGACGCGCTGTCGCTGCCGGCCATTGGCGATTCGGCCATCGGGATCGT
GAGCGGCGGCTTTTGGGCGCCTGACTTCCAGAATGCTCAGAGCAAACAGTTCGTCGAGGAATTCGAGCGCAAGTACAAAC
GCATACCTTCGAACTACGCAGCGCAGAGCTATGACGCAGCCCAGCTACTGGACTCGGCCATCGGCAAGGTCAAGGGTAAT
GTCACCGACAAGAAGGCATTCATGGCCGCGCTGAAAGCGGCCGATTTCAAGTCACTGCGGGGCGACTTCAGGTTTGGCAA
CAACAACTTTCCCATACAGGGCATGCACATCATGGAAGTGGCCAGGGATGGCAGCGGCCGCCTGAACCTGAAGTCGGTTT
CCACGCCGTTCAAGAGCTACCAGGATGCCTACGCGTCCCAATGTCCCCTGAAGTGA

Upstream 100 bases:

>100_bases
CGCCGCCATCGAGACACCAGCGGTGCCCATCAAGGTGGTTCGAGCCGCACCCGCGAGCGTTTGAAACCACCATTTCACGA
ATTCATACACGGAGACAACC

Downstream 100 bases:

>100_bases
TGTGCAGGTCATGAGTGCCAATGAGATTGCTGTAAAAGTCGCGAGGAAGGTTCGCGAGGCGCAGGACATCAATTCCTATG
AATTGGTGTCCGTCAATGGG

Product: extracellular ligand-binding receptor

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 391; Mature: 391

Protein sequence:

>391_residues
MKKHAIQCLAGAGLMLSLATGWTQTTPIKIGFMGELSGPTAGVGQDQLDGFNLLLERNGGKLGGVPVQLVKEDSQLKPDV
ANQAARRLIEKENVPIITGVSFSNIMMAVHKYVTDKEVFLVGSNAGPSQIAGSQCSPYQFITSWQGDQAAEAVGQYAKDK
GYKKVFVLAPNYQAGKDIVAGFKRYYKGPLADEVYTSLTQMDFSAELSQVSAVRPDAVFAFFPGGLGVAFAKQYAQAGMS
KNLPLLSTFIADALSLPAIGDSAIGIVSGGFWAPDFQNAQSKQFVEEFERKYKRIPSNYAAQSYDAAQLLDSAIGKVKGN
VTDKKAFMAALKAADFKSLRGDFRFGNNNFPIQGMHIMEVARDGSGRLNLKSVSTPFKSYQDAYASQCPLK

Sequences:

>Translated_391_residues
MKKHAIQCLAGAGLMLSLATGWTQTTPIKIGFMGELSGPTAGVGQDQLDGFNLLLERNGGKLGGVPVQLVKEDSQLKPDV
ANQAARRLIEKENVPIITGVSFSNIMMAVHKYVTDKEVFLVGSNAGPSQIAGSQCSPYQFITSWQGDQAAEAVGQYAKDK
GYKKVFVLAPNYQAGKDIVAGFKRYYKGPLADEVYTSLTQMDFSAELSQVSAVRPDAVFAFFPGGLGVAFAKQYAQAGMS
KNLPLLSTFIADALSLPAIGDSAIGIVSGGFWAPDFQNAQSKQFVEEFERKYKRIPSNYAAQSYDAAQLLDSAIGKVKGN
VTDKKAFMAALKAADFKSLRGDFRFGNNNFPIQGMHIMEVARDGSGRLNLKSVSTPFKSYQDAYASQCPLK
>Mature_391_residues
MKKHAIQCLAGAGLMLSLATGWTQTTPIKIGFMGELSGPTAGVGQDQLDGFNLLLERNGGKLGGVPVQLVKEDSQLKPDV
ANQAARRLIEKENVPIITGVSFSNIMMAVHKYVTDKEVFLVGSNAGPSQIAGSQCSPYQFITSWQGDQAAEAVGQYAKDK
GYKKVFVLAPNYQAGKDIVAGFKRYYKGPLADEVYTSLTQMDFSAELSQVSAVRPDAVFAFFPGGLGVAFAKQYAQAGMS
KNLPLLSTFIADALSLPAIGDSAIGIVSGGFWAPDFQNAQSKQFVEEFERKYKRIPSNYAAQSYDAAQLLDSAIGKVKGN
VTDKKAFMAALKAADFKSLRGDFRFGNNNFPIQGMHIMEVARDGSGRLNLKSVSTPFKSYQDAYASQCPLK

Specific function: Component of an amino-acid transport system (Potential) [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the leucine-binding protein family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001828
- InterPro:   IPR000709 [H]

Pfam domain/function: PF01094 ANF_receptor [H]

EC number: NA

Molecular weight: Translated: 42129; Mature: 42129

Theoretical pI: Translated: 9.40; Mature: 9.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKHAIQCLAGAGLMLSLATGWTQTTPIKIGFMGELSGPTAGVGQDQLDGFNLLLERNGG
CCCHHHHHHHCCCEEEEEECCCCCCCCEEEEEEECCCCCCCCCCCHHCCCEEEEEECCCC
KLGGVPVQLVKEDSQLKPDVANQAARRLIEKENVPIITGVSFSNIMMAVHKYVTDKEVFL
EECCCCCEEECCCCCCCCHHHHHHHHHHHHHCCCCEEECCCHHHHHHHHHHHCCCCEEEE
VGSNAGPSQIAGSQCSPYQFITSWQGDQAAEAVGQYAKDKGYKKVFVLAPNYQAGKDIVA
EECCCCHHHCCCCCCCCHHHHHCCCCCHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHH
GFKRYYKGPLADEVYTSLTQMDFSAELSQVSAVRPDAVFAFFPGGLGVAFAKQYAQAGMS
HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHCCCC
KNLPLLSTFIADALSLPAIGDSAIGIVSGGFWAPDFQNAQSKQFVEEFERKYKRIPSNYA
CCCHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHH
AQSYDAAQLLDSAIGKVKGNVTDKKAFMAALKAADFKSLRGDFRFGNNNFPIQGMHIMEV
HCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCHHEEH
ARDGSGRLNLKSVSTPFKSYQDAYASQCPLK
HCCCCCEEEEHHCCCCHHHHHHHHHHCCCCC
>Mature Secondary Structure
MKKHAIQCLAGAGLMLSLATGWTQTTPIKIGFMGELSGPTAGVGQDQLDGFNLLLERNGG
CCCHHHHHHHCCCEEEEEECCCCCCCCEEEEEEECCCCCCCCCCCHHCCCEEEEEECCCC
KLGGVPVQLVKEDSQLKPDVANQAARRLIEKENVPIITGVSFSNIMMAVHKYVTDKEVFL
EECCCCCEEECCCCCCCCHHHHHHHHHHHHHCCCCEEECCCHHHHHHHHHHHCCCCEEEE
VGSNAGPSQIAGSQCSPYQFITSWQGDQAAEAVGQYAKDKGYKKVFVLAPNYQAGKDIVA
EECCCCHHHCCCCCCCCHHHHHCCCCCHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHH
GFKRYYKGPLADEVYTSLTQMDFSAELSQVSAVRPDAVFAFFPGGLGVAFAKQYAQAGMS
HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHCCCC
KNLPLLSTFIADALSLPAIGDSAIGIVSGGFWAPDFQNAQSKQFVEEFERKYKRIPSNYA
CCCHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHH
AQSYDAAQLLDSAIGKVKGNVTDKKAFMAALKAADFKSLRGDFRFGNNNFPIQGMHIMEV
HCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCHHEEH
ARDGSGRLNLKSVSTPFKSYQDAYASQCPLK
HCCCCCEEEEHHCCCCHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA