Definition | Polaromonas sp. JS666 chromosome, complete genome. |
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Accession | NC_007948 |
Length | 5,200,264 |
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The map label for this gene is ispH
Identifier: 91786853
GI number: 91786853
Start: 973754
End: 974755
Strand: Direct
Name: ispH
Synonym: Bpro_0951
Alternate gene names: 91786853
Gene position: 973754-974755 (Clockwise)
Preceding gene: 91786852
Following gene: 91786854
Centisome position: 18.73
GC content: 64.27
Gene sequence:
>1002_bases ATGAATACCGCAGACAAACGGCTTGACGAAATCCTGCTCGCGGAGCCGCGCGGCTTTTGCGCCGGTGTCGACCGGGCCAT TGAAATCGTCGAGCGGGCGCTCACCAAGTTTGGCGCACCGATCTACGTGCGCCACGAAATCGTGCACAACACCTATGTGG TCAACGAGCTCAAGGCCAAGGGCGCGATCTTTATCGAAGAGCTGTCCGACGTGCCGCCGGGCGCCACGCTGGTGTTCAGC GCCCATGGCGTGAGCAAGGCCATCCAGGACGAGGCGCGCGCCCGCGGCTTCCAGATTTTTGATGCCACCTGCCCGCTGGT GACCAAGGTGCACGTCGAAGTGGCCAAGCTGCACAAGGAAGGTTACGAGTTCATCATGATCGGCCACAAGGGCCACCCCG AGGTGGAGGGCACCATGGGCCAGCTCGACAGCGGCATCCACCTGGTGGAAGACGTGGCCGACGTGGCACGCATTACGCCC TCGCAAACCGAGCGGCTGGCCGTGGTGACGCAAACCACGCTGAGCGTGGATGACGCGGCCGAGATCAGCGCGGCCGTGAA GGCGCGCTTTCCGCAGGTGCGCGAGCCCAAGCAGCAGGACATTTGCTACGCCACGCAAAACCGGCAGGACGCCGTCAAGG TGCTCAGCCCGCAGGTGGACATCCTGATCGTGGTTGGCAGCCCGACAAGTTCGAACAGCAACCGTCTGCGCGAGCTGGCC GCCAAGCTGGGCACTGAGGCCTACATGGTGGACGATGCCAGCGAGCTGCGGGAGTCCTGGTTCGAGGGCAAGAGCCGCGT CGGTCTGACGGCCGGCGCCTCGGCCCCGGAGATCCTCGTCAAGCAGGTGATAGACCGCATCCGGGCGCTGGGCGCGGTCT CCGTGCGCAAGATGGACGGCATCGAGGAAACCATCAAGTTTCCGCTGCCCAAGGGCCTGAAGGTCGATGCCCAGGGCCAC ATGCTGGACGTCGGCGACAGCCAGCTTCATCAATTGACCTGA
Upstream 100 bases:
>100_bases TTCAGCAGGTCAAGGAGGGCGGCGATGCCGTGCAGTTCGACTTCAACCACCCGCTGGCCGGCCAGCCGGTGGTGTTTGAA GTGCAAGTGATTGGCGTTTT
Downstream 100 bases:
>100_bases CGCCGGCCATGACCAACCGCCATCAAATCGAGAACTGCCTGGGCGCGTTCAATCAGGATTACCGCCACTTTATTCGTCAA ACGCCGCTGTGGAAACTGCC
Product: 4-hydroxy-3-methylbut-2-enyl diphosphate reductase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 333; Mature: 333
Protein sequence:
>333_residues MNTADKRLDEILLAEPRGFCAGVDRAIEIVERALTKFGAPIYVRHEIVHNTYVVNELKAKGAIFIEELSDVPPGATLVFS AHGVSKAIQDEARARGFQIFDATCPLVTKVHVEVAKLHKEGYEFIMIGHKGHPEVEGTMGQLDSGIHLVEDVADVARITP SQTERLAVVTQTTLSVDDAAEISAAVKARFPQVREPKQQDICYATQNRQDAVKVLSPQVDILIVVGSPTSSNSNRLRELA AKLGTEAYMVDDASELRESWFEGKSRVGLTAGASAPEILVKQVIDRIRALGAVSVRKMDGIEETIKFPLPKGLKVDAQGH MLDVGDSQLHQLT
Sequences:
>Translated_333_residues MNTADKRLDEILLAEPRGFCAGVDRAIEIVERALTKFGAPIYVRHEIVHNTYVVNELKAKGAIFIEELSDVPPGATLVFS AHGVSKAIQDEARARGFQIFDATCPLVTKVHVEVAKLHKEGYEFIMIGHKGHPEVEGTMGQLDSGIHLVEDVADVARITP SQTERLAVVTQTTLSVDDAAEISAAVKARFPQVREPKQQDICYATQNRQDAVKVLSPQVDILIVVGSPTSSNSNRLRELA AKLGTEAYMVDDASELRESWFEGKSRVGLTAGASAPEILVKQVIDRIRALGAVSVRKMDGIEETIKFPLPKGLKVDAQGH MLDVGDSQLHQLT >Mature_333_residues MNTADKRLDEILLAEPRGFCAGVDRAIEIVERALTKFGAPIYVRHEIVHNTYVVNELKAKGAIFIEELSDVPPGATLVFS AHGVSKAIQDEARARGFQIFDATCPLVTKVHVEVAKLHKEGYEFIMIGHKGHPEVEGTMGQLDSGIHLVEDVADVARITP SQTERLAVVTQTTLSVDDAAEISAAVKARFPQVREPKQQDICYATQNRQDAVKVLSPQVDILIVVGSPTSSNSNRLRELA AKLGTEAYMVDDASELRESWFEGKSRVGLTAGASAPEILVKQVIDRIRALGAVSVRKMDGIEETIKFPLPKGLKVDAQGH MLDVGDSQLHQLT
Specific function: Converts 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate into isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP)
COG id: COG0761
COG function: function code IM; Penicillin tolerance protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ispH family
Homologues:
Organism=Escherichia coli, GI1786212, Length=310, Percent_Identity=56.4516129032258, Blast_Score=372, Evalue=1e-104,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): ISPH_POLSJ (Q12EY5)
Other databases:
- EMBL: CP000316 - RefSeq: YP_547805.1 - STRING: Q12EY5 - GeneID: 4011085 - GenomeReviews: CP000316_GR - KEGG: pol:Bpro_0951 - NMPDR: fig|296591.1.peg.2986 - eggNOG: COG0761 - HOGENOM: HBG335228 - OMA: HMQVARA - PhylomeDB: Q12EY5 - ProtClustDB: PRK01045 - BioCyc: PSP296591:BPRO_0951-MONOMER - HAMAP: MF_00191 - InterPro: IPR003451 - TIGRFAMs: TIGR00216
Pfam domain/function: PF02401 LYTB
EC number: =1.17.1.2
Molecular weight: Translated: 36305; Mature: 36305
Theoretical pI: Translated: 5.82; Mature: 5.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNTADKRLDEILLAEPRGFCAGVDRAIEIVERALTKFGAPIYVRHEIVHNTYVVNELKAK CCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHCC GAIFIEELSDVPPGATLVFSAHGVSKAIQDEARARGFQIFDATCPLVTKVHVEVAKLHKE CCEEEEHHHCCCCCCEEEEECCCHHHHHHHHHHHCCEEEEECCCCHHHHHHHHHHHHHHC GYEFIMIGHKGHPEVEGTMGQLDSGIHLVEDVADVARITPSQTERLAVVTQTTLSVDDAA CCEEEEECCCCCCCCCCHHHHHCCCHHHHHHHHHHHHCCCCCCCEEEEEEEEEECCCHHH EISAAVKARFPQVREPKQQDICYATQNRQDAVKVLSPQVDILIVVGSPTSSNSNRLRELA HHHHHHHHCCCCCCCCCHHCCEEECCCHHHHHHHHCCCEEEEEEECCCCCCCHHHHHHHH AKLGTEAYMVDDASELRESWFEGKSRVGLTAGASAPEILVKQVIDRIRALGAVSVRKMDG HHHCCCEEEECCHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCC IEETIKFPLPKGLKVDAQGHMLDVGDSQLHQLT HHHHHHCCCCCCCEECCCCCEEECCCHHHHHCC >Mature Secondary Structure MNTADKRLDEILLAEPRGFCAGVDRAIEIVERALTKFGAPIYVRHEIVHNTYVVNELKAK CCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHCC GAIFIEELSDVPPGATLVFSAHGVSKAIQDEARARGFQIFDATCPLVTKVHVEVAKLHKE CCEEEEHHHCCCCCCEEEEECCCHHHHHHHHHHHCCEEEEECCCCHHHHHHHHHHHHHHC GYEFIMIGHKGHPEVEGTMGQLDSGIHLVEDVADVARITPSQTERLAVVTQTTLSVDDAA CCEEEEECCCCCCCCCCHHHHHCCCHHHHHHHHHHHHCCCCCCCEEEEEEEEEECCCHHH EISAAVKARFPQVREPKQQDICYATQNRQDAVKVLSPQVDILIVVGSPTSSNSNRLRELA HHHHHHHHCCCCCCCCCHHCCEEECCCHHHHHHHHCCCEEEEEEECCCCCCCHHHHHHHH AKLGTEAYMVDDASELRESWFEGKSRVGLTAGASAPEILVKQVIDRIRALGAVSVRKMDG HHHCCCEEEECCHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCC IEETIKFPLPKGLKVDAQGHMLDVGDSQLHQLT HHHHHHCCCCCCCEECCCCCEEECCCHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA