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The map label for this gene is speE [H]

Identifier: 91786815

GI number: 91786815

Start: 930593

End: 931354

Strand: Direct

Name: speE [H]

Synonym: Bpro_0913

Alternate gene names: 91786815

Gene position: 930593-931354 (Clockwise)

Preceding gene: 91786814

Following gene: 91786817

Centisome position: 17.9

GC content: 59.06

Gene sequence:

>762_bases
ATGTCCAATACCTTCGACTTCGAGGCCCTGCAGCACGCGGAGCCCTTCGTGATAGAGACACCGGGTAGCCGGTCACTGCA
TTTCACCCGTCTGGAGATGCAAAGCCGGATGTGTCTCGACCAGCCCGACTGGCTGAGCCTGGAATACACGCGCTTGATGA
TGGGATTCCTGCTGTTCATGAGCCAGCCCGGGCATGTTGCCATCATCGGGTTGGGCGGTGGCTCGCTGGCCAAGTTCTGC
TACCGGCACCTGGCGGAATCGCGCATCACCGCGGTTGAGGTTAATCCGCACGTCCTCTCGCTGCGCGACAAGTTCCATGT
TCCGCCCGATGACGAGCGATTCTCCGTGATTCTGGGCGACGGAGCGGACTTCGTCAGGGCCGCTGAGGACTCGCTCGACA
CCTTGCTGGTAGACGGCTTTGTGGCTGAGGGGATTCCTCCCCAGCTGTCATCGCAGAGCTTCTACGATGACTGCTTTGCC
GCATTGCGCCGCGGCGGGATGGCGGTTTTTAACCTGGACGGCGATGATGGCGATTCCGAGCAACACATCGAAAGGATTGC
CCGAAGCTTTGACGCTCCAATCTTGCGAGTCAGCGCCGCTACCTGTACGAATGTCGTGGTTTTCGTGTGCAAAGGCGATC
TGATGCTCAACCATTCCATAGGTACGGAAGCATTGCCGCAAGATATGAAGTTCGACGTGCGCGCGCATCTCCTTCCGGCA
TTCAATCGCGTCCGTCTGGCGCTGAAAGACCAGCGGTGCTAG

Upstream 100 bases:

>100_bases
CTGACGCTTGGGTCCAACTGGCGCCCAGCATGTCGAGGGTCAAAGAGGCAGCCAGACGGCAACGTCCAGAAACCCCGCTG
CACTCGGTTTAACAGAAACG

Downstream 100 bases:

>100_bases
TGCCAATACGGTTCAGTCAAGTTATTCACCTTGAATCGGAATGTCGGAATGACCAAAACCTTGACTTGTCATGGCGGGCC
TGACCGCAATCCATGGCTCC

Product: spermidine synthase-like protein

Products: NA

Alternate protein names: Putrescine aminopropyltransferase; PAPT; SPDSY [H]

Number of amino acids: Translated: 253; Mature: 252

Protein sequence:

>253_residues
MSNTFDFEALQHAEPFVIETPGSRSLHFTRLEMQSRMCLDQPDWLSLEYTRLMMGFLLFMSQPGHVAIIGLGGGSLAKFC
YRHLAESRITAVEVNPHVLSLRDKFHVPPDDERFSVILGDGADFVRAAEDSLDTLLVDGFVAEGIPPQLSSQSFYDDCFA
ALRRGGMAVFNLDGDDGDSEQHIERIARSFDAPILRVSAATCTNVVVFVCKGDLMLNHSIGTEALPQDMKFDVRAHLLPA
FNRVRLALKDQRC

Sequences:

>Translated_253_residues
MSNTFDFEALQHAEPFVIETPGSRSLHFTRLEMQSRMCLDQPDWLSLEYTRLMMGFLLFMSQPGHVAIIGLGGGSLAKFC
YRHLAESRITAVEVNPHVLSLRDKFHVPPDDERFSVILGDGADFVRAAEDSLDTLLVDGFVAEGIPPQLSSQSFYDDCFA
ALRRGGMAVFNLDGDDGDSEQHIERIARSFDAPILRVSAATCTNVVVFVCKGDLMLNHSIGTEALPQDMKFDVRAHLLPA
FNRVRLALKDQRC
>Mature_252_residues
SNTFDFEALQHAEPFVIETPGSRSLHFTRLEMQSRMCLDQPDWLSLEYTRLMMGFLLFMSQPGHVAIIGLGGGSLAKFCY
RHLAESRITAVEVNPHVLSLRDKFHVPPDDERFSVILGDGADFVRAAEDSLDTLLVDGFVAEGIPPQLSSQSFYDDCFAA
LRRGGMAVFNLDGDDGDSEQHIERIARSFDAPILRVSAATCTNVVVFVCKGDLMLNHSIGTEALPQDMKFDVRAHLLPAF
NRVRLALKDQRC

Specific function: Catalyzes the production of spermidine from putrescine and decarboxylated S-adenosylmethionine (dcSAM), which serves as an aminopropyl donor [H]

COG id: COG0421

COG function: function code E; Spermidine synthase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the spermidine/spermine synthase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001045 [H]

Pfam domain/function: PF01564 Spermine_synth [H]

EC number: =2.5.1.16 [H]

Molecular weight: Translated: 28180; Mature: 28049

Theoretical pI: Translated: 4.98; Mature: 4.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNTFDFEALQHAEPFVIETPGSRSLHFTRLEMQSRMCLDQPDWLSLEYTRLMMGFLLFM
CCCCCCCHHHHCCCCEEEECCCCCCEEEEEEHHHHHHCCCCCCCCCHHHHHHHHHHHHHH
SQPGHVAIIGLGGGSLAKFCYRHLAESRITAVEVNPHVLSLRDKFHVPPDDERFSVILGD
CCCCCEEEEEECCCHHHHHHHHHHHHCCEEEEEECCEEEEEHHCCCCCCCCCEEEEEEEC
GADFVRAAEDSLDTLLVDGFVAEGIPPQLSSQSFYDDCFAALRRGGMAVFNLDGDDGDSE
CHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCEEEEEECCCCCCHH
QHIERIARSFDAPILRVSAATCTNVVVFVCKGDLMLNHSIGTEALPQDMKFDVRAHLLPA
HHHHHHHHHCCCCEEEEEHHHHCCEEEEEEECCEEEECCCCCCCCCCCCCHHHHHHHHHH
FNRVRLALKDQRC
HHHEEEEEECCCC
>Mature Secondary Structure 
SNTFDFEALQHAEPFVIETPGSRSLHFTRLEMQSRMCLDQPDWLSLEYTRLMMGFLLFM
CCCCCCHHHHCCCCEEEECCCCCCEEEEEEHHHHHHCCCCCCCCCHHHHHHHHHHHHHH
SQPGHVAIIGLGGGSLAKFCYRHLAESRITAVEVNPHVLSLRDKFHVPPDDERFSVILGD
CCCCCEEEEEECCCHHHHHHHHHHHHCCEEEEEECCEEEEEHHCCCCCCCCCEEEEEEEC
GADFVRAAEDSLDTLLVDGFVAEGIPPQLSSQSFYDDCFAALRRGGMAVFNLDGDDGDSE
CHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCEEEEEECCCCCCHH
QHIERIARSFDAPILRVSAATCTNVVVFVCKGDLMLNHSIGTEALPQDMKFDVRAHLLPA
HHHHHHHHHCCCCEEEEEHHHHCCEEEEEEECCEEEECCCCCCCCCCCCCHHHHHHHHHH
FNRVRLALKDQRC
HHHEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10761919 [H]