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The map label for this gene is speE [H]

Identifier: 91786814

GI number: 91786814

Start: 929805

End: 930584

Strand: Direct

Name: speE [H]

Synonym: Bpro_0912

Alternate gene names: 91786814

Gene position: 929805-930584 (Clockwise)

Preceding gene: 91786813

Following gene: 91786815

Centisome position: 17.88

GC content: 57.44

Gene sequence:

>780_bases
ATGCCAGACCATCCTGAGTACCACCAGCACCTGCGACCATTTGTGGACGAAACGCTGACCTCGAAGACCTTGTACTTCTC
GGAGTGCGACATTCAAAGCAGGATGCAGATCGGCCGGCCAGACCTGCTGTCGCTGTCGTACACGCGACTCATGATGGGGT
TTTTGCTGCTGGTTCCCCGCCCCCGCAGTATCGCGATGGTGGGTCTTGGCGGTGGCTCACTGGCGAAGTTTTGCTACCGG
TACCTGCCCAGATCGCGGATTGAGGTGATTGAAATCAACCCCCATGTCATCGCTCTGCGCGATAAATTTGAGGTGCCCAA
AGACGACCACCGCTTCCATGTCCATGAGGCGGATGCGGCCGACTTTGTCCGTACAGCCCAGTGCCGATACGACGTGATCC
TGGTCGACGGATTCGACAGTGATGGGCTGCCAGCGTGCCTTGCCTCTCGCACCTTCTACGACAACTGCTTTGACCTGCTT
GAACCCCGTGGTGTTCTGGTGGCGAATTTTCATTCTCACCACCAGAATTCCCCAATCTACATGGATCGCATGAAAAGAAG
TTTTGAGGGACGTATGCTGACCGCCATCAATGACCACGAGCGCAGCAATACCGTAGCCTTTGCATGCAGGGACAGGCTCG
CAGGCACGCCATTGCACGGGCCATTGCATTGCCCACCGCATCTGGCCCCTGACGCTTGGGTCCAACTGGCGCCCAGCATG
TCGAGGGTCAAAGAGGCAGCCAGACGGCAACGTCCAGAAACCCCGCTGCACTCGGTTTAA

Upstream 100 bases:

>100_bases
AGCACGACCGCCTTGGCCGTCGCCGAAATTCATGGTGACAAGTAGTTCCGTCAACTGTTTTGCGCAACGACGCTGTTCCG
CCCATTCATTCGAGGCACCC

Downstream 100 bases:

>100_bases
CAGAAACGATGTCCAATACCTTCGACTTCGAGGCCCTGCAGCACGCGGAGCCCTTCGTGATAGAGACACCGGGTAGCCGG
TCACTGCATTTCACCCGTCT

Product: spermidine synthase-like protein

Products: NA

Alternate protein names: Putrescine aminopropyltransferase; PAPT; SPDSY [H]

Number of amino acids: Translated: 259; Mature: 258

Protein sequence:

>259_residues
MPDHPEYHQHLRPFVDETLTSKTLYFSECDIQSRMQIGRPDLLSLSYTRLMMGFLLLVPRPRSIAMVGLGGGSLAKFCYR
YLPRSRIEVIEINPHVIALRDKFEVPKDDHRFHVHEADAADFVRTAQCRYDVILVDGFDSDGLPACLASRTFYDNCFDLL
EPRGVLVANFHSHHQNSPIYMDRMKRSFEGRMLTAINDHERSNTVAFACRDRLAGTPLHGPLHCPPHLAPDAWVQLAPSM
SRVKEAARRQRPETPLHSV

Sequences:

>Translated_259_residues
MPDHPEYHQHLRPFVDETLTSKTLYFSECDIQSRMQIGRPDLLSLSYTRLMMGFLLLVPRPRSIAMVGLGGGSLAKFCYR
YLPRSRIEVIEINPHVIALRDKFEVPKDDHRFHVHEADAADFVRTAQCRYDVILVDGFDSDGLPACLASRTFYDNCFDLL
EPRGVLVANFHSHHQNSPIYMDRMKRSFEGRMLTAINDHERSNTVAFACRDRLAGTPLHGPLHCPPHLAPDAWVQLAPSM
SRVKEAARRQRPETPLHSV
>Mature_258_residues
PDHPEYHQHLRPFVDETLTSKTLYFSECDIQSRMQIGRPDLLSLSYTRLMMGFLLLVPRPRSIAMVGLGGGSLAKFCYRY
LPRSRIEVIEINPHVIALRDKFEVPKDDHRFHVHEADAADFVRTAQCRYDVILVDGFDSDGLPACLASRTFYDNCFDLLE
PRGVLVANFHSHHQNSPIYMDRMKRSFEGRMLTAINDHERSNTVAFACRDRLAGTPLHGPLHCPPHLAPDAWVQLAPSMS
RVKEAARRQRPETPLHSV

Specific function: Catalyzes the production of spermidine from putrescine and decarboxylated S-adenosylmethionine (dcSAM), which serves as an aminopropyl donor [H]

COG id: COG0421

COG function: function code E; Spermidine synthase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the spermidine/spermine synthase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001045 [H]

Pfam domain/function: PF01564 Spermine_synth [H]

EC number: =2.5.1.16 [H]

Molecular weight: Translated: 29616; Mature: 29485

Theoretical pI: Translated: 7.65; Mature: 7.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPDHPEYHQHLRPFVDETLTSKTLYFSECDIQSRMQIGRPDLLSLSYTRLMMGFLLLVPR
CCCCHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHCCCCCHHHHHHHHHHHHHHHHCCC
PRSIAMVGLGGGSLAKFCYRYLPRSRIEVIEINPHVIALRDKFEVPKDDHRFHVHEADAA
CCCEEEEECCCCHHHHHHHHHCCCCCEEEEEECCCEEEEECCCCCCCCCCEEEEECCCHH
DFVRTAQCRYDVILVDGFDSDGLPACLASRTFYDNCFDLLEPRGVLVANFHSHHQNSPIY
HHHHHHCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEECHHHCCCCCCH
MDRMKRSFEGRMLTAINDHERSNTVAFACRDRLAGTPLHGPLHCPPHLAPDAWVQLAPSM
HHHHHHHHCCCEEEEECCCCCCCEEEEEEHHHHCCCCCCCCCCCCCCCCCHHHHHHCCCH
SRVKEAARRQRPETPLHSV
HHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure 
PDHPEYHQHLRPFVDETLTSKTLYFSECDIQSRMQIGRPDLLSLSYTRLMMGFLLLVPR
CCCHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHCCCCCHHHHHHHHHHHHHHHHCCC
PRSIAMVGLGGGSLAKFCYRYLPRSRIEVIEINPHVIALRDKFEVPKDDHRFHVHEADAA
CCCEEEEECCCCHHHHHHHHHCCCCCEEEEEECCCEEEEECCCCCCCCCCEEEEECCCHH
DFVRTAQCRYDVILVDGFDSDGLPACLASRTFYDNCFDLLEPRGVLVANFHSHHQNSPIY
HHHHHHCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEECHHHCCCCCCH
MDRMKRSFEGRMLTAINDHERSNTVAFACRDRLAGTPLHGPLHCPPHLAPDAWVQLAPSM
HHHHHHHHCCCEEEEECCCCCCCEEEEEEHHHHCCCCCCCCCCCCCCCCCHHHHHHCCCH
SRVKEAARRQRPETPLHSV
HHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 14500782 [H]