Definition | Polaromonas sp. JS666 chromosome, complete genome. |
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Accession | NC_007948 |
Length | 5,200,264 |
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The map label for this gene is nadA [H]
Identifier: 91786805
GI number: 91786805
Start: 920918
End: 922051
Strand: Direct
Name: nadA [H]
Synonym: Bpro_0903
Alternate gene names: 91786805
Gene position: 920918-922051 (Clockwise)
Preceding gene: 91786804
Following gene: 91786806
Centisome position: 17.71
GC content: 66.58
Gene sequence:
>1134_bases ATGGGCGCCGTGACTGACGTGATTGATGTTGAATACGACTCGCCGCACCCGGCGGCGGTTCCGGGCGCCTCGGCGTGCGA CACCAGGCACGCCTGGGCGCGTGTACCGGTCGAGCCCGGCCCCAAGCAGCGTGCCGCGCTCAAGGACAAGATCCGCCGGC TGCTGAAGGAGCGCAACGCGGTGATGGTGTCGCACTACTACGTGCACCCCGACCTGCAGGACCTGGCCGAGGAAACCGGC GGTATCGTCAGCGACTCGCTGGAGATGGCGCGCTTTGGCCAGAACCATGCGGCGCAGACGCTGGTGGTCTCGGGCGTGCG CTTCATGGGCGAGACGGCCAAGATTGTTTCGCCCGAAAAGCGCGTGCTGATGCCCGACCTCGACGCGACCTGCTCGCTGG ACCTGGGGTGTCCGGTCGATGAGTTCAGCGCTTTTTGCGACGCGCACCCGGACCGCACCGTGGTAGTCTATGCCAACACC AGCGCGGCCGTGAAGGCGCGCGCCGACTGGGTGGTCACATCCAGCTGCGCGCTCGACATTGTGCAGGCACTGAAAGACAA GGGGCACAAGATCTTGTGGGCGCCCGACAAGCATCTGGGCGGCTACATCCAGCGCCAGACTGGCGCCGATATGGTGTTCT GGAACGGCACCTGCATCGTGCACGACGAGTTCAAGGCCTTCGAGCTCGAAGCGCTCAAGAAGGAGCACCCGAAAGCCAGG GTGCTGGTGCATCCCGAGTCACCGGCCGATGTGGTGGCGCTGGCCGACGCGGTGGGTTCCACCTCGGCCATCCTGAAAGC CGCGCGCGAACTGGACGCCCCGGAGTTCATTGTCGCCACCGACAGCGGCATGATGCACAAGCTGCGCACACTCAACCCCG GCAAGATCTTCATCGAGGCGCCGACGGCTGGCAACAGCGCGACCTGCAAGAGCTGCGCGCACTGCCCCTGGATGGCCATG AACAGCCTGGCGGGCCTGGCCCATGTGCTGGAGACCGGCCGCAATGAAATTCACGTTGATCCGGCGCTGGGCCTGCGTGC CCGCCTGCCGATTGACCGCATGCTGGCGTTCACCGCTGCGCTGAAGGCCGGCCAGCCGGCGGGCGCGCTGGTGCCGAACA TCGGCGCGGCCTGA
Upstream 100 bases:
>100_bases GGCCGAAACTGGCGTGGACCGGATTTCCATTGGCGGCCTGACCAAGGACGTCAAGGCCATCGATTTCTCGATGCGTTTTC ACGAGCTGTAAGGAACTGCG
Downstream 100 bases:
>100_bases TGGGAGCCTTGTCGGCACTCATCGACTTCTCCAACCCGGACCATCCCGACGGGCCACGTTTGCGCCAGGCCTTTGGCGTG GCGCGCCAGGTGCTGGTGGC
Product: quinolinate synthetase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 377; Mature: 376
Protein sequence:
>377_residues MGAVTDVIDVEYDSPHPAAVPGASACDTRHAWARVPVEPGPKQRAALKDKIRRLLKERNAVMVSHYYVHPDLQDLAEETG GIVSDSLEMARFGQNHAAQTLVVSGVRFMGETAKIVSPEKRVLMPDLDATCSLDLGCPVDEFSAFCDAHPDRTVVVYANT SAAVKARADWVVTSSCALDIVQALKDKGHKILWAPDKHLGGYIQRQTGADMVFWNGTCIVHDEFKAFELEALKKEHPKAR VLVHPESPADVVALADAVGSTSAILKAARELDAPEFIVATDSGMMHKLRTLNPGKIFIEAPTAGNSATCKSCAHCPWMAM NSLAGLAHVLETGRNEIHVDPALGLRARLPIDRMLAFTAALKAGQPAGALVPNIGAA
Sequences:
>Translated_377_residues MGAVTDVIDVEYDSPHPAAVPGASACDTRHAWARVPVEPGPKQRAALKDKIRRLLKERNAVMVSHYYVHPDLQDLAEETG GIVSDSLEMARFGQNHAAQTLVVSGVRFMGETAKIVSPEKRVLMPDLDATCSLDLGCPVDEFSAFCDAHPDRTVVVYANT SAAVKARADWVVTSSCALDIVQALKDKGHKILWAPDKHLGGYIQRQTGADMVFWNGTCIVHDEFKAFELEALKKEHPKAR VLVHPESPADVVALADAVGSTSAILKAARELDAPEFIVATDSGMMHKLRTLNPGKIFIEAPTAGNSATCKSCAHCPWMAM NSLAGLAHVLETGRNEIHVDPALGLRARLPIDRMLAFTAALKAGQPAGALVPNIGAA >Mature_376_residues GAVTDVIDVEYDSPHPAAVPGASACDTRHAWARVPVEPGPKQRAALKDKIRRLLKERNAVMVSHYYVHPDLQDLAEETGG IVSDSLEMARFGQNHAAQTLVVSGVRFMGETAKIVSPEKRVLMPDLDATCSLDLGCPVDEFSAFCDAHPDRTVVVYANTS AAVKARADWVVTSSCALDIVQALKDKGHKILWAPDKHLGGYIQRQTGADMVFWNGTCIVHDEFKAFELEALKKEHPKARV LVHPESPADVVALADAVGSTSAILKAARELDAPEFIVATDSGMMHKLRTLNPGKIFIEAPTAGNSATCKSCAHCPWMAMN SLAGLAHVLETGRNEIHVDPALGLRARLPIDRMLAFTAALKAGQPAGALVPNIGAA
Specific function: Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate [H]
COG id: COG0379
COG function: function code H; Quinolinate synthase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the quinolinate synthase A family. Type 1 subfamily [H]
Homologues:
Organism=Escherichia coli, GI1786964, Length=332, Percent_Identity=62.9518072289157, Blast_Score=431, Evalue=1e-122,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003473 [H]
Pfam domain/function: PF02445 NadA [H]
EC number: =2.5.1.72 [H]
Molecular weight: Translated: 40441; Mature: 40310
Theoretical pI: Translated: 6.67; Mature: 6.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGAVTDVIDVEYDSPHPAAVPGASACDTRHAWARVPVEPGPKQRAALKDKIRRLLKERNA CCCCCCEEEEECCCCCCCCCCCCCCCCCCCCEEECCCCCCCCHHHHHHHHHHHHHHHCCE VMVSHYYVHPDLQDLAEETGGIVSDSLEMARFGQNHAAQTLVVSGVRFMGETAKIVSPEK EEEEEEEECCCHHHHHHHHCCEEHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHCCCCC RVLMPDLDATCSLDLGCPVDEFSAFCDAHPDRTVVVYANTSAAVKARADWVVTSSCALDI EEECCCCCCCEEEECCCCHHHHHHHHCCCCCCEEEEEECCCCEEEECCCEEEEHHHHHHH VQALKDKGHKILWAPDKHLGGYIQRQTGADMVFWNGTCIVHDEFKAFELEALKKEHPKAR HHHHHHCCCEEEECCCHHHCCEEECCCCCCEEEECCEEEEECCCCHHHHHHHHHCCCCEE VLVHPESPADVVALADAVGSTSAILKAARELDAPEFIVATDSGMMHKLRTLNPGKIFIEA EEECCCCCCHHHHHHHHHCCHHHHHHHHHHCCCCCEEEECCCCHHHHHHCCCCCEEEEEC PTAGNSATCKSCAHCPWMAMNSLAGLAHVLETGRNEIHVDPALGLRARLPIDRMLAFTAA CCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHCCCCEEEECCCCCCEECCCHHHHHHHHHH LKAGQPAGALVPNIGAA HHCCCCCCCCCCCCCCC >Mature Secondary Structure GAVTDVIDVEYDSPHPAAVPGASACDTRHAWARVPVEPGPKQRAALKDKIRRLLKERNA CCCCCEEEEECCCCCCCCCCCCCCCCCCCCEEECCCCCCCCHHHHHHHHHHHHHHHCCE VMVSHYYVHPDLQDLAEETGGIVSDSLEMARFGQNHAAQTLVVSGVRFMGETAKIVSPEK EEEEEEEECCCHHHHHHHHCCEEHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHCCCCC RVLMPDLDATCSLDLGCPVDEFSAFCDAHPDRTVVVYANTSAAVKARADWVVTSSCALDI EEECCCCCCCEEEECCCCHHHHHHHHCCCCCCEEEEEECCCCEEEECCCEEEEHHHHHHH VQALKDKGHKILWAPDKHLGGYIQRQTGADMVFWNGTCIVHDEFKAFELEALKKEHPKAR HHHHHHCCCEEEECCCHHHCCEEECCCCCCEEEECCEEEEECCCCHHHHHHHHHCCCCEE VLVHPESPADVVALADAVGSTSAILKAARELDAPEFIVATDSGMMHKLRTLNPGKIFIEA EEECCCCCCHHHHHHHHHCCHHHHHHHHHHCCCCCEEEECCCCHHHHHHCCCCCEEEEEC PTAGNSATCKSCAHCPWMAMNSLAGLAHVLETGRNEIHVDPALGLRARLPIDRMLAFTAA CCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHCCCCEEEECCCCCCEECCCHHHHHHHHHH LKAGQPAGALVPNIGAA HHCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA