Definition | Polaromonas sp. JS666 chromosome, complete genome. |
---|---|
Accession | NC_007948 |
Length | 5,200,264 |
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The map label for this gene is nadC [H]
Identifier: 91786804
GI number: 91786804
Start: 920045
End: 920908
Strand: Direct
Name: nadC [H]
Synonym: Bpro_0902
Alternate gene names: 91786804
Gene position: 920045-920908 (Clockwise)
Preceding gene: 91786796
Following gene: 91786805
Centisome position: 17.69
GC content: 65.05
Gene sequence:
>864_bases ATGAAAAAGTCATTTGATTTCTCGGCTGAGGCCATCGTTGAGGTAGCCAAGGCCGACGCAATTCTTGCGCTGGCCGAAGA TGTGGGCGCGGGCGATTTGACGGCGGGGCTGATTGATCCGGCCCGCAGCGCCCGGGCGCAGGTGCTGGCACGCGAAAGCG CCGTGATTTGCGGCAGCGCCTGGGTGGAAGCCACGATTTTGCAGCTCGACCCCCAGGCCCGCCTGACCTGGCATGTGCGG GACGGCGAGCGCTGCGCCGCCAACCAGGTGGTGCTGGAGATACAGGGTCGGGCGCAGGCCCTGCTGACGGCCGAGCGCAC GGCGCTCAATTTTCTGCAGCTGCTGAGCGCGGTGGCCAGCAAAACGGCTGGCTATGTCGCTGCGGTGCAAGGCACGCGGG CGCAGATTGTGGACACCCGCAAAACATTGCCCGGCCTGCGCCTGGCGCAGAAATACGCGGTGCGTACCGGCGGCGGCACC AACCACCGGATTGGCCTCTACGACGCGGTGCTGATCAAGGAAAACCATATTGCCGCTGCCGGCGGCATTGCGCAGGTGCT GGCGCGTGCGGCCGCGGTGGCGGCCCAGGCAGATTTTGTGCAAATCGAGGTTGAAGACCTGGCCGAGTTGCAGCAGGCCC TGAATGCCGGCGCCCGCATGGTGCTGCTCGACAACATGACGCTGGACCAGTTGCGCGAGGCGGTGCGCATCAACGAGGGG CGCGCCAGCCTGGAGATCTCCGGTGGCGTGACGCAGGAAAGCCTGCGCAGCCTGGCCGAAACTGGCGTGGACCGGATTTC CATTGGCGGCCTGACCAAGGACGTCAAGGCCATCGATTTCTCGATGCGTTTTCACGAGCTGTAA
Upstream 100 bases:
>100_bases GTAACATTTAGTCTGTTGAACCGTAGTCTAGGGGAGTCTTTATTCCCGTAGTCTAGGGGAGTCTTTATTCCATCTGGGCG AGTCTTTATTCCAACTGGTT
Downstream 100 bases:
>100_bases GGAACTGCGATGGGCGCCGTGACTGACGTGATTGATGTTGAATACGACTCGCCGCACCCGGCGGCGGTTCCGGGCGCCTC GGCGTGCGACACCAGGCACG
Product: nicotinate-nucleotide pyrophosphorylase
Products: NA
Alternate protein names: Quinolinate phosphoribosyltransferase [decarboxylating]; QAPRTase [H]
Number of amino acids: Translated: 287; Mature: 287
Protein sequence:
>287_residues MKKSFDFSAEAIVEVAKADAILALAEDVGAGDLTAGLIDPARSARAQVLARESAVICGSAWVEATILQLDPQARLTWHVR DGERCAANQVVLEIQGRAQALLTAERTALNFLQLLSAVASKTAGYVAAVQGTRAQIVDTRKTLPGLRLAQKYAVRTGGGT NHRIGLYDAVLIKENHIAAAGGIAQVLARAAAVAAQADFVQIEVEDLAELQQALNAGARMVLLDNMTLDQLREAVRINEG RASLEISGGVTQESLRSLAETGVDRISIGGLTKDVKAIDFSMRFHEL
Sequences:
>Translated_287_residues MKKSFDFSAEAIVEVAKADAILALAEDVGAGDLTAGLIDPARSARAQVLARESAVICGSAWVEATILQLDPQARLTWHVR DGERCAANQVVLEIQGRAQALLTAERTALNFLQLLSAVASKTAGYVAAVQGTRAQIVDTRKTLPGLRLAQKYAVRTGGGT NHRIGLYDAVLIKENHIAAAGGIAQVLARAAAVAAQADFVQIEVEDLAELQQALNAGARMVLLDNMTLDQLREAVRINEG RASLEISGGVTQESLRSLAETGVDRISIGGLTKDVKAIDFSMRFHEL >Mature_287_residues MKKSFDFSAEAIVEVAKADAILALAEDVGAGDLTAGLIDPARSARAQVLARESAVICGSAWVEATILQLDPQARLTWHVR DGERCAANQVVLEIQGRAQALLTAERTALNFLQLLSAVASKTAGYVAAVQGTRAQIVDTRKTLPGLRLAQKYAVRTGGGT NHRIGLYDAVLIKENHIAAAGGIAQVLARAAAVAAQADFVQIEVEDLAELQQALNAGARMVLLDNMTLDQLREAVRINEG RASLEISGGVTQESLRSLAETGVDRISIGGLTKDVKAIDFSMRFHEL
Specific function: Involved in the catabolism of quinolinic acid (QA) [H]
COG id: COG0157
COG function: function code H; Nicotinate-nucleotide pyrophosphorylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the nadC/modD family [H]
Homologues:
Organism=Homo sapiens, GI45269149, Length=258, Percent_Identity=36.046511627907, Blast_Score=137, Evalue=1e-32, Organism=Escherichia coli, GI1786299, Length=268, Percent_Identity=50.3731343283582, Blast_Score=249, Evalue=2e-67, Organism=Saccharomyces cerevisiae, GI6321162, Length=284, Percent_Identity=30.6338028169014, Blast_Score=123, Evalue=4e-29,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR004393 - InterPro: IPR002638 - InterPro: IPR022412 [H]
Pfam domain/function: PF01729 QRPTase_C; PF02749 QRPTase_N [H]
EC number: =2.4.2.19 [H]
Molecular weight: Translated: 30476; Mature: 30476
Theoretical pI: Translated: 5.76; Mature: 5.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKSFDFSAEAIVEVAKADAILALAEDVGAGDLTAGLIDPARSARAQVLARESAVICGSA CCCCCCCCHHHHHHHHHHHHHEEEHHCCCCCCHHHHHCCCHHHHHHHHHHHCCEEEECCH WVEATILQLDPQARLTWHVRDGERCAANQVVLEIQGRAQALLTAERTALNFLQLLSAVAS HHEEEEEEECCCCEEEEEECCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHH KTAGYVAAVQGTRAQIVDTRKTLPGLRLAQKYAVRTGGGTNHRIGLYDAVLIKENHIAAA HCCCEEEEECCCHHHEEHHHHCCCCHHHHHHHHHCCCCCCCCEEEEEEEEEEECCCEEHH GGIAQVLARAAAVAAQADFVQIEVEDLAELQQALNAGARMVLLDNMTLDQLREAVRINEG CHHHHHHHHHHHHHHHCCEEEEEHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHCCCC RASLEISGGVTQESLRSLAETGVDRISIGGLTKDVKAIDFSMRFHEL CEEEEECCCCCHHHHHHHHHCCCCEEEECCCCCCHHHHEEEEHCCCC >Mature Secondary Structure MKKSFDFSAEAIVEVAKADAILALAEDVGAGDLTAGLIDPARSARAQVLARESAVICGSA CCCCCCCCHHHHHHHHHHHHHEEEHHCCCCCCHHHHHCCCHHHHHHHHHHHCCEEEECCH WVEATILQLDPQARLTWHVRDGERCAANQVVLEIQGRAQALLTAERTALNFLQLLSAVAS HHEEEEEEECCCCEEEEEECCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHH KTAGYVAAVQGTRAQIVDTRKTLPGLRLAQKYAVRTGGGTNHRIGLYDAVLIKENHIAAA HCCCEEEEECCCHHHEEHHHHCCCCHHHHHHHHHCCCCCCCCEEEEEEEEEEECCCEEHH GGIAQVLARAAAVAAQADFVQIEVEDLAELQQALNAGARMVLLDNMTLDQLREAVRINEG CHHHHHHHHHHHHHHHCCEEEEEHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHCCCC RASLEISGGVTQESLRSLAETGVDRISIGGLTKDVKAIDFSMRFHEL CEEEEECCCCCHHHHHHHHHCCCCEEEECCCCCCHHHHEEEEHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10984043; 2430961; 8419294 [H]