The gene/protein map for NC_007948 is currently unavailable.
Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

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The map label for this gene is 91786775

Identifier: 91786775

GI number: 91786775

Start: 896475

End: 897011

Strand: Direct

Name: 91786775

Synonym: Bpro_0873

Alternate gene names: NA

Gene position: 896475-897011 (Clockwise)

Preceding gene: 91786773

Following gene: 91786776

Centisome position: 17.24

GC content: 67.23

Gene sequence:

>537_bases
ATGAGCCTGGCAATCCGTGACGAGGTGAAAGCGCTCGCGGCCCTCGCCCTGGCGGTCTGGCTGGCCTGTTGCGGTCCCGC
GCGTGCGTCGGCTCCGGCCCAGGCCATGTGGGTGGGCGTGGTGACCTATGTCGTGGATGGCGACACCGTCTGGGTGCGGC
CAGCGGATGGCGGCAAGCCCGTCAGCGTTCGAGTGGACGGCATTGACGCCCCCGAAATTTGCCAGCCGGGAGGTGGCATT
TCCCGCGATGCGCTCAAGCGGCGGGCCCTGGGCCAGCGCATCGCGGTTTTCGGCAGGCGCCACGACGATTACGGTCGGCT
GCTGGCCCGGCTGGAATTGAATGGCGATGACCTGGGCCAATGGATGGTCTCGCAAGGCCAGGCGTGGTCGTATCAGTATG
GCCGGCGTGCGGGCCCCTACGCCCTGCAGCAAAGCCGCGCGAAAGCCGCAGGACTTGGTCTTTTCTCGCCGTCTGATGCC
ATGCCCCCGGTCTATCCCCGGGCCTTTCGCAAGCAGCATGGACCTTGCCACGCTTGA

Upstream 100 bases:

>100_bases
GCACAAGACGCACAGGACGGTCGCGGTGCCTGTAAAAAATCATTAATTTCGGCCGAAAATCCGTCAGGCAAGGAATCGTG
CGTTATCAATTTAACAGTCT

Downstream 100 bases:

>100_bases
GCCTGTGAACAGTTTCCTGAATTGCGGTGTTTTCTGAAGATGCCAGTCCGGCGCCGGATGAGGGATTTGGATTTGTCCTA
CGGCATCTTCGGCCGGCGCC

Product: nuclease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 178; Mature: 177

Protein sequence:

>178_residues
MSLAIRDEVKALAALALAVWLACCGPARASAPAQAMWVGVVTYVVDGDTVWVRPADGGKPVSVRVDGIDAPEICQPGGGI
SRDALKRRALGQRIAVFGRRHDDYGRLLARLELNGDDLGQWMVSQGQAWSYQYGRRAGPYALQQSRAKAAGLGLFSPSDA
MPPVYPRAFRKQHGPCHA

Sequences:

>Translated_178_residues
MSLAIRDEVKALAALALAVWLACCGPARASAPAQAMWVGVVTYVVDGDTVWVRPADGGKPVSVRVDGIDAPEICQPGGGI
SRDALKRRALGQRIAVFGRRHDDYGRLLARLELNGDDLGQWMVSQGQAWSYQYGRRAGPYALQQSRAKAAGLGLFSPSDA
MPPVYPRAFRKQHGPCHA
>Mature_177_residues
SLAIRDEVKALAALALAVWLACCGPARASAPAQAMWVGVVTYVVDGDTVWVRPADGGKPVSVRVDGIDAPEICQPGGGIS
RDALKRRALGQRIAVFGRRHDDYGRLLARLELNGDDLGQWMVSQGQAWSYQYGRRAGPYALQQSRAKAAGLGLFSPSDAM
PPVYPRAFRKQHGPCHA

Specific function: Unknown

COG id: COG1525

COG function: function code L; Micrococcal nuclease (thermonuclease) homologs

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the thermonuclease family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016071
- InterPro:   IPR006021
- InterPro:   IPR002071 [H]

Pfam domain/function: PF00565 SNase [H]

EC number: NA

Molecular weight: Translated: 19140; Mature: 19009

Theoretical pI: Translated: 9.75; Mature: 9.75

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS50830 TNASE_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLAIRDEVKALAALALAVWLACCGPARASAPAQAMWVGVVTYVVDGDTVWVRPADGGKP
CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHEEEEECCCEEEEEECCCCCE
VSVRVDGIDAPEICQPGGGISRDALKRRALGQRIAVFGRRHDDYGRLLARLELNGDDLGQ
EEEEECCCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHEEEHEECCCCHHHH
WMVSQGQAWSYQYGRRAGPYALQQSRAKAAGLGLFSPSDAMPPVYPRAFRKQHGPCHA
HHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHCCCCCCC
>Mature Secondary Structure 
SLAIRDEVKALAALALAVWLACCGPARASAPAQAMWVGVVTYVVDGDTVWVRPADGGKP
CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHEEEEECCCEEEEEECCCCCE
VSVRVDGIDAPEICQPGGGISRDALKRRALGQRIAVFGRRHDDYGRLLARLELNGDDLGQ
EEEEECCCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHEEEHEECCCCHHHH
WMVSQGQAWSYQYGRRAGPYALQQSRAKAAGLGLFSPSDAMPPVYPRAFRKQHGPCHA
HHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9722640; 9628576 [H]