Definition | Polaromonas sp. JS666 chromosome, complete genome. |
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Accession | NC_007948 |
Length | 5,200,264 |
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The map label for this gene is osmY [C]
Identifier: 91786776
GI number: 91786776
Start: 897253
End: 897744
Strand: Direct
Name: osmY [C]
Synonym: Bpro_0874
Alternate gene names: 91786776
Gene position: 897253-897744 (Clockwise)
Preceding gene: 91786775
Following gene: 91786783
Centisome position: 17.25
GC content: 58.54
Gene sequence:
>492_bases ATGAAAGAAACACCTTCCGATCATTGCAAGCCCCGGGTGAGGCTGACAGGCAGTTTGCTGGTCCTTCTTTTCGCCTTGAG TGCTTGCGGCAAGCAAGATGATGGCAAAACGGCCGGCCAGCAGCTGGACACCGCCATTGCGAAAACCGAACAGGCCGCCG AGAAAGCGAAAGCCAAGACCGAAAGTGCCATGGCCAATGCCGGTGTGGCGATGAAAGATGCGACCCGGGAGGTTGAAGCC TCCGGCAAGCAGATAGCGGACAAGGCCGGGGAAAAGATCAACGACGTGACCATCACCGCCGCAGTGTCGTCCGGGCTTGC CAGGGATCCCGAGCTGAGCGCCCTGAAAATCAATGTGGATACCAAAAATGGCGCTGTCACCTTGACGGGCTCTGCCCCTA CCGAAGCTGCGCGCGAGAGAGCCGGCACCCTTGCCAAAACTGTCAAAGGTGTGAATTCGGTCGAGAACCGGCTCACCGTG AAGGCGGGTTAA
Upstream 100 bases:
>100_bases CGGCTCAGGATCGTCGCCTGCTGTGTGGTCCGGCCCCACTTGCTCGTTGAGCGTGCCTGGTGCCTATTTCACGACGACAG GATCACGAACAGGAGTACTC
Downstream 100 bases:
>100_bases CAGAGAAACGCTGCCGCATGACCTCCACCGGCCAGGTGCAGGTGGAAGCAGGCGGAAAAAGCAGACGATGAAAACTCCAC CGTCTGCCTTCGGTTGACCC
Product: transport protein
Products: NA
Alternate protein names: Transport-Associated Protein
Number of amino acids: Translated: 163; Mature: 163
Protein sequence:
>163_residues MKETPSDHCKPRVRLTGSLLVLLFALSACGKQDDGKTAGQQLDTAIAKTEQAAEKAKAKTESAMANAGVAMKDATREVEA SGKQIADKAGEKINDVTITAAVSSGLARDPELSALKINVDTKNGAVTLTGSAPTEAARERAGTLAKTVKGVNSVENRLTV KAG
Sequences:
>Translated_163_residues MKETPSDHCKPRVRLTGSLLVLLFALSACGKQDDGKTAGQQLDTAIAKTEQAAEKAKAKTESAMANAGVAMKDATREVEA SGKQIADKAGEKINDVTITAAVSSGLARDPELSALKINVDTKNGAVTLTGSAPTEAARERAGTLAKTVKGVNSVENRLTV KAG >Mature_163_residues MKETPSDHCKPRVRLTGSLLVLLFALSACGKQDDGKTAGQQLDTAIAKTEQAAEKAKAKTESAMANAGVAMKDATREVEA SGKQIADKAGEKINDVTITAAVSSGLARDPELSALKINVDTKNGAVTLTGSAPTEAARERAGTLAKTVKGVNSVENRLTV KAG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Periplasmic Protein [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: 2960 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 780 Molecules/Cell In: Early Stationary Phase, Rich Media (Based on E. coli). 160 Molecules/Cell In: Early Stationary Phase, Rich Media (Based on E. coli). 80 Molecules/Cell In: Stati
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16791; Mature: 16791
Theoretical pI: Translated: 9.68; Mature: 9.68
Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS50914 BON
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKETPSDHCKPRVRLTGSLLVLLFALSACGKQDDGKTAGQQLDTAIAKTEQAAEKAKAKT CCCCCCCCCCCCEEEHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH ESAMANAGVAMKDATREVEASGKQIADKAGEKINDVTITAAVSSGLARDPELSALKINVD HHHHHHCCCHHHHHHHHHHHCHHHHHHHHCCCCCCEEEEEEHHCCCCCCCCCEEEEEEEE TKNGAVTLTGSAPTEAARERAGTLAKTVKGVNSVENRLTVKAG CCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHEEEEECC >Mature Secondary Structure MKETPSDHCKPRVRLTGSLLVLLFALSACGKQDDGKTAGQQLDTAIAKTEQAAEKAKAKT CCCCCCCCCCCCEEEHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH ESAMANAGVAMKDATREVEASGKQIADKAGEKINDVTITAAVSSGLARDPELSALKINVD HHHHHHCCCHHHHHHHHHHHCHHHHHHHHCCCCCCEEEEEEHHCCCCCCCCCEEEEEEEE TKNGAVTLTGSAPTEAARERAGTLAKTVKGVNSVENRLTVKAG CCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA