The gene/protein map for NC_007948 is currently unavailable.
Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

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The map label for this gene is ycgF [C]

Identifier: 91786772

GI number: 91786772

Start: 893789

End: 894211

Strand: Direct

Name: ycgF [C]

Synonym: Bpro_0870

Alternate gene names: 91786772

Gene position: 893789-894211 (Clockwise)

Preceding gene: 91786771

Following gene: 91786773

Centisome position: 17.19

GC content: 60.05

Gene sequence:

>423_bases
ATGTTAGTCCGTTTGCTTTATGCCAGTCGCGCGCTGGACACCCGTCCCGATGCGATTGAGGCCATTCTGACCCAGTCGCG
CCAGTACAACCCGACCTGCGGCATCACCGGCATTCTTTGTTACGGTGGGGGGATTTTTCTGCAGGCCATCGAGGGCGGCC
GCATGGCCGTCAGCGAGCTGTATGGCCACATCCAGCGGGACCCGCGCCACAAGGACGTGGCGCTGCTCGACTATGAAGAA
ATTTCCGAACGCCGCTTCGGCGGCTGGACCATGGGGCAGGTCAACCTGCTCAAGCTCAACCACTCCATCCTGCTGAAATA
TTCCGAAAAGCCGGAACTCGACCCTTACTCGGTATCGGGCAAGGTATCGATGGCCTTGCTGGAGGAATTGATGGCGACCG
CCGCCATCATTGGCCGGGCCTGA

Upstream 100 bases:

>100_bases
GACAGCAAGATGATCAATTCGGTGATGCGCGGCGTATTCCTGAAGGACCCCAACCTGCGCCGTGAATTCCTTGCCCTGAT
TCCACAGAAAGGATGATCCC

Downstream 100 bases:

>100_bases
TTGCTGGCACGGTTTTCATTGTGACCGGCGTGATGGTGCTGCTGGCAGTGGGTGCATGAGCATATGACGTCCGGCCTGCT
GATCGGTTGCGACTTTTCCA

Product: sensors of blue-light using FAD

Products: NA

Alternate protein names: BLUF Domain Protein; Sensors Of Blue-Light Using FAD Family; Sensors Of Blue-Light Using FAD; Blue-Light Sensor BluF Domain; Activator Of Photopigment And Puc Expression; Bluf Domain Protein

Number of amino acids: Translated: 140; Mature: 140

Protein sequence:

>140_residues
MLVRLLYASRALDTRPDAIEAILTQSRQYNPTCGITGILCYGGGIFLQAIEGGRMAVSELYGHIQRDPRHKDVALLDYEE
ISERRFGGWTMGQVNLLKLNHSILLKYSEKPELDPYSVSGKVSMALLEELMATAAIIGRA

Sequences:

>Translated_140_residues
MLVRLLYASRALDTRPDAIEAILTQSRQYNPTCGITGILCYGGGIFLQAIEGGRMAVSELYGHIQRDPRHKDVALLDYEE
ISERRFGGWTMGQVNLLKLNHSILLKYSEKPELDPYSVSGKVSMALLEELMATAAIIGRA
>Mature_140_residues
MLVRLLYASRALDTRPDAIEAILTQSRQYNPTCGITGILCYGGGIFLQAIEGGRMAVSELYGHIQRDPRHKDVALLDYEE
ISERRFGGWTMGQVNLLKLNHSILLKYSEKPELDPYSVSGKVSMALLEELMATAAIIGRA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15542; Mature: 15542

Theoretical pI: Translated: 6.78; Mature: 6.78

Prosite motif: PS50925 BLUF

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLVRLLYASRALDTRPDAIEAILTQSRQYNPTCGITGILCYGGGIFLQAIEGGRMAVSEL
CEEEEEEHHHCCCCCHHHHHHHHHCCCCCCCCCCCEEEEEECCCEEEEEECCCCEEHHHH
YGHIQRDPRHKDVALLDYEEISERRFGGWTMGQVNLLKLNHSILLKYSEKPELDPYSVSG
HHHHCCCCCCCCEEEECHHHHHHCCCCCCCCCEEEEEEECCEEEEEECCCCCCCCCCCCC
KVSMALLEELMATAAIIGRA
CHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MLVRLLYASRALDTRPDAIEAILTQSRQYNPTCGITGILCYGGGIFLQAIEGGRMAVSEL
CEEEEEEHHHCCCCCHHHHHHHHHCCCCCCCCCCCEEEEEECCCEEEEEECCCCEEHHHH
YGHIQRDPRHKDVALLDYEEISERRFGGWTMGQVNLLKLNHSILLKYSEKPELDPYSVSG
HHHHCCCCCCCCEEEECHHHHHHCCCCCCCCCEEEEEEECCEEEEEECCCCCCCCCCCCC
KVSMALLEELMATAAIIGRA
CHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA