Definition | Polaromonas sp. JS666 chromosome, complete genome. |
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Accession | NC_007948 |
Length | 5,200,264 |
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The map label for this gene is hitA [H]
Identifier: 91786715
GI number: 91786715
Start: 837031
End: 837390
Strand: Direct
Name: hitA [H]
Synonym: Bpro_0813
Alternate gene names: 91786715
Gene position: 837031-837390 (Clockwise)
Preceding gene: 91786714
Following gene: 91786716
Centisome position: 16.1
GC content: 62.5
Gene sequence:
>360_bases ATGAGCCACTCTGACAACTGCATTTTCTGCAAAATTGCCGCAGGCGCCATTCCCAGCCGCAAGGTGTATGAAGACGACGA ACTGTTCGCCTTTCATGACATCCACCCCTGGGCGCCGGTGCATTTCCTCATCATCCCCAAGGCGCATATCCCGTCCATGG CGCAGGTGGGGCCTGAGCATGAAGGGGTGCTGGGACGCATGATGGTGCTGGCGCCGCGGCTGGCACTGGAGCTGGGCTGC AACCCCTATCCTGCGGGCGGTTTCCGCATCCTGACCAACACGGGCGCCGAAGGGGGCCAGGAAGTCCATCACCTGCATTT CCATGTGATCGGCGGGCCCCGGCCCTGGCTCAAGGGGTAG
Upstream 100 bases:
>100_bases CGCTGCATCAAGGGCTGGATGCGCTTTAACAGCCAGCGGCCGTCCTGATTCCGGCCGCAGTGCCTTTCCAAAAAACCTTT CCTGACCCATCAACGACCGC
Downstream 100 bases:
>100_bases CCAGGGTAAGTGAGAAAATGCAGGCGGGCCGGCCAACTTGGGGCACGCCGTTTGGAACCTCGCCGGCGACGCGGTCTCTA ACCCGCAGGTCAATGTGTGT
Product: histidine triad (HIT) protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 119; Mature: 118
Protein sequence:
>119_residues MSHSDNCIFCKIAAGAIPSRKVYEDDELFAFHDIHPWAPVHFLIIPKAHIPSMAQVGPEHEGVLGRMMVLAPRLALELGC NPYPAGGFRILTNTGAEGGQEVHHLHFHVIGGPRPWLKG
Sequences:
>Translated_119_residues MSHSDNCIFCKIAAGAIPSRKVYEDDELFAFHDIHPWAPVHFLIIPKAHIPSMAQVGPEHEGVLGRMMVLAPRLALELGC NPYPAGGFRILTNTGAEGGQEVHHLHFHVIGGPRPWLKG >Mature_118_residues SHSDNCIFCKIAAGAIPSRKVYEDDELFAFHDIHPWAPVHFLIIPKAHIPSMAQVGPEHEGVLGRMMVLAPRLALELGCN PYPAGGFRILTNTGAEGGQEVHHLHFHVIGGPRPWLKG
Specific function: Unknown
COG id: COG0537
COG function: function code FGR; Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 HIT domain [H]
Homologues:
Organism=Homo sapiens, GI4885413, Length=107, Percent_Identity=43.9252336448598, Blast_Score=104, Evalue=2e-23, Organism=Homo sapiens, GI14211923, Length=106, Percent_Identity=39.622641509434, Blast_Score=88, Evalue=1e-18, Organism=Escherichia coli, GI1787346, Length=113, Percent_Identity=46.0176991150442, Blast_Score=89, Evalue=9e-20, Organism=Caenorhabditis elegans, GI17506713, Length=110, Percent_Identity=40.9090909090909, Blast_Score=102, Evalue=3e-23, Organism=Saccharomyces cerevisiae, GI6320078, Length=104, Percent_Identity=41.3461538461538, Blast_Score=69, Evalue=1e-13, Organism=Drosophila melanogaster, GI28574010, Length=109, Percent_Identity=40.3669724770642, Blast_Score=91, Evalue=2e-19, Organism=Drosophila melanogaster, GI24581222, Length=109, Percent_Identity=40.3669724770642, Blast_Score=90, Evalue=3e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011146 - InterPro: IPR011151 - InterPro: IPR019808 - InterPro: IPR001310 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13048; Mature: 12917
Theoretical pI: Translated: 7.07; Mature: 7.07
Prosite motif: PS00892 HIT_1 ; PS51084 HIT_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 5.9 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSHSDNCIFCKIAAGAIPSRKVYEDDELFAFHDIHPWAPVHFLIIPKAHIPSMAQVGPEH CCCCCCEEEEEEECCCCCCCCCCCCCCEEEEECCCCCCCEEEEEEECCCCCCHHHCCCCC EGVLGRMMVLAPRLALELGCNPYPAGGFRILTNTGAEGGQEVHHLHFHVIGGPRPWLKG CCHHHHHHHHHHHHHEEECCCCCCCCCEEEEEECCCCCCCEEEEEEEEEECCCCCCCCC >Mature Secondary Structure SHSDNCIFCKIAAGAIPSRKVYEDDELFAFHDIHPWAPVHFLIIPKAHIPSMAQVGPEH CCCCCEEEEEEECCCCCCCCCCCCCCEEEEECCCCCCCEEEEEEECCCCCCHHHCCCCC EGVLGRMMVLAPRLALELGCNPYPAGGFRILTNTGAEGGQEVHHLHFHVIGGPRPWLKG CCHHHHHHHHHHHHHEEECCCCCCCCCEEEEEECCCCCCCEEEEEEEEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA