Definition | Polaromonas sp. JS666 chromosome, complete genome. |
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Accession | NC_007948 |
Length | 5,200,264 |
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The map label for this gene is 91786714
Identifier: 91786714
GI number: 91786714
Start: 836559
End: 836978
Strand: Direct
Name: 91786714
Synonym: Bpro_0812
Alternate gene names: NA
Gene position: 836559-836978 (Clockwise)
Preceding gene: 91786713
Following gene: 91786715
Centisome position: 16.09
GC content: 58.1
Gene sequence:
>420_bases ATGCGGCTGAAAAGTCCTGAATTTTTCCCGGCATTTCCCGCCGCCTTTCCTGCTGACTGGAGCCCCACTTTGGAAACCGA TCTGGCCGAATTTGAAATCAAGAGCAGCGGTGACCGCCTCTTCATGCATGTGCTGTATGGCCTGCACACACTGGCCTGGT TCAGCGGCGGCGTGTTTGCGGTCATCGCGCTCATTGCCAACTACATCCGGCGGGCCGACGAGACGGATGCGCTCTATATC GACCACCACAACTACATGATCCGCACATTCTGGTGGACGCTGCTGTGGCTGGTCCTGCTGTCGCCCTTGTGGCTGCTGTT GTTTTTGCCCGGCGCGATCGCTTATGGCATTGTCTGGCTCTGGTACCTGTACCGCTGCATCAAGGGCTGGATGCGCTTTA ACAGCCAGCGGCCGTCCTGA
Upstream 100 bases:
>100_bases CATTACGGCCTGCAGCCTGCCGACGTCATCGCTGAACTGGAGCGCCGCGAGGGCACCAGCGGCATCGAGGAAAAAGCGCT GCGCAAGGTGCAAAATCGGG
Downstream 100 bases:
>100_bases TTCCGGCCGCAGTGCCTTTCCAAAAAACCTTTCCTGACCCATCAACGACCGCATGAGCCACTCTGACAACTGCATTTTCT GCAAAATTGCCGCAGGCGCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 139; Mature: 139
Protein sequence:
>139_residues MRLKSPEFFPAFPAAFPADWSPTLETDLAEFEIKSSGDRLFMHVLYGLHTLAWFSGGVFAVIALIANYIRRADETDALYI DHHNYMIRTFWWTLLWLVLLSPLWLLLFLPGAIAYGIVWLWYLYRCIKGWMRFNSQRPS
Sequences:
>Translated_139_residues MRLKSPEFFPAFPAAFPADWSPTLETDLAEFEIKSSGDRLFMHVLYGLHTLAWFSGGVFAVIALIANYIRRADETDALYI DHHNYMIRTFWWTLLWLVLLSPLWLLLFLPGAIAYGIVWLWYLYRCIKGWMRFNSQRPS >Mature_139_residues MRLKSPEFFPAFPAAFPADWSPTLETDLAEFEIKSSGDRLFMHVLYGLHTLAWFSGGVFAVIALIANYIRRADETDALYI DHHNYMIRTFWWTLLWLVLLSPLWLLLFLPGAIAYGIVWLWYLYRCIKGWMRFNSQRPS
Specific function: Unknown
COG id: COG3671
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16366; Mature: 16366
Theoretical pI: Translated: 7.67; Mature: 7.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLKSPEFFPAFPAAFPADWSPTLETDLAEFEIKSSGDRLFMHVLYGLHTLAWFSGGVFA CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCHHHH VIALIANYIRRADETDALYIDHHNYMIRTFWWTLLWLVLLSPLWLLLFLPGAIAYGIVWL HHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH WYLYRCIKGWMRFNSQRPS HHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MRLKSPEFFPAFPAAFPADWSPTLETDLAEFEIKSSGDRLFMHVLYGLHTLAWFSGGVFA CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCHHHH VIALIANYIRRADETDALYIDHHNYMIRTFWWTLLWLVLLSPLWLLLFLPGAIAYGIVWL HHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH WYLYRCIKGWMRFNSQRPS HHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA