Definition | Polaromonas sp. JS666 chromosome, complete genome. |
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Accession | NC_007948 |
Length | 5,200,264 |
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The map label for this gene is hisB [H]
Identifier: 91786708
GI number: 91786708
Start: 832473
End: 833093
Strand: Direct
Name: hisB [H]
Synonym: Bpro_0806
Alternate gene names: 91786708
Gene position: 832473-833093 (Clockwise)
Preceding gene: 91786707
Following gene: 91786709
Centisome position: 16.01
GC content: 63.29
Gene sequence:
>621_bases ATGACCACCCCTTCCACTGCTCCGACCCCGGCCCCGCGCAAGGCGGAAGTCTCGCGCAACACCGCCGAGACCCAGATCAC CGTCAAGCTCAACCTGGACGGCACGGGCAAAGCCAGCCTGTCGACGGGCATCGGCTTTTTCGACCACATGCTGGACCAGA TCGCCCGCCACGGCCTGATCGACCTGGACATCCAGGCCAAGGGCGACCTGCACATTGATGGCCACCACACGGTGGAAGAC GTCGGCATCACCTTCGGACAGGCCGTGGCCCAGGCCGTCGGCGACAAAAAAGGCCTGCGCCGCTATGGCCACGCCTATGT GCCGCTGGACGAGGCCCTATCGCGCGTGGTGATCGATTTCTCGGGCCGCCCCGGCCTGGAAATGCATGTGCCCTTCAAGA GCGGCATGATAGGTACCTTTGACAGCCAGCTCGCCTATGAATTCTTCCAGGGTTTTGCCAACCATGCGTTTGTGACGCTG CACATTGACAACCTGCGTGGCGACAACGCCCATCATCAGGCCGAAACCGTGTTCAAGGCGTTTGCGCGGGCGCTGCGCAT GGCGCTGGAAATCGACCCGCGGTCGGCAGGCGTGATTCCGTCGACCAAGGGCTCGCTGTAG
Upstream 100 bases:
>100_bases ACGTTTCTAAAATGCATCCATTGCTGGCCAATTGTTTGCGCCTGACCGTCGGCACCGCGGACGAGAATACGCAAATGCTG GCGGCGCTTGAAAAATCCCT
Downstream 100 bases:
>100_bases GTGCCGGTGCGCCATGGATGGACCGTTCCCCGTTTTGGGTTTTCTGCCCCGCTAGAATGGACGTCAATAGCTCCTGAGTC CGTAGCAAATATCGATGAAT
Product: imidazoleglycerol-phosphate dehydratase
Products: NA
Alternate protein names: IGPD [H]
Number of amino acids: Translated: 206; Mature: 205
Protein sequence:
>206_residues MTTPSTAPTPAPRKAEVSRNTAETQITVKLNLDGTGKASLSTGIGFFDHMLDQIARHGLIDLDIQAKGDLHIDGHHTVED VGITFGQAVAQAVGDKKGLRRYGHAYVPLDEALSRVVIDFSGRPGLEMHVPFKSGMIGTFDSQLAYEFFQGFANHAFVTL HIDNLRGDNAHHQAETVFKAFARALRMALEIDPRSAGVIPSTKGSL
Sequences:
>Translated_206_residues MTTPSTAPTPAPRKAEVSRNTAETQITVKLNLDGTGKASLSTGIGFFDHMLDQIARHGLIDLDIQAKGDLHIDGHHTVED VGITFGQAVAQAVGDKKGLRRYGHAYVPLDEALSRVVIDFSGRPGLEMHVPFKSGMIGTFDSQLAYEFFQGFANHAFVTL HIDNLRGDNAHHQAETVFKAFARALRMALEIDPRSAGVIPSTKGSL >Mature_205_residues TTPSTAPTPAPRKAEVSRNTAETQITVKLNLDGTGKASLSTGIGFFDHMLDQIARHGLIDLDIQAKGDLHIDGHHTVEDV GITFGQAVAQAVGDKKGLRRYGHAYVPLDEALSRVVIDFSGRPGLEMHVPFKSGMIGTFDSQLAYEFFQGFANHAFVTLH IDNLRGDNAHHQAETVFKAFARALRMALEIDPRSAGVIPSTKGSL
Specific function: Histidine biosynthesis; sixth step. Histidine biosynthesis; eighth step. [C]
COG id: COG0131
COG function: function code E; Imidazoleglycerol-phosphate dehydratase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the imidazoleglycerol-phosphate dehydratase family [H]
Homologues:
Organism=Escherichia coli, GI87082027, Length=198, Percent_Identity=45.959595959596, Blast_Score=180, Evalue=6e-47, Organism=Saccharomyces cerevisiae, GI6324776, Length=218, Percent_Identity=38.9908256880734, Blast_Score=158, Evalue=6e-40,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000807 - InterPro: IPR020565 - InterPro: IPR020568 [H]
Pfam domain/function: PF00475 IGPD [H]
EC number: =4.2.1.19 [H]
Molecular weight: Translated: 22289; Mature: 22157
Theoretical pI: Translated: 6.93; Mature: 6.93
Prosite motif: PS00954 IGP_DEHYDRATASE_1 ; PS00955 IGP_DEHYDRATASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTPSTAPTPAPRKAEVSRNTAETQITVKLNLDGTGKASLSTGIGFFDHMLDQIARHGLI CCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCEE DLDIQAKGDLHIDGHHTVEDVGITFGQAVAQAVGDKKGLRRYGHAYVPLDEALSRVVIDF EEEEECCCCEEECCCCCHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCHHHHHHEEEEEE SGRPGLEMHVPFKSGMIGTFDSQLAYEFFQGFANHAFVTLHIDNLRGDNAHHQAETVFKA CCCCCCEEECCCCCCCCCCHHHHHHHHHHHHHHCCEEEEEEEECCCCCCCHHHHHHHHHH FARALRMALEIDPRSAGVIPSTKGSL HHHHHHHHHEECCCCCCCCCCCCCCC >Mature Secondary Structure TTPSTAPTPAPRKAEVSRNTAETQITVKLNLDGTGKASLSTGIGFFDHMLDQIARHGLI CCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCEE DLDIQAKGDLHIDGHHTVEDVGITFGQAVAQAVGDKKGLRRYGHAYVPLDEALSRVVIDF EEEEECCCCEEECCCCCHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCHHHHHHEEEEEE SGRPGLEMHVPFKSGMIGTFDSQLAYEFFQGFANHAFVTLHIDNLRGDNAHHQAETVFKA CCCCCCEEECCCCCCCCCCHHHHHHHHHHHHHHCCEEEEEEEECCCCCCCHHHHHHHHHH FARALRMALEIDPRSAGVIPSTKGSL HHHHHHHHHEECCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA